BAC Information

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BAC

Clone NameB6Ng01-194P15
Chromosome2 (Build37)
Map Location 167,882,015 - 168,023,600
singlet/doubletdoublet
Overlap genePard6b, Adnp
Upstream geneAI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik
Downstream geneDpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194P15.bB6Ng01-194P15.g
ACCGA017524GA017525
length1,166340
definitionB6Ng01-194P15.b B6Ng01-194P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(168,022,449 - 168,023,600)(167,882,015 - 167,882,354)
sequence
gaattcaacacatactgtttcttttctgggtagattctcagtcactcact
gcattttaccatcttttttagcaaatagcagctttattgacaaccctacc
tcaagaagtttgacattgaagtgtatatagcaaatcaggtatgttttggt
ctgtgaacacaactgaaagacaaaagttttgattcaagacaaatacgctt
ccaatctcagcagagttgggtgaatctctgagagtttgaagccagtctag
tctacaaagtaagttccaggcctccaggggtagtgaaactgtatcaagaa
aagggggttttggttttggttttggctgtaagttgtattcctgaaatggc
tctgttcccttcctttgctgtgtcctcagtagcttacctcatgtctaagg
cactagtggctttacagacctttagagaagaattgtgtcttagtgatact
ttgagttcttacattgactaattcctggtattaaaatgtcttcagaaggg
cttgctaggtggctcagcgggttagaacactgactgctcttccaaaggtc
ccgagttcaaatctcagcaaccacatggtggctcacaaccatctgtaatg
agatctgactccctcttctggtgtgtcagaagacagctacagtgtactta
tgtataataataaataaatctttgggccggagcaagcagaggtcccaaaa
ttcaaattcccaacaaccatctgtacagctacagtgtgtactcaaataca
taaaataaataaatctttttttaaaaaaaaatgtcttcagactttaacaa
atactactaaccagactagaactcttctaacgtacctttaaaatgccact
tctcaaatctcaggaatataccttagtccttgtctttgcttgtctaggtt
taatcacacacagacacacacacacacacgttagtttgtctgtgtgttac
aacttcttctttctatacctgtaagtagtcattagccacagactgtgttc
ctactttatcaatcagcccaatttttccagcatattttgcctttgcaagg
tggccttttcagattcagtgcaggacttgctagaacttggctttccctgc
cttctggcaccaatggccaaacagcctacatcaagaagatttttgtgaca
tagctgaacatagcct
tgttggcccctggtgtgtaggacttctgtgagatgtctgagtttgcgatg
agaccctcagctgcatctttcatgatctgatacgacacttctgtcatgtc
ctgtccccgcacccccccaccccgccaccgtgcatgcctgtctttgccat
agatttctagtaaactgctcaagtatgcacagcctaaattgaaccctgat
ggcggggcgcttgctcccgggcccctcttcaaagcctgatggtttacacg
gctctggaaacaacagggccagtgcgcagtttatttgggttggctggttt
cgtgctgctcggaatctgctttgggggttgggggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_168022449_168023600
seq2: B6Ng01-194P15.b_47_1212 (reverse)

seq1  AGGCTATGCCAGGCTATGTCACAAAAACCTTC-TGATGTA-GCTGTTGGG  48
      ||||||||    ||||||||||||||| |||| ||||||| |||||| ||
seq2  AGGCTATGTTCAGCTATGTCACAAAAATCTTCTTGATGTAGGCTGTTTGG  50

seq1  GCCATGGTGCCAGAA-GCAGGG-AAGCCAAGTTCTAGCAAGTCCTGCACT  96
       |  ||||||||||| |||||| |||||||||||||||||||||||||||
seq2  CCATTGGTGCCAGAAGGCAGGGAAAGCCAAGTTCTAGCAAGTCCTGCACT  100

seq1  GGATCTG-AAAGGCCACCCTGCAAAGGCAAAATATGCTGGAAAAA-TGGG  144
      | ||||| |||||||||| |||||||||||||||||||||||||| ||||
seq2  GAATCTGAAAAGGCCACCTTGCAAAGGCAAAATATGCTGGAAAAATTGGG  150

seq1  CTGA-TGATAAAGTAGGAACACAGTCTGT-GCT-ATGACTACTTACAGGT  191
      |||| |||||||||||||||||||||||| ||| ||||||||||||||||
seq2  CTGATTGATAAAGTAGGAACACAGTCTGTGGCTAATGACTACTTACAGGT  200

seq1  ATAGAAAG-AGAAGTTGT-ACACACAGACAAACTAACGTGTGTGTGTGTG  239
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  ATAGAAAGAAGAAGTTGTAACACACAGACAAACTAACGTGTGTGTGTGTG  250

seq1  TGTCTGTGTGTGATTAAACCTAGACAAGC-AAGACAAGGACTAAGGTATA  288
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTCTGTGTGTGATTAAACCTAGACAAGCAAAGACAAGGACTAAGGTATA  300

seq1  TTCCTGAGATTTGAGAAGTGGCATTTTAAAGGTACGTTAGAAGAGTTCTA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGATTTGAGAAGTGGCATTTTAAAGGTACGTTAGAAGAGTTCTA  350

seq1  GTCTGGTTAGTAGTATTTGTTAAAGTCTGAAGACA-TTTTTTTTAAAAAA  387
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTCTGGTTAGTAGTATTTGTTAAAGTCTGAAGACATTTTTTTTTAAAAAA  400

seq1  AGATTTATTTATTTTATGTATTTGAGTACACACTGTAGCTGTACAGATGG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTTATTTTATGTATTTGAGTACACACTGTAGCTGTACAGATGG  450

seq1  TTGTTGGGAA-TTGAATTTTGGGACCTCTGCTTGCTCCGGCCCAAAGATT  486
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGGAATTTGAATTTTGGGACCTCTGCTTGCTCCGGCCCAAAGATT  500

seq1  TATTTATTATTATACATAAGTACACTGTAGCTGTCTTCTGACACACCAGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTATTATACATAAGTACACTGTAGCTGTCTTCTGACACACCAGA  550

seq1  AGAGGGAGTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGC  600

seq1  TGAGATTTGAACTCGGGACCTTTGGAAGAGCAGTCAGTGTTCTAACCCGC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTGAACTCGGGACCTTTGGAAGAGCAGTCAGTGTTCTAACCCGC  650

seq1  TGAGCCACCTAGCAAGCCCTTCTGAAGACATTTTAATACCAGGAATTAGT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCTAGCAAGCCCTTCTGAAGACATTTTAATACCAGGAATTAGT  700

seq1  CAATGTAAGAACTCAAAGTATCACTAAGACACAATTCTTCTCTAAAGGTC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAAGAACTCAAAGTATCACTAAGACACAATTCTTCTCTAAAGGTC  750

seq1  TGTAAAGCCACTAGTGCCTTAGACATGAGGTAAGCTACTGAGGACACAGC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCCACTAGTGCCTTAGACATGAGGTAAGCTACTGAGGACACAGC  800

seq1  AAAGGAAGGGAACAGAGCCATTTCAGGAATACAACTTACAGCCAAAACCA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGGAACAGAGCCATTTCAGGAATACAACTTACAGCCAAAACCA  850

seq1  AAACCAAAACCCCCTTTTCTTGATACAGTTTCACTACCCCTGGAGGCCTG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAACCCCCTTTTCTTGATACAGTTTCACTACCCCTGGAGGCCTG  900

seq1  GAACTTACTTTGTAGACTAGACTGGCTTCAAACTCTCAGAGATTCACCCA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTACTTTGTAGACTAGACTGGCTTCAAACTCTCAGAGATTCACCCA  950

seq1  ACTCTGCTGAGATTGGAAGCGTATTTGTCTTGAATCAAAACTTTTGTCTT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTGAGATTGGAAGCGTATTTGTCTTGAATCAAAACTTTTGTCTT  1000

seq1  TCAGTTGTGTTCACAGACCAAAACATACCTGATTTGCTATATACACTTCA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTGTTCACAGACCAAAACATACCTGATTTGCTATATACACTTCA  1050

seq1  ATGTCAAACTTCTTGAGGTAGGGTTGTCAATAAAGCTGCTATTTGCTAAA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAAACTTCTTGAGGTAGGGTTGTCAATAAAGCTGCTATTTGCTAAA  1100

seq1  AAAGATGGTAAAATGCAGTGAGTGACTGAGAATCTACCCAGAAAAGAAAC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGTAAAATGCAGTGAGTGACTGAGAATCTACCCAGAAAAGAAAC  1150

seq1  AGTATGTGTTGAATTC  1152
      ||||||||||||||||
seq2  AGTATGTGTTGAATTC  1166

seq1: chr2_167882015_167882354
seq2: B6Ng01-194P15.g_70_409

seq1  TGTTGGCCCCTGGTGTGTAGGACTTCTGTGAGATGTCTGAGTTTGCGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCCCCTGGTGTGTAGGACTTCTGTGAGATGTCTGAGTTTGCGATG  50

seq1  AGACCCTCAGCTGCATCTTTCATGATCTGATACGACACTTCTGTCATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTCAGCTGCATCTTTCATGATCTGATACGACACTTCTGTCATGTC  100

seq1  CTGTCCCCGCACCCCCCCACCCCGCCACCGTGCATGCCTGTCTTTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCCGCACCCCCCCACCCCGCCACCGTGCATGCCTGTCTTTGCCAT  150

seq1  AGATTTCTAGTAAACTGCTCAAGTATGCACAGCCTAAATTGAACCCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTAGTAAACTGCTCAAGTATGCACAGCCTAAATTGAACCCTGAT  200

seq1  GGCGGGGCGCTTGCTCCCGGGCCCCTCTTCAAAGCCTGATGGTTTACACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCGCTTGCTCCCGGGCCCCTCTTCAAAGCCTGATGGTTTACACG  250

seq1  GCTCTGGAAACAACAGGGCCAGTGCGCAGTTTATTTGGGTTGGCTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGAAACAACAGGGCCAGTGCGCAGTTTATTTGGGTTGGCTGGTTT  300

seq1  CGTGCTGCTCGGAATCTGCTTTGGGGGTTGGGGGGGAGGG  340
      ||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTGCTCGGAATCTGCTTTGGGGGTTGGGGGGGAGGG  340