BAC Information

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BAC

Clone NameB6Ng01-195N14
Chromosome2 (Build37)
Map Location 153,594,052 - 153,763,396
singlet/doubletdoublet
Overlap geneMapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870
Upstream geneBcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932
Downstream geneGm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N14.bB6Ng01-195N14.g
ACCGA018153GA018154
length1,1361,074
definitionB6Ng01-195N14.b B6Ng01-195N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,762,270 - 153,763,396)(153,594,052 - 153,595,115)
sequence
gaattcacgtgtacagcaaagctgagagaaccatccagtgagtgccacac
accagccagctctcgtcagcctcaccaacatctgcattccgtgcatggta
cctgctctgtcacattttttaatccaaccatggagcctcaagttcaccat
gtagcagaggataacctaagcatcctgcattcacctcgctgggattgcag
ccagtcaccaccatacttggtctgtgtgatgctgtggattgaatccaaga
ctttctacacgacactagtgagccctcggacctctgattttgtgctgaca
gccgactgtgacactacccacctccacacacaggctacgattttgtatat
aaatttccacagtgaaaacccgagcctatgatgattttatgtatttgtgt
agcctgcatctcaccacactatagaacattccctcactcaaagttcccac
cttcctttcccccatcactccctattcccatagaggcaccagttgcccag
tcttctacccaggcttcccttgacacccaagactccacccccaccccgtc
ttctccttatgctctcacctgctccttgtcacgccccctgcctttggacc
tttgcacatgccagtcctgccatctacctgccttttactccccctctgga
ccactcagacatccctggacccatctgagatgtgaattctccaggaaaat
caggagggtgaccagctcagagcccagcataagtgcagttgccagtgtaa
ccacaaatgatgaccgagccccaactggcctgagcactcactgaggcctt
ctgctgcccgcacccagcccagcccaggcccagttttcacacctgttttt
ttaccacctcctccaggccccagccttcccactcactacttcaaagagcc
agggttgttctctctcctaccccggcaagcctcgggtccttcattggcca
gccttccccaagagatgctttctgccctttccctaccagttaaaggtgcc
tttgaggcaggtggcatatatattttgaatcctggacagcttggcctggt
gtcagccacagcatcatctgtttttcctgggtcaggcctccttcttgggg
actcagttttccccgtacagcaggattggttattaa
gaattcagaggaaaatccaggctcagtgattaacaatgccaaaaaaagaa
aaaaaaaaaacaaacaaaaagcaagtaacgagccattgttcaaacgacag
cggtgctgtttctcctctgtggcctttcagacttctgttgcccccaaatt
ccattttattgggaacccattttccacctggtctttcttgacagggtttt
tttctactttaaacagtttttaaataaaattctgtatttcaagagtgtcc
tgtcttctgaaatgtgtcttgccttgggtataagcttttaattctagagg
taagatagctatgcatccatctttggctgagcttagacagaggctgagaa
atgattcccaccgtcttaaataggactaatcttttaaaatccctcacttt
tctcaagctaactaatctggctctccccttcctctatcctcctttctcct
tctcccttccttcctccctctttttcctcttcctccctccttttggtttt
taagacagagcttttagtattgttgtcctgattggcctcatatttgtcac
agtccttcttcctcattctcttgaaagattatgtgtgtgtgccatcgtgc
ctggcttaaaattgcttattttgaattctttttaaaaaaaaaaatcacat
tacatttttcagtcttctactgctttaaattcctgttaccctgagaaggt
tttcctcacagaaacagaaagcctgacctagttgcttaaggctctttagg
aatgtagttggccggtgtttggcagatgatttaattggaggtaattgttt
catttgtcctgaaaatgcatttacaaagtcagtttagtacactcttaaac
tggagagtaaagttgttgcttcttaaaactgttctataaagtcctacacc
ttttgaagaatgagttgaaaatatgatcctctcctgttgttgttcttgaa
atgttaaataaggcagaaaggtaattcatctgctctttgagagtaccatg
tacagtaccctggctgctgtggaagtgatcttggagagtaccacggtaca
gtactctgggctgctgtggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153762270_153763396
seq2: B6Ng01-195N14.b_46_1181 (reverse)

seq1  TTAATAACTCTATTAACATACCTGCTGTACGGGG-AAACTGAGTCCCAAA  49
      ||||||||        ||  |||||||||||||| |||||||||||| ||
seq2  TTAATAAC--------CAATCCTGCTGTACGGGGAAAACTGAGTCCCCAA  42

seq1  G-AGGA-GCCTGA-CCAGG-AAAACAGATGATGCTGT-GCTGACA-CAAG  93
      | |||| |||||| ||||| ||||||||||||||||| ||||||| || |
seq2  GAAGGAGGCCTGACCCAGGAAAAACAGATGATGCTGTGGCTGACACCAGG  92

seq1  CCAAGCTTGTCAGGATTCAA---ATATATGCCACCTGCCTTCAAAGCACC  140
      |||||||   ||||||||||   |||||||||||||||||  || |||||
seq2  CCAAGCTGTCCAGGATTCAAAATATATATGCCACCTGCCTCAAAGGCACC  142

seq1  TTT-ACTGGTAGGG-AAGGGCAGAAAGCATCTCTTGGGG-AGGCTGG-CA  186
      ||| |||||||||| |||||||||||||||||||||||| ||||||| ||
seq2  TTTAACTGGTAGGGAAAGGGCAGAAAGCATCTCTTGGGGAAGGCTGGCCA  192

seq1  ATGAAGGA-CCGAGGCTTGCCGGGGTAGGAGAGAGAAC-ACCCTGGCTCT  234
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  ATGAAGGACCCGAGGCTTGCCGGGGTAGGAGAGAGAACAACCCTGGCTCT  242

seq1  TTGAAGTAGTGAGTGGGAAGGCTGGGGCCTGGAGGAGGTGGT-AAAAAAC  283
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGAAGTAGTGAGTGGGAAGGCTGGGGCCTGGAGGAGGTGGTAAAAAAAC  292

seq1  AGGTGTGAAAACTGGGCCTGGGCTGGGCTGGGTGCGGGCAGCAGAAGGCC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAAAACTGGGCCTGGGCTGGGCTGGGTGCGGGCAGCAGAAGGCC  342

seq1  TCAGTGAGTGCTCAGGCCAGTTGGGGCTCGGTCATCATTTGTGGTTACAC  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGTGCTCAGGCCAGTTGGGGCTCGGTCATCATTTGTGGTTACAC  392

seq1  TGGCAACTGCACTTATGCTGGGCTCTGAGCTGGTCACCCTCCTGATTTTC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACTGCACTTATGCTGGGCTCTGAGCTGGTCACCCTCCTGATTTTC  442

seq1  CTGGAGAATTCACATCTCAGATGGGTCCAGGGATGTCTGAGTGGTCCAGA  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAATTCACATCTCAGATGGGTCCAGGGATGTCTGAGTGGTCCAGA  492

seq1  GGGGGAGTAAAAGGCAGGTAGATGGCAGGACTGGCATGTGCAAAGGTCCA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGTAAAAGGCAGGTAGATGGCAGGACTGGCATGTGCAAAGGTCCA  542

seq1  AAGGCAGGGGGCGTGACAAGGAGCAGGTGAGAGCATAAGGAGAAGACGGG  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGGGGCGTGACAAGGAGCAGGTGAGAGCATAAGGAGAAGACGGG  592

seq1  GTGGGGGTGGAGTCTTGGGTGTCAAGGGAAGCCTGGGTAGAAGACTGGGC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTGGAGTCTTGGGTGTCAAGGGAAGCCTGGGTAGAAGACTGGGC  642

seq1  AACTGGTGCCTCTATGGGAATAGGGAGTGATGGGGGAAAGGAAGGTGGGA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTGCCTCTATGGGAATAGGGAGTGATGGGGGAAAGGAAGGTGGGA  692

seq1  ACTTTGAGTGAGGGAATGTTCTATAGTGTGGTGAGATGCAGGCTACACAA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAGTGAGGGAATGTTCTATAGTGTGGTGAGATGCAGGCTACACAA  742

seq1  ATACATAAAATCATCATAGGCTCGGGTTTTCACTGTGGAAATTTATATAC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAAATCATCATAGGCTCGGGTTTTCACTGTGGAAATTTATATAC  792

seq1  AAAATCGTAGCCTGTGTGTGGAGGTGGGTAGTGTCACAGTCGGCTGTCAG  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCGTAGCCTGTGTGTGGAGGTGGGTAGTGTCACAGTCGGCTGTCAG  842

seq1  CACAAAATCAGAGGTCCGAGGGCTCACTAGTGTCGTGTAGAAAGTCTTGG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATCAGAGGTCCGAGGGCTCACTAGTGTCGTGTAGAAAGTCTTGG  892

seq1  ATTCAATCCACAGCATCACACAGACCAAGTATGGTGGTGACTGGCTGCAA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCCACAGCATCACACAGACCAAGTATGGTGGTGACTGGCTGCAA  942

seq1  TCCCAGCGAGGTGAATGCAGGATGCTTAGGTTATCCTCTGCTACATGGTG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCGAGGTGAATGCAGGATGCTTAGGTTATCCTCTGCTACATGGTG  992

seq1  AACTTGAGGCTCCATGGTTGGATTAAAAAATGTGACAGAGCAGGTACCAT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGGCTCCATGGTTGGATTAAAAAATGTGACAGAGCAGGTACCAT  1042

seq1  GCACGGAATGCAGATGTTGGTGAGGCTGACGAGAGCTGGCTGGTGTGTGG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGAATGCAGATGTTGGTGAGGCTGACGAGAGCTGGCTGGTGTGTGG  1092

seq1  CACTCACTGGATGGTTCTCTCAGCTTTGCTGTACACGTGAATTC  1127
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACTGGATGGTTCTCTCAGCTTTGCTGTACACGTGAATTC  1136

seq1: chr2_153594052_153595115
seq2: B6Ng01-195N14.g_67_1140

seq1  GAATTCAGAGGAAAATCCAGGCTCAGTGATTAACAATGCCAAAAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGAAAATCCAGGCTCAGTGATTAACAATGCCAAAAAAAGAA  50

seq1  AAAAAAAAAACAAACAAAAAGCAAGTAACGAGCCATTGTTCAAACGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAAACAAAAAGCAAGTAACGAGCCATTGTTCAAACGACAG  100

seq1  CGGTGCTGTTTCTCCTCTGTGGCCTTTCAGACTTCTGTTGCCCCCAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCTGTTTCTCCTCTGTGGCCTTTCAGACTTCTGTTGCCCCCAAATT  150

seq1  CCATTTTATTGGGAACCCATTTTCCACCTGGTCTTTCTTGACAGGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATTGGGAACCCATTTTCCACCTGGTCTTTCTTGACAGGGTTTT  200

seq1  TTTCTACTTTAAACAGTTTTTAAATAAAATTCTGTATTTCAAGAGTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTTAAACAGTTTTTAAATAAAATTCTGTATTTCAAGAGTGTCC  250

seq1  TGTCTTCTGAAATGTGTCTTGCCTTGGGTATAAGCTTTTAATTCTAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTGAAATGTGTCTTGCCTTGGGTATAAGCTTTTAATTCTAGAGG  300

seq1  TAAGATAGCTATGCATCCATCTTTGGCTGAGCTTAGACAGAGGCTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGCTATGCATCCATCTTTGGCTGAGCTTAGACAGAGGCTGAGAA  350

seq1  ATGATTCCCACCGTCTTAAATAGGACTAATCTTTTAAAATCCCTCACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCCACCGTCTTAAATAGGACTAATCTTTTAAAATCCCTCACTTT  400

seq1  TCTCAAGCTAACTAATCTGGCTCTCCCCTTCCTCTATCCTCCTTTCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCTAACTAATCTGGCTCTCCCCTTCCTCTATCCTCCTTTCTCCT  450

seq1  TCTCCCTTCCTTCCTCCCTCTTTTTCCTCTTCCTCCCTCCTTTTGGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCCTTCCTCCCTCTTTTTCCTCTTCCTCCCTCCTTTTGGTTTT  500

seq1  TAAGACAGAGCTTTTAGTATTGTTGTCCTGATTGGCCTCATATTTGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAGCTTTTAGTATTGTTGTCCTGATTGGCCTCATATTTGTCAC  550

seq1  AGTCCTTCTTCCTCATTCTCTTGAAAGATTATGTGTGTGTGCCATCGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCTTCCTCATTCTCTTGAAAGATTATGTGTGTGTGCCATCGTGC  600

seq1  CTGGCTTAAAATTGCTTATTTTGAATTCTTTTTAAAAAAAAAAATCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTAAAATTGCTTATTTTGAATTCTTTTTAAAAAAAAAAATCACAT  650

seq1  TACATTTTTCAGTCTTCTACTGCTTTAAATTCCTGTTACCCTGAGAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTCAGTCTTCTACTGCTTTAAATTCCTGTTACCCTGAGAAGGT  700

seq1  TTTCCTCACAGAAACAGAAAGCCTGACCTAGTTGCTTAAGGCTC-TTAGG  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTCCTCACAGAAACAGAAAGCCTGACCTAGTTGCTTAAGGCTCTTTAGG  750

seq1  AATGTAGTTGGCCGGTGTTTGGCAGATGATTTAATTGGAGGTAATTGTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTTGGCCGGTGTTTGGCAGATGATTTAATTGGAGGTAATTGTTT  800

seq1  CA-TTGTCCTGAAAATGCATTTACAAAGTCAG-TTAGTACACTCTTAAAC  847
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATTTGTCCTGAAAATGCATTTACAAAGTCAGTTTAGTACACTCTTAAAC  850

seq1  TGGAGAGTAAAGTTGTTGCTTCTTAAAACTGTTCTATAAAGTCCTACACC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTAAAGTTGTTGCTTCTTAAAACTGTTCTATAAAGTCCTACACC  900

seq1  TTT--GAGAATGAGTTGAAAATATGATCCTCTCCTGTTGTTG-TCTTGAA  944
      |||   |||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTGAAGAATGAGTTGAAAATATGATCCTCTCCTGTTGTTGTTCTTGAA  950

seq1  ATGTTAAAT-AGGCAGAAAGGTAATTCATCTGCTC-TTGAGAGTACCATG  992
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  ATGTTAAATAAGGCAGAAAGGTAATTCATCTGCTCTTTGAGAGTACCATG  1000

seq1  TACAGTACCCTGGCTGCTGTGGAAGTGATCTT-GAGAGTACCAC-GTACA  1040
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  TACAGTACCCTGGCTGCTGTGGAAGTGATCTTGGAGAGTACCACGGTACA  1050

seq1  GTACTCT-GGCTGCTGTGGAAGTGG  1064
      ||||||| ||||||||||| |||||
seq2  GTACTCTGGGCTGCTGTGG-AGTGG  1074