BAC Information

Click to search

BAC

Clone NameB6Ng01-196D04
Chromosome2 (Build37)
Map Location 15,977,327 - 15,978,529
singlet/doubletsinglet
Overlap genenone
Upstream geneArl5b, LOC633061, LOC667329, LOC227588, LOC625457
Downstream genePlxdc2, 4930515L03Rik, LOC383665
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196D04.bB6Ng01-196D04.g
ACCGA018399GA018400
length1,1981,161
definitionB6Ng01-196D04.b B6Ng01-196D04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttttgaaggagaggtatattacatactattttttaaaacc
attagacagctttataagaagaagaaaaagaggagaattttcttcagttt
aaaacagagtgaattcggatcatttaatgtggcaaattgtctcttatgat
ttaaccagagagtaaatgagcatattttttatttggcagaagactcatga
aaatagagattcctttatgagtattaactgttcttctaaaaaagaaatgt
caaattataatttgacacaataattcactgaaatattttaaatataagat
agtactttctcatatctaaaagacaatttaggctttttatcttttgctca
taaagaatggccatgaaatgtgatatatatatatatgttatatgtatata
ttacattatttctaatacatgtatgcatatatatgtgtaatatattgctt
gctttgcagtaggaaattatcattgtcacttgagaaaagcacactgcaat
gttgaatgcatactacttatatgtgacattaagtggtcaccaattttcaa
aactattcaattgcttaattagttgttaaaatagcagtttaatattacta
agaaatctgtccctattctttatggtaaccaattagttgtcaaacataag
aatatttgcacgtataatctcagaagcttgcaattataaaacattaagtg
aagtcctgaactgcaagtgtgcagaaaatatttaggaagaatgaggagta
aaatttagaaatacttactgaaaacatctttcagaatattgcatcctggt
aaacttaattgagctatgacaggttgtataagatcaggtgagaatctgaa
atagaagctcctggacagctccaaagcaaataatcaaagaattttgcctt
tgaaactatgtctccctgaatgctattgatcattccacacagcttcatgt
aagtaatggaaatgaactggtttaacgatttctattgaatttcccaatat
gttctggcaagttgaagacattaacaactcttttttctgtaacatttttt
ttaactgttaagtgtgtctgcactgattcatcatagaaattggctgcaag
ttttgtgtgagtctcacaaaacgtgttttgagtgtgttaaaaccccttcc
gtatctctgcttcctatccaagtctctcacctaaaacaattaactgtg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaagcagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
gggacgcagatgtagctgtctcttgtgaaactatgccggggctcagcaaa
acacagaagtggatgctcacagttcagctaatggaatggatcatagggct
cccaatgggagggagctagagaaagtagccaagggagctaaagggattct
tgcaacctataaggttggaacacatttatgagcttaacagtacccggaac
ttcttgaactctagctgcaattatttattcaaaaggaatgtctagtcggc
catcactgtaaagaagagccatttgggaactttgcaaactttatatagtg
ccaagtactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15977327_15978529
seq2: B6Ng01-196D04.b_44_1241

seq1  GAATTCTCTGTTTTGAAGGAGAGGTATATTACATACTATTTTTTAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTTGAAGGAGAGGTATATTACATACTATTTTTTAAAACC  50

seq1  ATTAGACAGCTTTATAAGAAGAAGAAAAAGAGGAGAATTTTCTTCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACAGCTTTATAAGAAGAAGAAAAAGAGGAGAATTTTCTTCAGTTT  100

seq1  AAAACAGAGTGAATTCGGATCATTTAATGTGGCAAATTGTCTCTTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAGTGAATTCGGATCATTTAATGTGGCAAATTGTCTCTTATGAT  150

seq1  TTAACCAGAGAGTAAATGAGCATATTTTTTATTTGGCAGAAGACTCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGAGAGTAAATGAGCATATTTTTTATTTGGCAGAAGACTCATGA  200

seq1  AAATAGAGATTCCTTTATGAGTATTAACTGTTCTTCTAAAAAAGAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAGATTCCTTTATGAGTATTAACTGTTCTTCTAAAAAAGAAATGT  250

seq1  CAAATTATAATTTGACACAATAATTCACTGAAATATTTTAAATATAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATAATTTGACACAATAATTCACTGAAATATTTTAAATATAAGAT  300

seq1  AGTACTTTCTCATATCTAAAAGACAATTTAGGCTTTTTATCTTTTGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTTCTCATATCTAAAAGACAATTTAGGCTTTTTATCTTTTGCTCA  350

seq1  TAAAGAATGGCCATGAAATGTGATATATATATATATGTTATATGTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATGGCCATGAAATGTGATATATATATATATGTTATATGTATATA  400

seq1  TTACATTATTTCTAATACATGTATGCATATATATGTGTAATATATTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTATTTCTAATACATGTATGCATATATATGTGTAATATATTGCTT  450

seq1  GCTTTGCAGTAGGAAATTATCATTGTCACTTGAGAAAAGCACACTGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCAGTAGGAAATTATCATTGTCACTTGAGAAAAGCACACTGCAAT  500

seq1  GTTGAATGCATACTACTTATATGTGACATTAAGTGGTCACCAATTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGCATACTACTTATATGTGACATTAAGTGGTCACCAATTTTCAA  550

seq1  AACTATTCAATTGCTTAATTAGTTGTTAAAATAGCAGTTTAATATTACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCAATTGCTTAATTAGTTGTTAAAATAGCAGTTTAATATTACTA  600

seq1  AGAAATCTGTCCCTATTCTTTATGGTAACCAATTAGTTGTCAAACATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGTCCCTATTCTTTATGGTAACCAATTAGTTGTCAAACATAAG  650

seq1  AATATTTGCACGTATAATCTCAGAAGCTTGCAATTATAAAACATTAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCACGTATAATCTCAGAAGCTTGCAATTATAAAACATTAAGTG  700

seq1  AAGTCCTGAACTGCAAGTGTGCAGAAAATATTTAGGAAGAATGAGGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTGAACTGCAAGTGTGCAGAAAATATTTAGGAAGAATGAGGAGTA  750

seq1  AAATTTAGAAATACTTACTGAAAACATCTTTCAGAATATTGCATCCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGAAATACTTACTGAAAACATCTTTCAGAATATTGCATCCTGGT  800

seq1  AAACTTAATTGAGCTATGACAGGTTGTATAAGATCAGGTGAGAATCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAATTGAGCTATGACAGGTTGTATAAGATCAGGTGAGAATCTGAA  850

seq1  ATAGAAGCTCCTGGACAGCTCCAAAGCAAATAATCAAAGAATTTTGCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCTCCTGGACAGCTCCAAAGCAAATAATCAAAGAATTTTGCCTT  900

seq1  TGAAACTATGTCTCCCTGAATGCTATTGATCATTCCACACAGCTTCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTATGTCTCCCTGAATGCTATTGATCATTCCACACAGCTTCATGT  950

seq1  AAGTAATGGAAATGAACTGGTTTAACGATTTCTATTGAA-TTCCCAATAT  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGTAATGGAAATGAACTGGTTTAACGATTTCTATTGAATTTCCCAATAT  1000

seq1  GTCCTGGC-AGTTG-AGACATTAAC-ACTCTTTTTTCCTGTAACA-TTTT  1045
      || ||||| ||||| |||||||||| |||||||||| |||||||| ||||
seq2  GTTCTGGCAAGTTGAAGACATTAACAACTCTTTTTT-CTGTAACATTTTT  1049

seq1  TTTAACTGTTTAGTGTGTCTGCACTGATTCATCATTAGAATTGGTTGCAA  1095
      |||||||||| ||||||||||||||||||||||||   |||||| |||||
seq2  TTTAACTGTTAAGTGTGTCTGCACTGATTCATCATAGAAATTGGCTGCAA  1099

seq1  GTTTTGTTGTTGAGTCTCACAAAACGGTGTTTTGAGTTGTGGTAAAACCC  1145
      |||||||   ||||||||||||||| |||||||||| |||| ||||||||
seq2  GTTTTGT--GTGAGTCTCACAAAAC-GTGTTTTGAG-TGTGTTAAAACCC  1145

seq1  CTCCCCTTATCCTCTTGTCTTCCTCATCCACAAGT-TCTCACCTAAAAC-  1193
      ||  || ||| ||||   |||||| |||  ||||| ||||||||||||| 
seq2  CT-TCCGTAT-CTCT--GCTTCCT-ATC--CAAGTCTCTCACCTAAAACA  1188

seq1  ATTAACTGTG  1203
      ||||||||||
seq2  ATTAACTGTG  1198