BAC Information

Click to search

BAC

Clone NameB6Ng01-197A07
Chromosome2 (Build37)
Map Location 112,403,551 - 112,404,639
singlet/doubletsinglet
Overlap geneAven
Upstream geneOlfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream geneRyr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197A07.bB6Ng01-197A07.g
ACCGA019003GA019004
length1,2631,094
definitionB6Ng01-197A07.b B6Ng01-197A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgtcgtacttctctagctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcaatccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtagtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacacccccatga
ggctatagtgcatgcttggcagcagatggcattgtaacaggaatagaaac
cataggcatttgagcaacttcttccatgttacttgctttgtgctttcagg
acctgctcctggcccgatcaccgtattttaccacttcaatttggataata
gaactgctgctgtgccacgtcccacctttatggacctgcagggtctgaat
agatacccagctcattgatgggcatgttcaggtccgcatagtgaccttgg
ggtctctattggctagcgctccgttcacactaggccccacatagacacag
cgcacagagagct
gaattccatctgcacattttaaacagaagtctttattctcattcatttac
ttctttggtgtcactgaatactaatatgtgtcaaaaagtatgaatgaaac
gcgtaactcatgctttcaatagacgatgggtttggggccagtgagatggc
tcagtgggtgaaggtgcatactgctaagcatgatttgagtttgatcatca
ggcccacatggtgggaggaagactagctctgacaaactgttctctgactg
tcacacgggtgctgtcacacgtgaccacaaccccctatgcctgcccaaat
aaaatgtaaaataaaaaaaattaaagatttgaaaaatgatagatttggat
gaaaagttccttctactcatgtgaggtttctgtttgaagccatttaaaaa
caaagtttgtagggcagtgtcatgtagggactggatcataaagggcctct
tgtgctgcgcctgctttgtgaatattgaagttgagaagcagtaaagagcc
gttgtaagtgaggatgagactgagacatgcaggtaggtctgcagcaaggg
acccagggagcaggcttttgtaataagccaggaatgatgagggcctagca
tgagaccctgaggatacagacaaacaactttccccataatgcctgcttta
tcagattcctgggagctgaggctgtttctgtggtaacatagatggtggat
gcaccattactcaggatagcagcttgttcttgtggagtgtctcttgtgga
tgcatccagagacagaatactaggatttacagcaaaattgacattgaagg
tgtaattttagacacagcagacagtggcatgagccctgctcctcggagag
tagccccccatgctctgatcacagataagctcgggactcagcgcatctgg
tctgaggagtaaaattttggaattttgtaataacaaatttcttctaatta
gctcacccatggatttttctgtttcattggagttaatacttgtgtttcac
gggacagcttttgctcattatgtgctgtggagaattgtcgactgctgtac
caggcttatatgtgctgtaaatatttcctacaacattttgcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112403551_112404639
seq2: B6Ng01-197A07.g_66_1159

seq1  GAATTCCATCTGCACATTTTAAACAGAAGTCTTTATTCTCATTCATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGCACATTTTAAACAGAAGTCTTTATTCTCATTCATTTAC  50

seq1  TTCTTTGGTGTCACTGAATACTAATATGTGTCAAAAAGTATGAATGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGTGTCACTGAATACTAATATGTGTCAAAAAGTATGAATGAAAC  100

seq1  GCGTAACTCATGCTTTCAATAGACGATGGGTTTGGGGCCAGTGAGATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAACTCATGCTTTCAATAGACGATGGGTTTGGGGCCAGTGAGATGGC  150

seq1  TCAGTGGGTGAAGGTGCATACTGCTAAGCATGATTTGAGTTTGATCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGTGAAGGTGCATACTGCTAAGCATGATTTGAGTTTGATCATCA  200

seq1  GGCCCACATGGTGGGAGGAAGACTAGCTCTGACAAACTGTTCTCTGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACATGGTGGGAGGAAGACTAGCTCTGACAAACTGTTCTCTGACTG  250

seq1  TCACACGGGTGCTGTCACACGTGACCACAACCCCCTATGCCTGCCCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACGGGTGCTGTCACACGTGACCACAACCCCCTATGCCTGCCCAAAT  300

seq1  AAAATGTAAAATAAAAAAAATTAAAGATTTGAAAAATGATAGATTTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAAAATAAAAAAAATTAAAGATTTGAAAAATGATAGATTTGGAT  350

seq1  GAAAAGTTCCTTCTACTCATGTGAGGTTTCTGTTTGAAGCCATTTAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTCCTTCTACTCATGTGAGGTTTCTGTTTGAAGCCATTTAAAAA  400

seq1  CAAAGTTTGTAGGGCAGTGTCATGTAGGGACTGGATCATAAAGGGCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTGTAGGGCAGTGTCATGTAGGGACTGGATCATAAAGGGCCTCT  450

seq1  TGTGCTGCGCCTGCTTTGTGAATATTGAAGTTGAGAAGCAGTAAAGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGCGCCTGCTTTGTGAATATTGAAGTTGAGAAGCAGTAAAGAGCC  500

seq1  GTTGTAAGTGAGGATGAGACTGAGACATGCAGGTAGGTCTGCAGCAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAAGTGAGGATGAGACTGAGACATGCAGGTAGGTCTGCAGCAAGGG  550

seq1  ACCCAGGGAGCAGGCTTTTGTAATAAGCCAGGAATGATGAGGGCCTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGAGCAGGCTTTTGTAATAAGCCAGGAATGATGAGGGCCTAGCA  600

seq1  TGAGACCCTGAGGATACAGACAAACAACTTTCCCCATAATGCCTGCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCCTGAGGATACAGACAAACAACTTTCCCCATAATGCCTGCTTTA  650

seq1  TCAGATTCCTGGGAGCTGAGGCTGTTTCTGTGGTAACATAGATGGTGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCCTGGGAGCTGAGGCTGTTTCTGTGGTAACATAGATGGTGGAT  700

seq1  GCACCATTACTCAGGATAGCAGCTTGTTCTTGTGGAGTGTCTCTTGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTACTCAGGATAGCAGCTTGTTCTTGTGGAGTGTCTCTTGTGGA  750

seq1  TGCATCCAGAGACAGAATACTAGGATTTACAGCAAAATTGACATTG-AGG  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCATCCAGAGACAGAATACTAGGATTTACAGCAAAATTGACATTGAAGG  800

seq1  TGTAA-TTTAGACACAGCAGACAGTGGCATGAGCCCTGCTCCTCGGAGAG  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTAGACACAGCAGACAGTGGCATGAGCCCTGCTCCTCGGAGAG  850

seq1  TAGCCCCCCATGCTCTGATCACAGATAAGCTCGGGACTCAGCGCATCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCCCATGCTCTGATCACAGATAAGCTCGGGACTCAGCGCATCTGG  900

seq1  TCTGAGGAGTAAAATTTTGGAATTTTGTAATAACAAATTTCTTCTAATTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGAGTAAAATTTTGGAATTTTGTAATAACAAATTTCTTCTAATTA  950

seq1  GCTCACCCATGGA-TTTTCTGTTTCATTGGAGTTTATACTTGTGTTTCAC  997
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  GCTCACCCATGGATTTTTCTGTTTCATTGGAGTTAATACTTGTGTTTCAC  1000

seq1  GGGACAGCTTTTGCTCATTATTGTTGCTGTGGAG-ATTGTCGACTGCTGT  1046
      |||||||||||||||||||||   |||||||||| |||||||||||||||
seq2  GGGACAGCTTTTGCTCATTAT--GTGCTGTGGAGAATTGTCGACTGCTGT  1048

seq1  ACCAGGCTAATATGTGCTGTAAATATT--CTCACACA-TTTGCATG  1089
      |||||||| ||||||||||||||||||  ||   ||| ||||||||
seq2  ACCAGGCTTATATGTGCTGTAAATATTTCCTACAACATTTTGCATG  1094