BAC Information

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BAC

Clone NameB6Ng01-197G02
Chromosome2 (Build37)
Map Location 157,668,057 - 157,849,300
singlet/doubletdoublet
Overlap geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik
Upstream geneTgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat
Downstream gene2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197G02.bB6Ng01-197G02.g
ACCGA019259GA019260
length6741,091
definitionB6Ng01-197G02.b B6Ng01-197G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,848,626 - 157,849,300)(157,668,057 - 157,669,133)
sequence
gaattcaaagccagcctggtctacagagttccatgacagccagagctaca
cagtgaaaccctgccttgaagaaaaacaaacaaacaaacaaaaaacaaaa
aagacaagcttcagcccaatttttttgcatacagtttttcacaactttcc
tgaaagtggaatttatgtgcacaagtccaaagagtgtggtaaatgctttc
ttcgttactatcaaaaactgcctgccgtgactggacttttacattgttat
gttttaaaaaaaagatttcttttttttatttctgtgtatggggggggggg
gcaatatacacacatgtgtgcaagtgtctgcagaagccaaagaaagtgtt
ggatcccctggagctggagttaaaagtatttgtacgctacttgatgtggg
tgctgggaactgcacttggttctctgaactgctgaaccatctccatcccc
attgccaacttttttaattaaaatgtttttatgccaaccttccttctact
ggctcaactagtagagtttaataataatgtttaataataatgttccaatg
agatgttttcctcctatagtattacggtagttcttcaggtaattactaaa
agattcagaatctaattgtttataatactttcatttcacttttgtaagtc
agggatctataaatctccccctgg
gaattccattagcaattacaaagaccttcctgacaagaggatttcatcat
taaagataacagagcaagggccttaaagaagaggaaggtggaggggagag
ggcaaggacccagcactaggccaggacatccccgttgtacatcgttcaca
gccctccagctcagggtcattttcttttctaaaggttcagcgacgctgag
cctcgatgacaccaccaccaggtcagtcactaaaggaagactcagactcc
ctccacttggatcacaattctcgttatttcatgagctggggctgccttgc
ccatttgttttgctcggttagttacatgagttcttaatcagaaaactcac
ttcattacaagttgtcatggtggaagcgattcttgtttagctctttttca
ttttgaatgtgaaccattccctgcaggcttatatgttgaaagcctagtcc
ctagctggtggtgctgttttggaaatgtgaggatatgggcacccaactgg
agaagtcactggagctatgttctgtggggctaaacttggttcctgtctct
ctcctcctggctacttccctgctgccctgaggtgagcagctttcctcagc
atagtccagaagtgagggagcccaccaggtagaccaaactctgctatcat
gagccagaatgtctccttgtctccttgaattgtttgtgccagcctccaga
agtctaacgttatccttctgaatctcagattgtgaagaggaaggcagcga
ctgggtaaaagtgtggctgggcatttctagtgcctgggcatttctagtgc
ctgccgtacgcttggtacacgataggtgttcagtacatgctgggggcgcc
aataaatgagtttatgtagcacccgcatggtgtattagtgactgccacca
aaggtccggccaggattttcaaagcgtgactgaatcttgtattttcttaa
acatggcaggggtttcttacttccaaagaagttgctcattaataagttcc
atacagaattgttccttagtctctaagaacaaatgcctctacctcacctt
tcttggagttatgaacgactgagctagcttccatagtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157848626_157849300
seq2: B6Ng01-197G02.b_45_718 (reverse)

seq1  CCAGGGGGAGATTTATAGATCCCTGAACTTACAAAAGTGAAATGAAAGTA  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCAGGGGGAGATTTATAGATCCCTG-ACTTACAAAAGTGAAATGAAAGTA  49

seq1  TTATAAACAATTAGATTCTGAATCTTTTAGTAATTACCTGAAGAACTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACAATTAGATTCTGAATCTTTTAGTAATTACCTGAAGAACTACC  99

seq1  GTAATACTATAGGAGGAAAACATCTCATTGGAACATTATTATTAAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACTATAGGAGGAAAACATCTCATTGGAACATTATTATTAAACATT  149

seq1  ATTATTAAACTCTACTAGTTGAGCCAGTAGAAGGAAGGTTGGCATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAACTCTACTAGTTGAGCCAGTAGAAGGAAGGTTGGCATAAAAA  199

seq1  CATTTTAATTAAAAAAGTTGGCAATGGGGATGGAGATGGTTCAGCAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATTAAAAAAGTTGGCAATGGGGATGGAGATGGTTCAGCAGTTC  249

seq1  AGAGAACCAAGTGCAGTTCCCAGCACCCACATCAAGTAGCGTACAAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAGTGCAGTTCCCAGCACCCACATCAAGTAGCGTACAAATAC  299

seq1  TTTTAACTCCAGCTCCAGGGGATCCAACACTTTCTTTGGCTTCTGCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTCCAGCTCCAGGGGATCCAACACTTTCTTTGGCTTCTGCAGAC  349

seq1  ACTTGCACACATGTGTGTATATTGCCCCCCCCCCCCATACACAGAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCACACATGTGTGTATATTGCCCCCCCCCCCCATACACAGAAATAA  399

seq1  AAAAAAGAAATCTTTTTTTTAAAACATAACAATGTAAAAGTCCAGTCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAATCTTTTTTTTAAAACATAACAATGTAAAAGTCCAGTCACG  449

seq1  GCAGGCAGTTTTTGATAGTAACGAAGAAAGCATTTACCACACTCTTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGTTTTTGATAGTAACGAAGAAAGCATTTACCACACTCTTTGGA  499

seq1  CTTGTGCACATAAATTCCACTTTCAGGAAAGTTGTGAAAAACTGTATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCACATAAATTCCACTTTCAGGAAAGTTGTGAAAAACTGTATGCA  549

seq1  AAAAAATTGGGCTGAAGCTTGTCTTTTTTGTTTTTTGTTTGTTTGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGGGCTGAAGCTTGTCTTTTTTGTTTTTTGTTTGTTTGTTTGT  599

seq1  TTTTCTTCAAGGCAGGGTTTCACTGTGTAGCTCTGGCTGTCATGGAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCAAGGCAGGGTTTCACTGTGTAGCTCTGGCTGTCATGGAACTC  649

seq1  TGTAGACCAGGCTGGCTTTGAATTC  675
      |||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCTTTGAATTC  674

seq1: chr2_157668057_157669133
seq2: B6Ng01-197G02.g_66_1156

seq1  GAATTCCATTAGCAATTACAAAGACCTTCCTGACAAGAGGATTTCATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAGCAATTACAAAGACCTTCCTGACAAGAGGATTTCATCAT  50

seq1  TAAAGATAACAGAGCAAGGGCCTTAAAGAAGAGGAAGGTGGAGGGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAACAGAGCAAGGGCCTTAAAGAAGAGGAAGGTGGAGGGGAGAG  100

seq1  GGCAAGGACCCAGCACTAGGCCAGGACATCCCCGTTGTACATCGTTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGACCCAGCACTAGGCCAGGACATCCCCGTTGTACATCGTTCACA  150

seq1  GCCCTCCAGCTCAGGGTCATTTTCTTTTCTAAAGGTTCAGCGACGCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCAGCTCAGGGTCATTTTCTTTTCTAAAGGTTCAGCGACGCTGAG  200

seq1  CCTCGATGACACCACCACCAGGTCAGTCACTAAAGGAAGACTCAGACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGATGACACCACCACCAGGTCAGTCACTAAAGGAAGACTCAGACTCC  250

seq1  CTCCACTTGGATCACAATTCTCGTTATTTCATGAGCTGGGGCTGCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTGGATCACAATTCTCGTTATTTCATGAGCTGGGGCTGCCTTGC  300

seq1  CCATTTGTTTTGCTCGGTTAGTTACATGAGTTCTTAATCAGAAAACTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTTTTGCTCGGTTAGTTACATGAGTTCTTAATCAGAAAACTCAC  350

seq1  TTCATTACAAGTTGTCATGGTGGAAGCGATTCTTGTTTAGCTCTTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACAAGTTGTCATGGTGGAAGCGATTCTTGTTTAGCTCTTTTTCA  400

seq1  TTTTGAATGTGAACCATTCCCTGCAGGCTTATATGTTGAAAGCCTAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATGTGAACCATTCCCTGCAGGCTTATATGTTGAAAGCCTAGTCC  450

seq1  CTAGCTGGTGGTGCTGTTTTGGAAATGTGAGGATATGGGCACCCAACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGGTGGTGCTGTTTTGGAAATGTGAGGATATGGGCACCCAACTGG  500

seq1  AGAAGTCACTGGAGCTATGTTCTGTGGGGCTAAACTTGGTTCCTGTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCACTGGAGCTATGTTCTGTGGGGCTAAACTTGGTTCCTGTCTCT  550

seq1  CTCCTCCTGGCTACTTCCCTGCTGCCCTGAGGTGAGCAGCTTTCCTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTGGCTACTTCCCTGCTGCCCTGAGGTGAGCAGCTTTCCTCAGC  600

seq1  ATAGTCCAGAAGTGAGGGAGCCCACCAGGTAGACCAAACTCTGCTATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAGAAGTGAGGGAGCCCACCAGGTAGACCAAACTCTGCTATCAT  650

seq1  GAGCCAGAATGTCTCCTTGTCTCCTTGAATTGTTTGTGCCAGCCTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAATGTCTCCTTGTCTCCTTGAATTGTTTGTGCCAGCCTCCAGA  700

seq1  AGTCTAACGTTATCCTTCTGAATCTCAGATTGTGAAGAGGAAGGCAGCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAACGTTATCCTTCTGAATCTCAGATTGTGAAGAGGAAGGCAGCGA  750

seq1  CTGGGTAAAAGTGTGGCTGGGCATTTCTAGTGCCTGGGCATTTCTAGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAAAAGTGTGGCTGGGCATTTCTAGTGCCTGGGCATTTCTAGTGC  800

seq1  CTGCCGTACGCTTGGTACACGATAGGTGTTCAGTACATGCTGGGGGCGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTACGCTTGGTACACGATAGGTGTTCAGTACATGCTGGGGGCGCC  850

seq1  AATAAATGAGTTTATGTAGCACCCGCATGGTGTA-TAGTGACTGCCACC-  898
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  AATAAATGAGTTTATGTAGCACCCGCATGGTGTATTAGTGACTGCCACCA  900

seq1  AAGGTCCGGCCAGGA-TTTCAAAGCGTGACTGAATC-TGTA-TTTCTTAA  945
      ||||||||||||||| |||||||||||||||||||| |||| ||||||||
seq2  AAGGTCCGGCCAGGATTTTCAAAGCGTGACTGAATCTTGTATTTTCTTAA  950

seq1  ACAT-GCAGGGGTTTC-TACT--CCAAGAAGTTGCTCAGTAATA--GTCC  989
      |||| ||||||||||| ||||  | ||||||||||||| |||||   |||
seq2  ACATGGCAGGGGTTTCTTACTTCCAAAGAAGTTGCTCATTAATAAGTTCC  1000

seq1  ATACAGATTTGTTCCTTAGTCTCTAAGAACAAATG-CTCTA-CTCACCTT  1037
      ||||||| ||||||||||||||||||||||||||| ||||| ||||||||
seq2  ATACAGAATTGTTCCTTAGTCTCTAAGAACAAATGCCTCTACCTCACCTT  1050

seq1  TCT--GAGTTATGGAAGGACTGAGCTAGCTTCCATATTAACA  1077
      |||  ||||||| ||| ||||||||||||||||||| |||||
seq2  TCTTGGAGTTAT-GAACGACTGAGCTAGCTTCCATAGTAACA  1091