BAC Information

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BAC

Clone NameB6Ng01-197M17
Chromosome2 (Build37)
Map Location 81,959,928 - 82,114,492
singlet/doubletdoublet
Overlap geneZfp804a
Upstream geneLOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197M17.bB6Ng01-197M17.g
ACCGA019568GA019569
length1,1401,179
definitionB6Ng01-197M17.b B6Ng01-197M17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,959,928 - 81,961,075)(82,113,320 - 82,114,492)
sequence
gaattcattatagtctttcttgaaatcccaggggagtttattcacagatg
tagatttactgccagccttctgtaactgtctgtttggccttctctgtaag
cacaaagatgagaaattatccagaagaagtaaattcaagaagtgcattaa
aaataataagcatcatttcctgtcagcaggctagtactttatagtttctg
acacttgatgctggtgtggtgacagcccctgtgatttatgtgcaggatcc
tatgtcctttcaatggctcaaataaagcctgcatttcacagcttcaaaaa
aggtaaaggagactggaatcaaaatttgtttattttattgatttccccta
agtgtatttaattattcattgaggggtccatttaacactctcctctattt
ttaaccaattaaatttacattaaagatttatcaataacatttcaataatc
aatgatatttcatggcatttgacaactaaaaaatttttttctattgtaga
aaaatacatgccctgtattacatcagacaaatgatatatttcacatcata
atatgtttcacatcataataaagaaatgactttattgttggttcttatta
aatatattccttctatgactatcaaaggaaaatattatagaaatttatta
ttatgggaatataaactataagacagcatatggagagtttatgccttaat
tattaccataaaatgtaacagaggaagcacaatgacatcactatgacata
taatatggttattttctataatctggcaaacatgctttaaaatgtgtaaa
gattttaagtcccttcattattagagaaaaatctaaacttgcattgccaa
taataaacattcccaagactgtaacagtttctccaatgtcccttgacgag
gacagtgcaggagactgagagctcaattcattgctcataaatccaggctt
attgttaggagtgctatatttctattctttctcttttgtattttatatct
tacaccattgtttcatcttactgctattgttccatttacgtgtgttttct
ctgaagcccaatttcagaagaaaacacgttttcaggattcttacaatact
gcttggtctttcactattttctagaagaaaaaaaaatgta

gaattcattgcaaatctgggtctcagacctttctggagaagtacagaaga
aaacgtgcacttgacttgatggctgaaaagttatttcagcagcttcagtt
aagacttaagccaaaccacaaaatcactaagtcatagtctgttttcactg
caaaaaatatgctaaggtaatgttccaaaccttgtgggagtaatcaacaa
atgtctgatctgacttaaggccaactacatgcaacataacctatacccaa
tctgcttggatgaccacggaccagagactatatagaacagacataagata
aaacaaatcaccacttgtccctacccccaaaaagtatcaataaaatgact
cccaatgatatcctgctatactcatagatcagggtcttattcagacatcc
tcagatggaacagatggagagactcacacagacataactcagagaaaaga
gaatctttggaacccagagctctaaattggatgtttccattaaacccgtc
ccatcagagcacaagaaatctttaaagaggaggtggaaaaatccagaggg
gttggacgacatcatgagaaaaggacctctcaatcaattgaacaagctca
tacgaattcacagatactaaagcttcagagtcaactcatatctgcctgag
gtcctctgtctatatattagcactttcaccactagtatttctgtgggagt
cctgagtatgtgattgaaagagtctctgactcatttgcctgatcttgggt
ttcttctctttctattgggttggttgatccagccttgatataatgctttt
agttttatcttatattttatgttgttttgttgttatctactagaagcctg
ctcttttctaatgagatagaaaaggacttgatctgggattgtaggagatg
tgggggacaaactgagaaacataaagaaagggaaaacaataatcaggata
tatatatgagaaaacatgtactttttcaataaagagaaaagaaaaatgaa
aaaaaactgtttttagcagttcttttgagaaacgttattgttatcctcag
ctgcagtttggaaaaaccattgttgtttttaacggacagataattcattg
ctcatacctcaattgtggaagtcagggagttaggaattctagaactgtca
aatgctccaatggtctttcaatttgtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81959928_81961075
seq2: B6Ng01-197M17.b_45_1184

seq1  GAATTCATTATAGTCTTTCTTGAAATCCCAGGGGAGTTTATTCACAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATAGTCTTTCTTGAAATCCCAGGGGAGTTTATTCACAGATG  50

seq1  TAGATTTACTGCCAGCCTTCTGTAACTGTCTGTTTGGCCTTCTCTGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTACTGCCAGCCTTCTGTAACTGTCTGTTTGGCCTTCTCTGTAAG  100

seq1  CACAAAGATGAGAAATTATCCAGAAGAAGTAAATTCAAGAAGTGCATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGATGAGAAATTATCCAGAAGAAGTAAATTCAAGAAGTGCATTAA  150

seq1  AAATAATAAGCATCATTTCCTGTCAGCAGGCTAGTACTTTATAGTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAAGCATCATTTCCTGTCAGCAGGCTAGTACTTTATAGTTTCTG  200

seq1  ACACTTGATGCTGGTGTGGTGACAGCCCCTGTGATTTATGTGCAGGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGATGCTGGTGTGGTGACAGCCCCTGTGATTTATGTGCAGGATCC  250

seq1  TATGTCCTTTCAATGGCTCAAATAAAGCCTGCATTTCACAGCTTCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTTTCAATGGCTCAAATAAAGCCTGCATTTCACAGCTTCAAAAA  300

seq1  AGGTAAAGGAGACTGGAATCAAAATTTGTTTATTTTATTGATTTCCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGGAGACTGGAATCAAAATTTGTTTATTTTATTGATTTCCCCTA  350

seq1  AGTGTATTTAATTATTCATTGAGGGGTCCATTTAACACTCTCCTCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTAATTATTCATTGAGGGGTCCATTTAACACTCTCCTCTATTT  400

seq1  TTAACCAATTAAATTTACATTAAAGATTTATCAATAACATTTCAATAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAATTAAATTTACATTAAAGATTTATCAATAACATTTCAATAATC  450

seq1  AATGATATTTCATGGCATTTGACAACTAAAAAATTTTTTTCTATTGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATTTCATGGCATTTGACAACTAAAAAATTTTTTTCTATTGTAGA  500

seq1  AAAATACATGCCCTGTATTACATCAGACAAATGATATATTTCACATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATGCCCTGTATTACATCAGACAAATGATATATTTCACATCATA  550

seq1  ATATGTTTCACATCATAATAAAGAAATGACTTTATTGTTGGTTCTTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTCACATCATAATAAAGAAATGACTTTATTGTTGGTTCTTATTA  600

seq1  AATATATTCCTTCTATGACTATCAAAGGAAAATATTATAGAAATTTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTCCTTCTATGACTATCAAAGGAAAATATTATAGAAATTTATTA  650

seq1  TTATGGGAATATAAACTATAAGACAGCATATGGAGAGTTTATGCCTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGAATATAAACTATAAGACAGCATATGGAGAGTTTATGCCTTAAT  700

seq1  TATTACCATAAAATGTAACAGAGGAAGCACAATGACATCACTATGACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCATAAAATGTAACAGAGGAAGCACAATGACATCACTATGACATA  750

seq1  TAATATGGTTATTTTCTATAATCTGGCAAACATGCTTTAAAATGTGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGGTTATTTTCTATAATCTGGCAAACATGCTTTAAAATGTGTAAA  800

seq1  GATTTTAAGTCCCTTCATTATTAGAGAAAAATCTAAACTTGCATTGCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAGTCCCTTCATTATTAGAGAAAAATCTAAACTTGCATTGCCAA  850

seq1  TAATAAACATTCCCAAGACTGTAACAGTTTCTCCAATGTCCCTTGACGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAACATTCCCAAGACTGTAACAGTTTCTCCAATGTCCCTTGACGAG  900

seq1  GACAGTGCAGGAGACTGAGAGCTCAAATTCATTGCTCATAAATCCAGGCT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACAGTGCAGGAGACTGAGAGCTC-AATTCATTGCTCATAAATCCAGGCT  949

seq1  TATTGTTAGGAGTGCTATATTTTCTATTCTTTTCTTCTTTTGTATTTTAT  1000
      ||||||||||||||||||| ||||||||||||   |||||||||||||||
seq2  TATTGTTAGGAGTGCTATA-TTTCTATTCTTT--CTCTTTTGTATTTTAT  996

seq1  ATTCTTACACCATTGTTTCATCTACTTGCTATTGTTTCATTTACGTGGTG  1050
      | |||||||||||||||||||||   |||||||||| ||||||||| |||
seq2  A-TCTTACACCATTGTTTCATCTTACTGCTATTGTTCCATTTACGT-GTG  1044

seq1  TTTTCTCTGAAGCCCAATTTCAG-AGAAAACACGTTTTCAGGATACCTTA  1099
      ||||||||||||||||||||||| ||||||||||||||||||||  ||||
seq2  TTTTCTCTGAAGCCCAATTTCAGAAGAAAACACGTTTTCAGGAT-TCTTA  1093

seq1  CAATTACTGCTTGGTTCTTCACTATTTTCTTAGAAGAAAAAAAAATGTA  1148
      ||| |||||||||||  |||||||||||| |||||||||||||||||||
seq2  CAA-TACTGCTTGGTCTTTCACTATTTTC-TAGAAGAAAAAAAAATGTA  1140


seq1: chr2_82113320_82114492
seq2: B6Ng01-197M17.g_69_1247 (reverse)

seq1  GTTAAAAATTGAA--GCATTTGGAGCATTTGACAGTTCTAGAATTTTCCT  48
      |||| ||||||||   |  ||||||||||||||||||||||||  |||||
seq2  GTTACAAATTGAAAGACCATTGGAGCATTTGACAGTTCTAGAA--TTCCT  48

seq1  AACT-CCTGACTTCCACAAATGA-GTATGAGCATTGATTTATCTGTCCCG  96
      |||| |||||||||||||| ||| ||||||||| ||| |||||||| |||
seq2  AACTCCCTGACTTCCACAATTGAGGTATGAGCAATGAATTATCTGT-CCG  97

seq1  TTAAAAACAAC-ATGGTTTT--CCAACTGCACCTTGAGATA--CATAACG  141
      ||||||||||| ||||||||  | ||||||| ||   ||||   ||||||
seq2  TTAAAAACAACAATGGTTTTTCCAAACTGCAGCTGAGGATAACAATAACG  147

seq1  TTTCCTCAAAG-ACTGCT-AAAACAGTTTTTTTTTCATTTTTCTTTTCTT  189
      ||||   |||| |||||| ||||||| ||||||||||||||||||||| |
seq2  TTTCTCAAAAGAACTGCTAAAAACAG-TTTTTTTTCATTTTTCTTTTC-T  195

seq1  CTTTATTGAAAAAGTACATTGTTTTCTCATATATTATATCCTGATTATTG  239
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  CTTTATTGAAAAAGTACA-TGTTTTCTCATATA-TATATCCTGATTATTG  243

seq1  TTTTCCCTTTCTTTATGTTTCTCAGTTTGT-CCCCACATCTCCTACAAT-  287
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TTTTCCCTTTCTTTATGTTTCTCAGTTTGTCCCCCACATCTCCTACAATC  293

seq1  CCAGATCAAGTCCTTTTCTATCTCATTAGAAAAGAGCAGGCTTCTAGTAG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCAAGTCCTTTTCTATCTCATTAGAAAAGAGCAGGCTTCTAGTAG  343

seq1  ATAACAACAAAACAACATAAAATATAAGATAAAACTAAAAGCATTATATC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACAAAACAACATAAAATATAAGATAAAACTAAAAGCATTATATC  393

seq1  AAGGCTGGATCAACCAACCCAATAGAAAGAGAAGAAACCCAAGATCAGGC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGATCAACCAACCCAATAGAAAGAGAAGAAACCCAAGATCAGGC  443

seq1  AAATGAGTCAGAGACTCTTTCAATCACATACTCAGGACTCCCACAGAAAT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTCAGAGACTCTTTCAATCACATACTCAGGACTCCCACAGAAAT  493

seq1  ACTAGTGGTGAAAGTGCTAATATATAGACAGAGGACCTCAGGCAGATATG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGGTGAAAGTGCTAATATATAGACAGAGGACCTCAGGCAGATATG  543

seq1  AGTTGACTCTGAAGCTTTAGTATCTGTGAATTCGTATGAGCTTGTTCAAT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACTCTGAAGCTTTAGTATCTGTGAATTCGTATGAGCTTGTTCAAT  593

seq1  TGATTGAGAGGTCCTTTTCTCATGATGTCGTCCAACCCCTCTGGATTTTT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGAGGTCCTTTTCTCATGATGTCGTCCAACCCCTCTGGATTTTT  643

seq1  CCACCTCCTCTTTAAAGATTTCTTGTGCTCTGATGGGACGGGTTTAATGG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCTCTTTAAAGATTTCTTGTGCTCTGATGGGACGGGTTTAATGG  693

seq1  AAACATCCAATTTAGAGCTCTGGGTTCCAAAGATTCTCTTTTCTCTGAGT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCAATTTAGAGCTCTGGGTTCCAAAGATTCTCTTTTCTCTGAGT  743

seq1  TATGTCTGTGTGAGTCTCTCCATCTGTTCCATCTGAGGATGTCTGAATAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGTGTGAGTCTCTCCATCTGTTCCATCTGAGGATGTCTGAATAA  793

seq1  GACCCTGATCTATGAGTATAGCAGGATATCATTGGGAGTCATTTTATTGA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGATCTATGAGTATAGCAGGATATCATTGGGAGTCATTTTATTGA  843

seq1  TACTTTTTGGGGGTAGGGACAAGTGGTGATTTGTTTTATCTTATGTCTGT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTGGGGGTAGGGACAAGTGGTGATTTGTTTTATCTTATGTCTGT  893

seq1  TCTATATAGTCTCTGGTCCGTGGTCATCCAAGCAGATTGGGTATAGGTTA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGTCTCTGGTCCGTGGTCATCCAAGCAGATTGGGTATAGGTTA  943

seq1  TGTTGCATGTAGTTGGCCTTAAGTCAGATCAGACATTTGTTGATTACTCC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCATGTAGTTGGCCTTAAGTCAGATCAGACATTTGTTGATTACTCC  993

seq1  CACAAGGTTTGGAACATTACCTTAGCATATTTTTTGCAGTGAAAACAGAC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGTTTGGAACATTACCTTAGCATATTTTTTGCAGTGAAAACAGAC  1043

seq1  TATGACTTAGTGATTTTGTGGTTTGGCTTAAGTCTTAACTGAAGCTGCTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTAGTGATTTTGTGGTTTGGCTTAAGTCTTAACTGAAGCTGCTG  1093

seq1  AAATAACTTTTCAGCCATCAAGTCAAGTGCACGTTTTCTTCTGTACTTCT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTTTTCAGCCATCAAGTCAAGTGCACGTTTTCTTCTGTACTTCT  1143

seq1  CCAGAAAGGTCTGAGACCCAGATTTGCAATGAATTC  1173
      ||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGGTCTGAGACCCAGATTTGCAATGAATTC  1179


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