BAC Information

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BAC

Clone NameB6Ng01-198F18
Chromosome2 (Build37)
Map Location 63,351,540 - 63,474,929
singlet/doubletdoublet
Overlap geneEG667257
Upstream geneFap, Ifih1, Gca, Kcnh7
Downstream geneFign, LOC620544
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198F18.bB6Ng01-198F18.g
ACCGA019976GA019977
length1,130970
definitionB6Ng01-198F18.b B6Ng01-198F18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,351,540 - 63,352,655)(63,473,985 - 63,474,929)
sequence
gaattcacctcatctcaatacctctttcgatggcaactggctaaaaccca
agttagtaaaatacactaaagtccaaccaagtgagcataaaaattgacta
gtggagaaccattttaaaatatttatgtggttattgtttcagtatctcag
cttctttttcaaagttagcttaaaatgttctatgtttacttatatatata
tagtctggcatctccaaaaatttaataattaaaaacaaagcacaaaaaca
gatcctcaacacaagggggcactgtttaccaatctcttaggaatagactt
gggttgaaacattttctatttgagttctcaaagactaatttttaattcat
ccctcttaattttatatctgatttttcattgcaaatctggtaattaatag
ggaaatggaatttttaattaaaatgaaaatgcaaatttggagcttaaaat
ggattttgtgtgtgagtgtgtaattagtaatcaaaaatttaatctatctg
catctatactctatgccattgtatacatatactaccctacccttctccaa
tatgggctacattcacaatgtcctttcttcttgtcatctcatgagtgtac
tccttgttcttatttgcatagaatttaattcttgcttgttaagttcatca
aacatataactatacatatcatttccatgagagatcattttctagcaaac
gagatggctcatctaataaaggcacttttgtcaaaccttacttactacct
ttgttcaatatcaggaacgtacaaggtaacaagggggatatgactcctgc
aaattatcctctgatcacgacacccacactggaaaacagaaaatattact
taaaatacaatgctgtggtcttaaaggtgtaagtcatagctctacccaac
agtaaactattttttcattgaataaacatctgggagtagacatcttattt
catcatttaattctgtaatctaaattgtaatataataccaagaccactgt
taatacatatactatagttacacttacacaacatggtgaaaaccacaatt
caaggtccttataattttggtatccatgtttataaaattcaaatatctgt
aaatacctttttggtatttaatggtgagtt

gaattccataaaaatcttacacatctccttcccttagctgggctgccttg
tctgacctcagtaggagaggatgtgcatagttctgctgaaacatgatgtc
ctaggttggattggtacccatggaggtgctttccctcctctaagaaggaa
atcagtaatgggtagagggtcatgtgtgggtaggactgggacaagagcag
gagggtgtgactgattaattaattaattaattaattaattccttgagcct
tttttttctttattttaaaaaatttagtaacattttcctggatactttct
tccatgagtgatacttaatggaatagaaaaataacgtgtgtgtgtgtgta
aggggaatgaggaaactcatgcaagcatgtatgctcaatatgttaaggcc
agtggataaccactagtgtcatttttaggaccaggacattgctgtttttg
agacagaattttttaactggcctggaaatcacagatcagagtaagttgac
tgaccaaggggccctcaggaccttcccatgtgttcttcacttgtgcttgg
attttaagcataaccctccaatctttctaatgtagattctgagaatcatt
ctcgggtccttaagcttgtatatcaaacacttaccaattgagcatcaccc
ccattccccaagaaaatgtagttcttaatgaagtaggtattttaggatct
gaacttttacatatcaaattagtagctcctggagggagagacactgaact
cctgtccacagaagcccagtgttatttttaaggccctgaaagcatacaag
aaacacacaaaagaaagtataaaaaaagaattttcaacaattgtctagtt
tgtggaaattcagacactctgggctattttcccaaattttctatctgttt
aaaatattattgatggtctttagcattttaattttaggaatttttgtttg
cactctcgcaacaatggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_63351540_63352655
seq2: B6Ng01-198F18.b_49_1178

seq1  GAATTCACCTCATCTCAATACCTCTTTCGATGGCAACTGGCTAAAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCATCTCAATACCTCTTTCGATGGCAACTGGCTAAAACCCA  50

seq1  AGTTAGTAAAATACACTAAAGTCCAACCAAGTGAGCATAAAAATTGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTAAAATACACTAAAGTCCAACCAAGTGAGCATAAAAATTGACTA  100

seq1  GTGGAGAACCATTTTAAAATATTTATGTGGTTATTGTTTCAGTATCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAACCATTTTAAAATATTTATGTGGTTATTGTTTCAGTATCTCAG  150

seq1  CTTCTTTTTCAAAGTTAGCTTAAAATGTTCTATGTTTACTTATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTCAAAGTTAGCTTAAAATGTTCTATGTTTACTTATATATATA  200

seq1  TAGTCTGGCATCTCCAAAAATTTAATAATTAAAAACAAAGCACAAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGGCATCTCCAAAAATTTAATAATTAAAAACAAAGCACAAAAACA  250

seq1  GATCCTCAACACAAGGGGGCACTGTTTACCAATCTCTTAGGAATAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCAACACAAGGGGGCACTGTTTACCAATCTCTTAGGAATAGACTT  300

seq1  GGGTTGAAACATTTTCTATTTGAGTTCTCAAAGACTAATTTTTAATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAAACATTTTCTATTTGAGTTCTCAAAGACTAATTTTTAATTCAT  350

seq1  CCCTCTTAATTTTATATCTGATTTTTCATTGCAAATCTGGTAATTAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTAATTTTATATCTGATTTTTCATTGCAAATCTGGTAATTAATAG  400

seq1  GGAAATGGAATTTTTAATTAAAATGAAAATGCAAATTTGGAGCTTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGAATTTTTAATTAAAATGAAAATGCAAATTTGGAGCTTAAAAT  450

seq1  GGATTTTGTGTGTGAGTGTGTAATTAGTAATCAAAAATTTAATCTATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGTGTGTGAGTGTGTAATTAGTAATCAAAAATTTAATCTATCTG  500

seq1  CATCTATACTCTATGCCATTGTATACATATACTACCCTACCCTTCTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATACTCTATGCCATTGTATACATATACTACCCTACCCTTCTCCAA  550

seq1  TATGGGCTACATTCACAATGTCCTTTCTTCTTGTCATCTCATGAGTGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCTACATTCACAATGTCCTTTCTTCTTGTCATCTCATGAGTGTAC  600

seq1  TCCTTGTTCTTATTTGCATAGAATTTAATTCTTGCTTGTTAAGTTCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTCTTATTTGCATAGAATTTAATTCTTGCTTGTTAAGTTCATCA  650

seq1  AACATATAACTATACATATCATTTCCATGAGAGATCATTTTCTAGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAACTATACATATCATTTCCATGAGAGATCATTTTCTAGCAAAC  700

seq1  GAGATGGCTCATCTAATAAAGGCACTTTTGTCAAACCTTACTTACTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCATCTAATAAAGGCACTTTTGTCAAACCTTACTTACTACCT  750

seq1  TTGTTCAATATCAGGAACGTACAAGGTAACAAGGGGGATATGACTCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAATATCAGGAACGTACAAGGTAACAAGGGGGATATGACTCCTGC  800

seq1  AAATTATCCTCTGATCACGACACCCACACTGGAAAACAGAAAATATTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCTCTGATCACGACACCCACACTGGAAAACAGAAAATATTACT  850

seq1  TAAAATACAATGCTGTGGTCTTAAAGGTGTAAGTCATAGCTCTACCCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACAATGCTGTGGTCTTAAAGGTGTAAGTCATAGCTCTACCCAAC  900

seq1  AAGTAAACTA-TTTTTCATTGAATAAACATCT-GGAGTAGACATCTTATT  948
       ||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  -AGTAAACTATTTTTTCATTGAATAAACATCTGGGAGTAGACATCTTATT  949

seq1  TCATTCATTTAATTCTGTAATCT-AATTGT-ATATAATAACCAAGA-CAC  995
      ||| ||||||||||||||||||| |||||| ||||||| ||||||| |||
seq2  TCA-TCATTTAATTCTGTAATCTAAATTGTAATATAAT-ACCAAGACCAC  997

seq1  TGTT-ATACATATACTATAG-TACACTTACAC-ACAT-GTGAAAA-CAC-  1039
      |||| ||||||||||||||| ||||||||||| |||| ||||||| ||| 
seq2  TGTTAATACATATACTATAGTTACACTTACACAACATGGTGAAAACCACA  1047

seq1  ATTCAAAGTC--TATA--TTTTGTAT-CAGGTTTATAAATTCTAAATATC  1084
      |||||| |||  ||||  ||| |||| || ||||||||| |  |||||||
seq2  ATTCAAGGTCCTTATAATTTTGGTATCCATGTTTATAAAATTCAAATATC  1097

seq1  TGTAAAATACTTTTTTGTATTTTAT-GTGAGTT  1116
      ||||||   |||||| |||||| || |||||||
seq2  TGTAAATACCTTTTTGGTATTTAATGGTGAGTT  1130


seq1: chr2_63473985_63474929
seq2: B6Ng01-198F18.g_67_1029 (reverse)

seq1  TGTTGC--GAGTGCAA--CAAAAGTCCTAAA--TTAAATGCT-AAGA-CA  42
      ||||||  ||||||||   |||| |||||||  | ||||||| |||| ||
seq2  TGTTGCGAGAGTGCAAACAAAAATTCCTAAAATTAAAATGCTAAAGACCA  50

seq1  TCAATATAATTTTAAACAGATTAGAAAA-TTGGGAAAATAG-CCAGAGTG  90
      ||||||  |||||||||||| ||||||| |||||||||||| ||||||||
seq2  TCAATAATATTTTAAACAGA-TAGAAAATTTGGGAAAATAGCCCAGAGTG  99

seq1  TCTGA--TTTCAC-AACTAGACAATTG-TGAAAATTCTTTTTTTATACTT  136
      |||||  || ||| ||||||||||||| ||||||||||||||||||||||
seq2  TCTGAATTTCCACAAACTAGACAATTGTTGAAAATTCTTTTTTTATACTT  149

seq1  TCTTTTGTGTGTTTCTTGTATGCTTTCAGGGCCTT-AAAATTACACTGGG  185
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  TCTTTTGTGTGTTTCTTGTATGCTTTCAGGGCCTTAAAAATAACACTGGG  199

seq1  CTTCTGTGGACAGGAGTTCAGTGTCTCTCCCTCCAGGAGCTACTTATTTG  235
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTCTGTGGACAGGAGTTCAGTGTCTCTCCCTCCAGGAGCTACTAATTTG  249

seq1  ATATGT-AAAGTTCAGATCCT-AAATACCTACTTCATTAAGAACTACA-T  282
      |||||| |||||||||||||| |||||||||||||||||||||||||| |
seq2  ATATGTAAAAGTTCAGATCCTAAAATACCTACTTCATTAAGAACTACATT  299

seq1  TTCTTGGGGAAT-GGGGTGATGCTCAATTGGTAAGTGTTTGATATACAAG  331
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGGAATGGGGGTGATGCTCAATTGGTAAGTGTTTGATATACAAG  349

seq1  CTTAAGGACCCGAGAATGATTCTCAGAATCTACATTAGAAAGATTGGAGG  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGACCCGAGAATGATTCTCAGAATCTACATTAGAAAGATTGGAGG  399

seq1  GTTATGCTTAAAATCCAAGCACAAGTGAAGAACACATGGGAAGGTCCTGA  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCTTAAAATCCAAGCACAAGTGAAGAACACATGGGAAGGTCCTGA  449

seq1  GGGCCCCTTGGTCAGTCAACTTACTCTGATCTGTGATTTCCAGGCCAGTT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCCTTGGTCAGTCAACTTACTCTGATCTGTGATTTCCAGGCCAGTT  499

seq1  AAAAAATTCTGTCTCAAAAACAGCAATGTCCTGGTCCTAAAAATGACACT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCTGTCTCAAAAACAGCAATGTCCTGGTCCTAAAAATGACACT  549

seq1  AGTGGTTATCCACTGGCCTTAACATATTGAGCATACATGCTTGCATGAGT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTATCCACTGGCCTTAACATATTGAGCATACATGCTTGCATGAGT  599

seq1  TTCCTCATTCCCCTTACACACACACACACGTTATTTTTCTATTCCATTAA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTCCCCTTACACACACACACACGTTATTTTTCTATTCCATTAA  649

seq1  GTATCACTCATGGAAGAAAGTATCCAGGAAAATGTTACTAAATTTTTTAA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACTCATGGAAGAAAGTATCCAGGAAAATGTTACTAAATTTTTTAA  699

seq1  AATAAAGAAAAAAAAGGCTCAAGGAATTAATTAATTAATTAATTAATTAA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAAAAAAAGGCTCAAGGAATTAATTAATTAATTAATTAATTAA  749

seq1  TCAGTCACACCCTCCTGCTCTTGTCCCAGTCCTACCCACACATGACCCTC  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACACCCTCCTGCTCTTGTCCCAGTCCTACCCACACATGACCCTC  799

seq1  TACCCATTACTGATTTCCTTCTTAGAGGAGGGAAAGCACCTCCATGGGTA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATTACTGATTTCCTTCTTAGAGGAGGGAAAGCACCTCCATGGGTA  849

seq1  CCAATCCAACCTAGGACATCATGTTTCAGCAGAACTATGCACATCCTCTC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCAACCTAGGACATCATGTTTCAGCAGAACTATGCACATCCTCTC  899

seq1  CTACTGAGGTCAGACAAGGCAGCCCAGCTAAGGGAAGGAGATGTGTAAGA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGGTCAGACAAGGCAGCCCAGCTAAGGGAAGGAGATGTGTAAGA  949

seq1  TTTTTATGGAATTC  945
      ||||||||||||||
seq2  TTTTTATGGAATTC  963


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