BAC Information

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BAC

Clone NameB6Ng01-199F12
Chromosome2 (Build37)
Map Location 140,495,370 - 140,496,507
singlet/doubletsinglet
Overlap geneFlrt3
Upstream geneLOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199F12.bB6Ng01-199F12.g
ACCGA020700GA020701
length1,1211,151
definitionB6Ng01-199F12.b B6Ng01-199F12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattttctgttgccctcaagttttgatgctataaatgatagattt
ttaaatattcatgatctaattctgaggtcatacaaaattggaggcaggca
actgggaaaggacttggatgatagaggcttatttgacaagtaattaaact
tgtctacaaataaagctacaaagtaagaaaacagacacagaagactgaaa
atcatagaaacacataacagcttagtacactggtagatgagtaaaaacca
aagctttagaaactgtatatcaggttcagaattatttacttaaaacctgg
aattcggtaatagtttataaagatttctattcaaaatacttttttctatt
atatattgtattagttattttatttatttacatttcaaatgctattcccc
ttcccagtttctttcccttctgcagccctcctatacccatcccctatccc
cctgccccccacttctatgagggtgctctcccacacacccacccactctt
gctttactgccctagcatttccctacactggggtaatcaagcctccatag
gaacaagggcttcccctcccactcatgccagataaggtaatcctctgcta
cttatgcagctggagccatctgtcccttcatgtgtaatttctggttggtg
gtttagtccctgggagctctggggagtctagttggttgatattattgttc
ttcctatggggttacaaaccccttcagctccttcagtccttcccctaact
cctccattgaggtctgatggttggctgtgaacatcctcatctatatcggt
tcaggttcttggcagagcctctcaggggacagctataaccaggttcctat
cagcaagtgatttgttagcattagcaatagtgtctggatagtgtctgcag
aatgggatagatccctaggtgggtcagtctctggatggcctttccttcat
ctctgccctactcttggtcccagcattttctttagacaggagcattctgg
tgttattatttttaagaagattgtatgggtcccattccctggaatagggt
ggtcatgccaattccactggatattggtctcatcgaccttttccttcccc
ctatgatgggtattttggcta

gaattcactgtgtttattcatttgctaatatagtttctcacccttgggag
ttttctagtaaaacaataaactggtatttcttgttctttagttgaacaca
tgtaatgacatttttaacccttttcctcattttaggctgataagtatata
tatatatgcatacacatatacgtgaagctaagtgataaccagcctttgca
cagtcataccattatgcttgttgatatttgtagtgataataatatgttat
ggcactttaaaagaattaccttctttgctcatttccaaagagatgggtgt
cagtcacctgtcactctgagtcaagcctaagtgatcgtagcctgggagct
gacaggttcatccttctgtttatactggttagggtattcttacacagtta
aggatgaataaaggaatagccacagctgaagcacttttcatggctttgac
catgttgtttcatcccaataacacagcaaatatgtgcattttgaagcata
gatttattgagaacaatcaaaataattattaaaaaccatttgattttgta
atttggaaaacaccaacattttccatctccttttcattctaaataagtaa
taaacccgctcccaatgttgagaaaagatgggcctgttgcactctttacc
tttatgcaaccattttgtttcagacataatttactgaaaaacattttttt
taattagatacacttaaataccttttggaagctttgtggtctaacgcatt
tgtatcaatacaatattttttcactgtgtgttgcaagtgaagggacactc
tgcctttgccatttgatgaaggcttccctcccctgttcccctcactgcat
acatcaaagcacggcttccagggttgagctttgttagttttttctgagtg
gactacccagttactatgctagtcacattctacaactcgcccaagcgaat
aggctttgacagtctcctggactgggaattaatggtttgggcccgggaag
aattctgagttgggatttactagttgaagaattccgagccgaaatgcctg
aaggagcttggggcgataaagcagtgcaagcttttcaatctagttgtagc
ttttaattcttctacagaagcattcagtctcaggcaagctttgcttggcg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140495370_140496507
seq2: B6Ng01-199F12.g_68_1218

seq1  GAATTCACTGTGTTTATTCATTTGCTAATATAGTTTCTCACCCTTGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTTTATTCATTTGCTAATATAGTTTCTCACCCTTGGGAG  50

seq1  TTTTCTAGTAAAACAATAAACTGGTATTTCTTGTTCTTTAGTTGAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGTAAAACAATAAACTGGTATTTCTTGTTCTTTAGTTGAACACA  100

seq1  TGTAATGACATTTTTAACCCTTTTCCTCATTTTAGGCTGATAAGTATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGACATTTTTAACCCTTTTCCTCATTTTAGGCTGATAAGTATATA  150

seq1  TATATATGCATACACATATACGTGAAGCTAAGTGATAACCAGCCTTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCATACACATATACGTGAAGCTAAGTGATAACCAGCCTTTGCA  200

seq1  CAGTCATACCATTATGCTTGTTGATATTTGTAGTGATAATAATATGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATACCATTATGCTTGTTGATATTTGTAGTGATAATAATATGTTAT  250

seq1  GGCACTTTAAAAGAATTACCTTCTTTGCTCATTTCCAAAGAGATGGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTTAAAAGAATTACCTTCTTTGCTCATTTCCAAAGAGATGGGTGT  300

seq1  CAGTCACCTGTCACTCTGAGTCAAGCCTAAGTGATCGTAGCCTGGGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCTGTCACTCTGAGTCAAGCCTAAGTGATCGTAGCCTGGGAGCT  350

seq1  GACAGGTTCATCCTTCTGTTTATACTGGTTAGGGTATTCTTACACAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTTCATCCTTCTGTTTATACTGGTTAGGGTATTCTTACACAGTTA  400

seq1  AGGATGAATAAAGGAATAGCCACAGCTGAAGCACTTTTCATGGCTTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAATAAAGGAATAGCCACAGCTGAAGCACTTTTCATGGCTTTGAC  450

seq1  CATGTTGTTTCATCCCAATAACACAGCAAATATGTGCATTTTGAAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTTTCATCCCAATAACACAGCAAATATGTGCATTTTGAAGCATA  500

seq1  GATTTATTGAGAACAATCAAAATAATTATTAAAAACCATTTGATTTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTGAGAACAATCAAAATAATTATTAAAAACCATTTGATTTTGTA  550

seq1  ATTTGGAAAACACCAACATTTTCCATCTCCTTTTCATTCTAAATAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAAACACCAACATTTTCCATCTCCTTTTCATTCTAAATAAGTAA  600

seq1  TAAACCCGCTCCCAATGTTGAGAAAAGATGGGCCTGTTGCACTCTTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCGCTCCCAATGTTGAGAAAAGATGGGCCTGTTGCACTCTTTACC  650

seq1  TTTATGCAACCATTTTGTTTCAGACATAATTTACTGAAAAACATTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAACCATTTTGTTTCAGACATAATTTACTGAAAAACATTTTTTT  700

seq1  TAATTAGATACACTTAAATACCTTTTGGAAGCTTTGTGGTCTAACGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGATACACTTAAATACCTTTTGGAAGCTTTGTGGTCTAACGCATT  750

seq1  TGTATCAATACAATA-TTTTTCACTGTGTGTTGCAAGTGAAGGGACACTC  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTATCAATACAATATTTTTTCACTGTGTGTTGCAAGTGAAGGGACACTC  800

seq1  TGCCTTTGCCATTTGATG-AGGCTTCCCTCCCCTGTTCCCCTCACTGCAT  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCCTTTGCCATTTGATGAAGGCTTCCCTCCCCTGTTCCCCTCACTGCAT  850

seq1  ACATC-AAGCACGGCTTCCAGGG-TGAGCTTTGTTAG-TTTTTCTGAGTG  895
      ||||| ||||||||||||||||| ||||||||||||| ||||||||||||
seq2  ACATCAAAGCACGGCTTCCAGGGTTGAGCTTTGTTAGTTTTTTCTGAGTG  900

seq1  GACTACCCAGTTACTATGCTAGTCACATTCTAC-ACTCGCCCAAGCG-AT  943
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  GACTACCCAGTTACTATGCTAGTCACATTCTACAACTCGCCCAAGCGAAT  950

seq1  AGGCTTTGACAGTCTCCTGGACTGGGAAT--ATGGTTT-GGCCCGG--AG  988
      |||||||||||||||||||||||||||||  ||||||| |||||||  ||
seq2  AGGCTTTGACAGTCTCCTGGACTGGGAATTAATGGTTTGGGCCCGGGAAG  1000

seq1  -ATTCTGAGTT-GGATTTACTAGTTG-AGATTCCCGAGCCCGGAATGCCT  1035
       |||||||||| |||||||||||||| ||| | ||||| ||| |||||||
seq2  AATTCTGAGTTGGGATTTACTAGTTGAAGAATTCCGAG-CCGAAATGCCT  1049

seq1  GAAGGAGCTGGGGCCGGATAAGCAGTGCAAGCTTTCAAATCTAGGTGTAG  1085
      ||||||||| ||| ||   ||||||||||||||||  ||||||| |||||
seq2  GAAGGAGCTTGGGGCGATAAAGCAGTGCAAGCTTTTCAATCTAGTTGTAG  1099

seq1  CTGTTAA-TCCTCTACAGAGGCATCCCAGTCTCCCAGCGCAGCTTTGC-T  1133
      || |||| || |||||||| ||||  ||||||  |||   |||||||| |
seq2  CTTTTAATTCTTCTACAGAAGCAT-TCAGTCT--CAGGCAAGCTTTGCTT  1146

seq1  GGCGG  1138
      |||||
seq2  GGCGG  1151


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