BAC Information

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BAC

Clone NameB6Ng01-199H16
Chromosome2 (Build37)
Map Location 108,420,074 - 108,421,104
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199H16.bB6Ng01-199H16.g
ACCGA020803GA020804
length1,0331,209
definitionB6Ng01-199H16.b B6Ng01-199H16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagataaattattaattattcatttcattggaatgtatgagtt
taaaaaagatattctggttatcttattattttaatttctaactataattt
ggtctgaattctagcttaggtgttctttgtatgttctatttttctcactc
taaattgttatctattgaaattacttagctcattatttgataactataag
ttttatagaatcttgatgccacttttggttgtaaagaatgtgagatgaag
gggctggtgagatggctcagtgggtaagagcacccgactgctcttccgaa
ggtctggagttcaaatcccagcaaccacatggtggctcacaaccatctgt
aacaagatctgacgccctcttctggagtgtcggaagacagctatagtgta
cttaaatataataaataaataaataaataaataaataaataaataaataa
atattaaaaaaaaagaatgtgagatgaaacacgacggatatggtaaaagg
aacatgattaggatgatcatataccatgtaagtcaatgaattatagaaac
caatatctgtttacagtcctatttttctctcaaaattacgtggaaccaat
tattctcaccacctgttatgctcaatagctttatttgcaaaatattttag
atctgtagttttacatcaggtctttgtagactaggctggctttgaaatca
ctatgtgtcaaaactgactttgaacatgaggttattttctacatcaacat
ctcaagaattgtagtagaaatggataaaattgtttttacctattagaggt
tatatgtaagcccctacagctgaaagcattgaacacttaagatttgcttt
gagctggatctaagcctcatttctgcagcctacctttttacagtagcaga
aaatacaatagaagatgccaagagggaggaaacaaataatagacctttct
agcttcaacacctatgtatccacagtaatgggccagcaggcaagatttac
ataaagacacaaagtggcactcaccatgttggt
gaattccttgatccatttagatttgaccttagtacaaggagatgggaatg
gatcaattcgcattcttctacatgataaccaccagttgggccagcaccat
ttgttgaaaatgttgtcttggggctcagagataaacaaagaattctcacc
tgaggaatactgaatggctgagaagcacctgaaaaaatgttcagcatctt
taatcatcagggaaatgcaaatcaaaacaaccctgagattccatctcaca
ccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctggca
aggatgtggagaaagaggaacactcctccattgttggtgggattgcaagc
ttttacaaccactctggaaatcagtctggcagttcctcagaaaattggac
atagtactaccagcggatcccgcaatacctctcctgggcatatatccaga
agatgttccaactggtaagaaggacatatgcttcactatgttcatagcag
ccttatttataatatcgagaagctggaaagaacccagatgtccctcaaca
gagaactggatacagaaaatgtggtacatttacacaatggagtactactc
agctattaaaaagaatgaatttatgaaattcctaggcaaatggatggacc
tggagggcatcatcctgaatgaaataacccaatcacaaaagaactcacat
gatatgtactcactgataagtggctattagccccagaaacttagaatacc
caagatacaatttgcaaaacatgaaactcaagaagaacaaagaccaaagt
gtagacacttttgccccatcttagaattgggaacaaaacacccatggaag
gagttacagagacaaagtttggatctgagacgaaagggtagaccacctag
agactgccatacccggtgatcaatccaatattcatcctccaaacgctgac
actattgcatacactagcagattttggctggaaaggaccctgatatagca
gttctctttttggagggcttattgcttgggggcctagctaaaccacagga
gttggattgcttcaaccatcagctattggatggattacaagggcccccaa
atggagggagccttgagagaaaagtacctaggagcctaaatggatcttgc
aattctatagtggaaacaaacttttatgtgaactctatcccagttaccct
cttccatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108420074_108421104
seq2: B6Ng01-199H16.b_33_1065

seq1  GAATTCTAAGATAAATTATTAATTATTCATTTCATTGGAATGTATGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATAAATTATTAATTATTCATTTCATTGGAATGTATGAGTT  50

seq1  TAAAAAAGATATTCTGGTTATCTTATTATTTTAATTTCTAACTATAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGATATTCTGGTTATCTTATTATTTTAATTTCTAACTATAATTT  100

seq1  GGTCTGAATTCTAGCTTAGGTGTTCTTTGTATGTTCTATTTTTCTCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAATTCTAGCTTAGGTGTTCTTTGTATGTTCTATTTTTCTCACTC  150

seq1  TAAATTGTTATCTATTGAAATTACTTAGCTCATTATTTGATAACTATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTTATCTATTGAAATTACTTAGCTCATTATTTGATAACTATAAG  200

seq1  TTTTATAGAATCTTGATGCCACTTTTGGTTGTAAAGAATGTGAGATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGAATCTTGATGCCACTTTTGGTTGTAAAGAATGTGAGATGAAG  250

seq1  GGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA  300

seq1  GGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT  350

seq1  AACAAGATCTGACGCCCTCTTCTGGAGTGTCGGAAGACAGCTATAGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATCTGACGCCCTCTTCTGGAGTGTCGGAAGACAGCTATAGTGTA  400

seq1  CTTAAATATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA  450

seq1  ATATTAAAAAAAAAGAATGTGAGATGAAACACGACGGATATGGTAAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAAAAAAGAATGTGAGATGAAACACGACGGATATGGTAAAAGG  500

seq1  AACATGATTAGGATGATCATATACCATGTAAGTCAATGAATTATAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATTAGGATGATCATATACCATGTAAGTCAATGAATTATAGAAAC  550

seq1  CAATATCTGTTTACAGTCCTATTTTTCTCTCAAAATTACGTGGAACCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTGTTTACAGTCCTATTTTTCTCTCAAAATTACGTGGAACCAAT  600

seq1  TATTCTCACCACCTGTTATGCTCAATAGCTTTATTTGCAAAATATTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCACCACCTGTTATGCTCAATAGCTTTATTTGCAAAATATTTTAG  650

seq1  ATCTGTAGTTTTACATCAGGTCTTTGTAGACTAGGCTGGCTTTGAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAGTTTTACATCAGGTCTTTGTAGACTAGGCTGGCTTTGAAATCA  700

seq1  CTATGTGTCAAAACTGACTTTGAACATGAGGTTATTTTCTACATCAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGTCAAAACTGACTTTGAACATGAGGTTATTTTCTACATCAACAT  750

seq1  CTCAAGAATTGTAGTAGAAATGGATAAAATTGTTTTTACCTATTAGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAATTGTAGTAGAAATGGATAAAATTGTTTTTACCTATTAGAGGT  800

seq1  TATATGTAAGCCCCTACAGCTGAAAGCATTGAACACTTAAGATTTGCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTAAGCCCCTACAGCTGAAAGCATTGAACACTTAAGATTTGCTTT  850

seq1  GAGCTGGATCTAAGCCTCATTTCTGCAGCCTACC-TTTTACAGTAGCAGA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGCTGGATCTAAGCCTCATTTCTGCAGCCTACCTTTTTACAGTAGCAGA  900

seq1  AAATACAATAGAAGATGCCAAGAGGGAGGAAACAAATAATAGACCTTTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATAGAAGATGCCAAGAGGGAGGAAACAAATAATAGACCTTTCT  950

seq1  AGCTTCAACACCTATGTAT-CACAGTAAT-GGCCAGCAGGCAAGATTTAC  997
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  AGCTTCAACACCTATGTATCCACAGTAATGGGCCAGCAGGCAAGATTTAC  1000

seq1  ATAAAGACACAAAAGTGGCACTCACCATGTTGGT  1031
      |||||||||| |||||||||||||||||||||||
seq2  ATAAAGACAC-AAAGTGGCACTCACCATGTTGGT  1033