BAC Information

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BAC

Clone NameB6Ng01-199K21
Chromosome2 (Build37)
Map Location 108,316,285 - 108,436,032
singlet/doubletdoublet
Overlap geneLOC100043078, LOC668790
Upstream genenone
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199K21.bB6Ng01-199K21.g
ACCGA020951GA020952
length1,1051,091
definitionB6Ng01-199K21.b B6Ng01-199K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,316,285 - 108,317,409)(108,434,933 - 108,436,032)
sequence
gaattcccttaactgctgtaccttttctccagcacctcaatagtaatttt
accaaatacaggagaatgtataatcaattgcacacaaacttttccagaca
gtacaagatgtggtcctaaagtctatttcccactctttttataagcatag
acaattctcagagacacacaacatagacacagctataaatcaaatctttg
aaatattcataaattgaatatttgaaaaatataaaatcaatataaaaatt
gactcaccatgatcaagtggaatctatcctcaagtaaattaattataatt
aaaagtctaacatagaaacccttgattttctcaggatatttaaaacaatt
ttgataaatttcaacatccattaactataaaacaccaaaagaatcatgaa
tcagatagagtaaatctataagaaatatctgcagctaatagtatggaaaa
taataactttatagaaatcttactaatggtaggaacaatagagaattatc
tttatttagcactatatctatggacttgggcatgatcagtcacatttaga
agcagccaactatcaagtggtatacatattaacaaattgcagtccattgt
tacagaggaactttggagattaatgacaatagactgactgtaaaaatatc
aacgtcatggaatataaagtaagtttgattcaaggccacatagcaacaaa
gcctttatatgacattttatgtcttctggcagttctgaaaatgaattatt
ttgaaaagatattatgtaggcaacatattttatgttaaactataaatatc
agtatgttaagcacaaatttaggtataaaaatttaggtataaaaataagc
aaagataagccgggtgtggtggcacacgcctttaatcccagcactaggga
ggcagaggcaggcagatttctgagttcgaggccagcctggtctacaaagt
gagttccaggacagccagggcatacagacaaaccctgtctggaaaaccat
aaaaaaaaaaaaaaaggcaagagcataatttagttatagaaaaatagcca
ctagggagtcattcatgatactttggggtagtttcaggaccgatgtagtt
acatt
gaattctaagttccttttgtctgggtgaaccatccctaaaatggcaggcc
acctaggaactattcctttttggatccctaaaacagacctatattatgct
agcaaacagcctgtcctgcattctcaataaacaactcactttctttaagg
aattaaaaaaaaaaaaaaaaaaaaaacttgattaccatactacttctgta
agtagggattgttctttaattaaatcagcagatttttttaaatttataaa
cataattggaaatattaaaaagtaatattagcaactaattattagtgatt
aaataatgaaactactgattaagtaattaattgttttccttccattaagc
agttgaaaaggaagcatgatgatctgcataaatttgaatatttgtaatga
tactgagaacctctaatcttcctgcctcctgggtctccagttaggattca
ctgtattacattgtctagaatcaccttgtttccagttcttgctctaggat
gcagttggaagaagacatactccagtgtggtgcccaagatccatgccccc
tggtgttcatccccttttccttttgatttggtagtcttttccttttgatt
gtggagatcatggcttagttttatcttctgtggctgtgataaaacactct
tagaagaacaactttaaaaaataaagtttatttattttattttggtttta
aattctaagatatagtccatcatttcagggaagtcaaggatggagctgaa
agcagctggatatctctctaatcagcagctgactaggaagacgcacacac
ccacagtcaaagagtggagaaacttacagactcttgaagaagaaacggag
gaagtttgcagatcactaagggaataagaactccataggaagaccaacag
attcaactaacctggaccctttgaggcttcttagagactgaccaccacca
aaaagcagaaatggctggacttagcctcccccgccacacatgtagcagat
tgcagcttaagctcatgtgctctgtaacaatgagtgaagactgtctaaag
tgcctctgatgtggaatgttccttctagtggggcctcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108316285_108317409
seq2: B6Ng01-199K21.b_47_1151

seq1  GAATTCCCTTAACTGCTGTACCTTTTCTCCAGCACCTCAATAGTAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAACTGCTGTACCTTTTCTCCAGCACCTCAATAGTAATTTT  50

seq1  ACCAAATACAGGAGAATGTATAATCAATTGCACACAAACTTTTCCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATACAGGAGAATGTATAATCAATTGCACACAAACTTTTCCAGACA  100

seq1  GTACAAGATGTGGTCCTAAAGTCTATTTCCCACTCTTTTTATAAGCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGATGTGGTCCTAAAGTCTATTTCCCACTCTTTTTATAAGCATAG  150

seq1  ACAATTCTCAGAGACACACAACATAGACACAGCTATAAATCAAATCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCAGAGACACACAACATAGACACAGCTATAAATCAAATCTTTG  200

seq1  AAATATTCATAAATTGAATATTTGAAAAATATAAAATCAATATAAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCATAAATTGAATATTTGAAAAATATAAAATCAATATAAAAATT  250

seq1  GACTCACCATGATCAAGTGGAATCTATCCTCAAGTAAATTAATTATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACCATGATCAAGTGGAATCTATCCTCAAGTAAATTAATTATAATT  300

seq1  AAAAGTCTAACATAGAAACCCTTGATTTTCTCAGGATATTTAAAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTAACATAGAAACCCTTGATTTTCTCAGGATATTTAAAACAATT  350

seq1  TTGATAAATTTCAACATCCATTAACTATAAAACACCAAAAGAATCATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAATTTCAACATCCATTAACTATAAAACACCAAAAGAATCATGAA  400

seq1  TCAGATAGAGTAAATCTATAAGAAATATCTGCAGCTAATAGTATGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGAGTAAATCTATAAGAAATATCTGCAGCTAATAGTATGGAAAA  450

seq1  TAATAACTTTATAGAAATCTTACTAATGGTAGGAACAATAGAGAATTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTTTATAGAAATCTTACTAATGGTAGGAACAATAGAGAATTATC  500

seq1  TTTATTTAGCACTATATCTATGGACTTGGGCATGATCAGTCACATTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGCACTATATCTATGGACTTGGGCATGATCAGTCACATTTAGA  550

seq1  AGCAGCCAACTATCAAGTGGTATACATATTAACAAATTGCAGTCCATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAACTATCAAGTGGTATACATATTAACAAATTGCAGTCCATTGT  600

seq1  TACAGAGGAACTTTGGAGATTAATGACAATAGACTGACTGTAAAAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGAACTTTGGAGATTAATGACAATAGACTGACTGTAAAAATATC  650

seq1  AACGTCATGGAATATAAAGTAAGTTTGATTCAAGGCCACATAGCAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCATGGAATATAAAGTAAGTTTGATTCAAGGCCACATAGCAACAAA  700

seq1  GCCTTTATATGACATTTTATGTCTTCTGGCAGTTCTGAAAATGAATTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTATATGACATTTTATGTCTTCTGGCAGTTCTGAAAATGAATTATT  750

seq1  TTGAAAAGATATTATGTAGGCAACATATTTTATGTTAAACTATAAATATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGATATTATGTAGGCAACATATTTTATGTTAAACTATAAATATC  800

seq1  AGTATGTTAAGCACAAATTTAGGTATAAAAATTTAGGTATAAAAATAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTAAGCACAAATTTAGGTATAAAAATTTAGGTATAAAAATAAGC  850

seq1  AAAGATAAGCCGGGTGTGGTGGCACACGCCTTTAATCCCAGCACTAGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAGCCGGGTGTGGTGGCACACGCCTTTAATCCCAGCACTAGGGA  900

seq1  GGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGT  950

seq1  GAGTTCCAGGACAGCCAGGGCAATACAGACAAACCCTGTCTGGAAAAACC  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||| | 
seq2  GAGTTCCAGGACAGCCAGGGC-ATACAGACAAACCCTGTCTGGAAAACC-  998

seq1  AAAAAAAAAAAAAAAAAAAAAAAAGCAAAGAGCAAAATTTAGGTATAGAA  1050
             | ||||||||||||||||  ||||||| ||||||| |||||||
seq2  -------ATAAAAAAAAAAAAAAAGGCAAGAGCATAATTTAGTTATAGAA  1041

seq1  AATAAGCCACTAAGGAGTTCATTTCAATGAATTACTTTTGGGGTAGTTTT  1100
      ||  |||||||| |||| |||||   ||||  ||| |||||||||| |||
seq2  AAATAGCCACTAGGGAG-TCATT--CATGA--TAC-TTTGGGGTAG-TTT  1084

seq1  CAGGAACAGAAGTGTAGTTTACATT  1125
      |||| || ||  ||||| |||||||
seq2  CAGG-ACCGA--TGTAG-TTACATT  1105

seq1: chr2_108434933_108436032
seq2: B6Ng01-199K21.g_67_1157 (reverse)

seq1  CACTGAGGCCCCACTAGAA-GAACATCCCACATTCAGGAGGCAACTTTTA  49
      ||||||||||||||||||| |||||| ||||| ||| ||||| |||||  
seq2  CACTGAGGCCCCACTAGAAGGAACATTCCACA-TCA-GAGGC-ACTTT--  45

seq1  GGACAGTTCCTCACTCAATTTGTACAGAAGCCACATGAAGCTAAGCTGCA  99
       ||||| || |||||| |||  ||||||   |||||||   |||||||||
seq2  AGACAG-TCTTCACTC-ATTGTTACAGA--GCACATGAGCTTAAGCTGCA  91

seq1  TATCTGCTACATGTGT-GCGGGGAGGCCTAGGTCCAGCCCATTTCTGCTT  148
       ||||||||||||||| ||||||  | ||| |||||| ||||||||||||
seq2  -ATCTGCTACATGTGTGGCGGGGGAGGCTAAGTCCAG-CCATTTCTGCTT  139

seq1  TTTGGTTGGTGGTTCAGTCTCTAAG-AGCCTC-AAGGGTCCAGGTTAGTT  196
      ||||| |||||| |||||||||||| |||||| |||||||||||||||||
seq2  TTTGG-TGGTGG-TCAGTCTCTAAGAAGCCTCAAAGGGTCCAGGTTAGTT  187

seq1  GAATCTGTTGGTCTTCCTATGGAGTTCTTATTCCCTTAGTGATCTGCAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTTGGTCTTCCTATGGAGTTCTTATTCCCTTAGTGATCTGCAAA  237

seq1  CTTTCCTCCGTTTCTTCTTCAAGAGTCTGTAAGTTTCTCCACTCTTTGAC  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTCCTCCGTTTCTTCTTCAAGAGTCTGTAAGTTTCTCCACTCTTTGAC  286

seq1  TGTGGGTGTGTGCGTCTTCCTAGTCAGCTGCTGATTAGAGAGATATCCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGTGTGCGTCTTCCTAGTCAGCTGCTGATTAGAGAGATATCCAG  336

seq1  CTGCTTTCAGCTCCATCCTTGACTTCCCTGAAATGATGGACTATATCTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCAGCTCCATCCTTGACTTCCCTGAAATGATGGACTATATCTTA  386

seq1  GAATTTAAAACCAAAATAAAATAAATAAACTTTATTTTTTAAAGTTGTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAAACCAAAATAAAATAAATAAACTTTATTTTTTAAAGTTGTTC  436

seq1  TTCTAAGAGTGTTTTATCACAGCCACAGAAGATAAAACTAAGCCATGATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGAGTGTTTTATCACAGCCACAGAAGATAAAACTAAGCCATGATC  486

seq1  TCCACAATCAAAAGGAAAAGACTACCAAATCAAAAGGAAAAGGGGATGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATCAAAAGGAAAAGACTACCAAATCAAAAGGAAAAGGGGATGAA  536

seq1  CACCAGGGGGCATGGATCTTGGGCACCACACTGGAGTATGTCTTCTTCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGGGGCATGGATCTTGGGCACCACACTGGAGTATGTCTTCTTCCA  586

seq1  ACTGCATCCTAGAGCAAGAACTGGAAACAAGGTGATTCTAGACAATGTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCCTAGAGCAAGAACTGGAAACAAGGTGATTCTAGACAATGTAA  636

seq1  TACAGTGAATCCTAACTGGAGACCCAGGAGGCAGGAAGATTAGAGGTTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAATCCTAACTGGAGACCCAGGAGGCAGGAAGATTAGAGGTTCT  686

seq1  CAGTATCATTACAAATATTCAAATTTATGCAGATCATCATGCTTCCTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCATTACAAATATTCAAATTTATGCAGATCATCATGCTTCCTTTT  736

seq1  CAACTGCTTAATGGAAGGAAAACAATTAATTACTTAATCAGTAGTTTCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTTAATGGAAGGAAAACAATTAATTACTTAATCAGTAGTTTCAT  786

seq1  TATTTAATCACTAATAATTAGTTGCTAATATTACTTTTTAATATTTCCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATCACTAATAATTAGTTGCTAATATTACTTTTTAATATTTCCAA  836

seq1  TTATGTTTATAAATTTAAAAAAATCTGCTGATTTAATTAAAGAACAATCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTATAAATTTAAAAAAATCTGCTGATTTAATTAAAGAACAATCC  886

seq1  CTACTTACAGAAGTAGTATGGTAATCAAG-TTTTTTTTTTTTTTTTTTTT  945
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTACTTACAGAAGTAGTATGGTAATCAAGTTTTTTTTTTTTTTTTTTTTT  936

seq1  TAATTCCTTAAAGAAAGTGAGTTGTTTATTGAGAATGCAGGACAGGCTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTTAAAGAAAGTGAGTTGTTTATTGAGAATGCAGGACAGGCTGT  986

seq1  TTGCTAGCATAATATAGGTCTGTTTTAGGGATCCAAAAAGGAATAGTTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGCATAATATAGGTCTGTTTTAGGGATCCAAAAAGGAATAGTTCC  1036

seq1  TAGGTGGCCTGCCATTTTAGGGATGGTTCACCCAGACAAAAGGAACTTAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGCCTGCCATTTTAGGGATGGTTCACCCAGACAAAAGGAACTTAG  1086

seq1  AATTC  1100
      |||||
seq2  AATTC  1091