BAC Information

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BAC

Clone NameB6Ng01-200C14
Chromosome2 (Build37)
Map Location 88,260,029 - 88,261,162
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180
Downstream geneOlfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239
LinkOpen Mouse BAC browser

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BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200C14.bB6Ng01-200C14.g
ACCGA021300GA021301
length1,1601,016
definitionB6Ng01-200C14.b B6Ng01-200C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgacagctctacctaggatctaacggtgaccacttcatcata
taatcaggcagattctatgatgagtgattagtttgtattagtggtgataa
caaaaggatgcaatgtagatacctatttgttaactcttagatctatcaat
attactcaagtgatcattgcctagggtcagctgtcgctgacctatataca
tttctatcacaattaatttctattcatactctcacaaagcaaactgctta
tcccatttttgtttctcatggaagagtccatggaccttttattttaatgg
tgaggttcttgaatgtgttggaattatgcctcatgttactcagagctgcc
taacaaaatgatgtgtagacactgggccgtgctctaggatggtacatttg
taaactttctctccctgtatctcagtgtcttcctcacctaacttggactt
ccatttagtttattcataagaataatgcaggtttcagtacaaagaatata
ctggatattccactttagcttttatgtatgtgtaataatcaaactagaac
aggaattaagaatatagttgtcattattgcattatataactacattgtat
ttaataaatttacagtacatttatatattaatagatacacctgaaaacca
gtttaagtaaatttgttagctagataaaacctaaaatccttcctcaggat
atattattttccttaattcacaattatttaaactttaaataaactaacaa
aactgtttacttaatttttattcattcatttattcatttcttgttcattt
atttctttttcccctttttattgaagtatatttctcataaaattattcct
gattaataattggatatataaaatattcattccgcttttctatagcacag
catgtctctactaatatcctggaaatatgtccttttttagatttcacgtt
gtttaatcatttattccattattctgctgctgaattattaaaaatcttcc
caatttttactttttataaatttcctgggaatttagaagtaattaactta
caagacacgcataggagggagtcccaatcgttatgtattctggaggactt
gtactgggctcttttattcatgtttgtctttcaatgaatttattttcaag
gctaagaaaa
gaattctttgtttagctctgtaccacaatttttaatagggttatttgata
ttctggagtttagcttcttgagttctttgcatatgttgagtattagttct
ctatcatatttaggattgataaagatcctttcccaatgtgtaggtggcct
ttttgccttattgacagtgtcttttgccttacagaagctttgcaatttta
taaaatcccatttgtagattcttgatcttacagcacaagccattgttttc
tattcaggaatttttcccctgggcccatatcttcaagggttttccccact
ttttcctgaatacatttcagagtctctggttttaagggaagttccttgat
ccatttagacatgagctttgtacaagaagattagaatggatcaatgtgct
ttcttctacctgataacttccacttaagccagcaccatttgtttaacatg
ttgtcttttttacactgaatggttttagcccctttaaaaagatcaagtga
ccacaggtgtttgggtccattgctgggtctttaattctattccattgatc
tacctgtctgtcactgtaccagtatcatgcagttgctatcacaattgctc
tgtagtacagcttgaggtcacagatggtgattcccccagaggttctttaa
ttgttgagattaacttttgatatcctaggttttttattattctagatgaa
tttgttaattgccctttctaactctgcgaagaattgagttggaattatga
tagggggttgcattgaatctgtagattgctatctgcaagatagacatttt
tactatattaaatccttccactctatgagcctgggagatcatttccatct
ttttgagattttctttccatttcattcttcagagacttgaagttcttatc
ataccagaatctttcactttccttaggttagaggtcacactaaaggtatt
ttatattattttgtgactatattatgaaagggtggttgttttccctaatt
tcctttctcagcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88260029_88261162
seq2: B6Ng01-200C14.b_44_1203 (reverse)

seq1  TTTTCTTA-CCATG-AAATAAA-TCAT--GAAGACAAA-AGGAAT-AAAG  43
      |||||||| || || ||||||| ||||   |||||||| | |||| ||||
seq2  TTTTCTTAGCCTTGAAAATAAATTCATTGAAAGACAAACATGAATAAAAG  50

seq1  AG-CCAGT--AAGT-CTCCAGGAAACATA---CATAGGACT-CCTCCTAT  85
      || |||||  |||| |||||| | |||||     | ||||| ||||||||
seq2  AGCCCAGTACAAGTCCTCCAGAATACATAACGATTGGGACTCCCTCCTAT  100

seq1  GTGTGT-TTTTAA-TTTATTACTT-TAAATT-CCAG--AAATTATAAAAA  129
      | |||| || ||| || ||||||| |||||| ||||  || |||||||||
seq2  GCGTGTCTTGTAAGTTAATTACTTCTAAATTCCCAGGAAATTTATAAAAA  150

seq1  GTAATAATT-GGAAGA-TTTTAATAATTCAGCAGCAGAAT-ATTGAATAA  176
      |||| |||| |||||| ||||||||||||||||||||||| || ||||||
seq2  GTAAAAATTGGGAAGATTTTTAATAATTCAGCAGCAGAATAATGGAATAA  200

seq1  ATGATTAAAC-ACCTGAAATCTAAAAAA-GACATATTTCCAGGATATTAA  224
      |||||||||| || |||||||||||||| ||||||||||||||||||| |
seq2  ATGATTAAACAACGTGAAATCTAAAAAAGGACATATTTCCAGGATATT-A  249

seq1  GTAGAGACATGCTGTGCTATAGAAAAG-GGAATGAATATTTTATATATCC  273
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTAGAGACATGCTGTGCTATAGAAAAGCGGAATGAATATTTTATATATCC  299

seq1  AATTATTAATCAGG-ATTATTTTATGAGAAATATACTTTCAATAAAAAGG  322
      |||||||||||||| || |||||||||||||||||| |||||||||||||
seq2  AATTATTAATCAGGAATAATTTTATGAGAAATATAC-TTCAATAAAAAGG  348

seq1  GGAAAAAGAAATAAATGAACAAGAAATGAATAAATGAATGAATAAAAATT  372
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAAATAAATGAACAAGAAATGAATAAATGAATGAATAAAAATT  398

seq1  AAGTAAACAGTTTTGTTAGTTTATTTAAAGTTTAAATAATTGTGAATTAA  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACAGTTTTGTTAGTTTATTTAAAGTTTAAATAATTGTGAATTAA  448

seq1  GGAAAATAATATATCCTGAGGAAGGATTTTAGGTTTTATCTAGCTAACAA  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAATATATCCTGAGGAAGGATTTTAGGTTTTATCTAGCTAACAA  498

seq1  ATTTACTTAAACTGGTTTTCAGGTGTATCTATTAATATATAAATGTACTG  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTAAACTGGTTTTCAGGTGTATCTATTAATATATAAATGTACTG  548

seq1  TAAATTTATTAAATACAATGTAGTTATATAATGCAATAATGACAACTATA  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATTAAATACAATGTAGTTATATAATGCAATAATGACAACTATA  598

seq1  TTCTTAATTCCTGTTCTAGTTTGATTATTACACATACATAAAAGCTAAAG  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTCCTGTTCTAGTTTGATTATTACACATACATAAAAGCTAAAG  648

seq1  TGGAATATCCAGTATATTCTTTGTACTGAAACCTGCATTATTCTTATGAA  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATCCAGTATATTCTTTGTACTGAAACCTGCATTATTCTTATGAA  698

seq1  TAAACTAAATGGAAGTCCAAGTTAGGTGAGGAAGACACTGAGATACAGGG  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAAATGGAAGTCCAAGTTAGGTGAGGAAGACACTGAGATACAGGG  748

seq1  AGAGAAAGTTTACAAATGTACCATCCTAGAGCACGGCCCAGTGTCTACAC  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGTTTACAAATGTACCATCCTAGAGCACGGCCCAGTGTCTACAC  798

seq1  ATCATTTTGTTAGGCAGCTCTGAGTAACATGAGGCATAATTCCAACACAT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTGTTAGGCAGCTCTGAGTAACATGAGGCATAATTCCAACACAT  848

seq1  TCAAGAACCTCACCATTAAAATAAAAGGTCCATGGACTCTTCCATGAGAA  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACCTCACCATTAAAATAAAAGGTCCATGGACTCTTCCATGAGAA  898

seq1  ACAAAAATGGGATAAGCAGTTTGCTTTGTGAGAGTATGAATAGAAATTAA  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATGGGATAAGCAGTTTGCTTTGTGAGAGTATGAATAGAAATTAA  948

seq1  TTGTGATAGAAATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGAT  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATAGAAATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGAT  998

seq1  CACTTGAGTAATATTGATAGATCTAAGAGTTAACAAATAGGTATCTACAT  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGTAATATTGATAGATCTAAGAGTTAACAAATAGGTATCTACAT  1048

seq1  TGCATCCTTTTGTTATCACCACTAATACAAACTAATCACTCATCATAGAA  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTTTTGTTATCACCACTAATACAAACTAATCACTCATCATAGAA  1098

seq1  TCTGCCTGATTATATGATGAAGTGGTCACCGTTAGATCCTAGGTAGAGCT  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGATTATATGATGAAGTGGTCACCGTTAGATCCTAGGTAGAGCT  1148

seq1  GTCATGGAATTC  1134
      ||||||||||||
seq2  GTCATGGAATTC  1160