BAC Information

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BAC

Clone NameB6Ng01-200I17
Chromosome2 (Build37)
Map Location 87,872,998 - 87,874,089
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161
Downstream geneOlfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200I17.bB6Ng01-200I17.g
ACCGA021572GA021573
length1,2531,099
definitionB6Ng01-200I17.b B6Ng01-200I17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagaactactaagagctggctccccgagctcat
ctagtgacgagtatctcctagagacctccgctaattgatctttcttcttt
tccctttttcctctttttcttctaatctctctccaggtattcctacctaa
ccttaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatatttcctctttgctcctactctctctccccgctttact
tctgatagcttgtcctgaatttcctctagaatccgccctatcttaaccac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaacatattccactttacttctgatagactgtcttgaatttcc
ttagaaagttcaagatcagacttacctcgtaaagctgtactcactggtac
tctcgttccccagctgaaaagttctgaattcatacagttgaatccttctt
aacagtctgctttacgggaacctttattaccgcgacccgcagttctggtt
ctggaatgagggatcttccttgcgccagtcccgagttttttctcgtcccg
gaattcggcaccaattgttattagacgcgttctcacgaccggccaggaag
aacaccacagaccagaatcttctgcggcaaaactttattgcttacatctt
caggagccagggtgcaggaagcaagagagcaagaagcaagagagcaagaa
gccagagagcaagaagcaagagagcaagaagcaagagagagagagaaaac
gaaaaccccgtccctcttaaggagcattctccttcgcctcggacgtgtca
ctccctgattggctgcagcccatcgggccgagttgacgtcacgggggaag
gcagagcacaagtagtcataagataccctttggcacatgcgcagattatt
tgtttaccacttaagaacacagctgtcagcgccatcttggttacggcgaa
tggtggcgcggctcccaacatccaccactttggtcttcattctttgtcag
tttcatgtgtttttgccaaattgtatcttatatatctcaaggtataccta
agtttctggggcctatatcccactttatcagtgaagtaccatatcatgtg
aactcttttgtgattgggtgttacctcactccagaatgatgcccttcaca
ggatccatcccattgccctagagagaatttctacctttgaagtcatctcg
tta
gaattctcctaattgatcatctattagaggttaatggctcctggcagagg
aagagtcatttttcttcaaaagtatgaaggtttaatggctctctttcctg
acagtatatagataaaattttgtcataataatcatctttaaaaatggaag
aggaagaattaaattgtgaaaataatgtttttggagaaccctaggagaag
ttagaggtaagccttggagtgtaagtgatcaaatactgtatgcttctatg
aaattctcaatgaggaattaaaaaatattttaaaaaataatgctttgata
taacaaagtaactaaattgatgaaacttttttttttaggaacgaggatga
tattattattttcccaagaaattaaacgatgacactctccaaaatggtag
caattaatggctcttaaacaactggaatgtgccgggcggtggtggcacac
gcctttttttttttaaattaggtattttcctcatttacatttccaatgct
atcccaaaagtcccccataccctcccctccactcccctacccactcactc
ccactttagggcctggcattccccagtactggggcatataaagattgcaa
gtccaatgggcctctttccattgatggccgactaggccatcttttgatac
atatgcagctagagtcaagaattcccgggtactggttagttcataatgtt
gttccacctatagggttgcagacccctttagctccttggttactttctct
agctcctccattgggagccctgtgatccatccaatagctgactgtgagca
tccacttctgtgtttgctaggccccggcatagtttcacaagaggcagcta
tatctgggttcctttcagcaaaatcttgttagtgcatgcaatggtgtcag
catttggaagctgattatgaaattatttttcatttcggaaatatttgtac
agcttttaagttatgatctattggttaatgtatatgtcagaataaatcat
atataattcacctaaatattcttactacctatttaaccatggagtaaatt
aacatcttttctaggtttttctgagactgtatattttaattattaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87872998_87874089
seq2: B6Ng01-200I17.g_68_1166

seq1  GAATTCTCCTAATTGATCATCTATTAGAGGTTAATGGCTCCTGGCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAATTGATCATCTATTAGAGGTTAATGGCTCCTGGCAGAGG  50

seq1  AAGAGTCATTTTTCTTCAAAAGTATGAAGGTTTAATGGCTCTCTTTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCATTTTTCTTCAAAAGTATGAAGGTTTAATGGCTCTCTTTCCTG  100

seq1  ACAGTATATAGATAAAATTTTGTCATAATAATCATCTTTAAAAATGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATATAGATAAAATTTTGTCATAATAATCATCTTTAAAAATGGAAG  150

seq1  AGGAAGAATTAAATTGTGAAAATAATGTTTTTGGAGAACCCTAGGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAATTAAATTGTGAAAATAATGTTTTTGGAGAACCCTAGGAGAAG  200

seq1  TTAGAGGTAAGCCTTGGAGTGTAAGTGATCAAATACTGTATGCTTCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGTAAGCCTTGGAGTGTAAGTGATCAAATACTGTATGCTTCTATG  250

seq1  AAATTCTCAATGAGGAATTAAAAAATATTTTAAAAAATAATGCTTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCAATGAGGAATTAAAAAATATTTTAAAAAATAATGCTTTGATA  300

seq1  TAACAAAGTAACTAAATTGATGAAACTTTTTTTTTTAGGAACGAGGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGTAACTAAATTGATGAAACTTTTTTTTTTAGGAACGAGGATGA  350

seq1  TATTATTATTTTCCCAAGAAATTAAACGATGACACTCTCCAAAATGGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTTCCCAAGAAATTAAACGATGACACTCTCCAAAATGGTAG  400

seq1  CAATTAATGGCTCTTAAACAACTGGAATGTGCCGGGCGGTGGTGGCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATGGCTCTTAAACAACTGGAATGTGCCGGGCGGTGGTGGCACAC  450

seq1  GCCTTTTTTTTTTTAAATTAGGTATTTTCCTCATTTACATTTCCAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTTTTTTTAAATTAGGTATTTTCCTCATTTACATTTCCAATGCT  500

seq1  ATCCCAAAAGTCCCCCATACCCTCCCCTCCACTCCCCTACCCACTCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTCCCCCATACCCTCCCCTCCACTCCCCTACCCACTCACTC  550

seq1  CCACTTTAGGGCCTGGCATTCCCCAGTACTGGGGCATATAAAGATTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTAGGGCCTGGCATTCCCCAGTACTGGGGCATATAAAGATTGCAA  600

seq1  GTCCAATGGGCCTCTTTCCATTGATGGCCGACTAGGCCATCTTTTGATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATGGGCCTCTTTCCATTGATGGCCGACTAGGCCATCTTTTGATAC  650

seq1  ATATGCAGCTAGAGTCAAGAATTCCCGGGTACTGGTTAGTTCATAATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAGCTAGAGTCAAGAATTCCCGGGTACTGGTTAGTTCATAATGTT  700

seq1  GTTCCACCTATAGGGTTGCAGACCCCTTTAGCTCCTTGGTTACTTTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACCTATAGGGTTGCAGACCCCTTTAGCTCCTTGGTTACTTTCTCT  750

seq1  AGCTCCTCCATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCCATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGAGCA  800

seq1  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTTTCACAAGAGGCAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTTTCACAAGAGGCAGCTA  850

seq1  TATCTGGG-TCCTTTCAGCAAAATCTTGTTAGTGCATGCAATGGTGTCAG  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGGTTCCTTTCAGCAAAATCTTGTTAGTGCATGCAATGGTGTCAG  900

seq1  CATTTGGAAGCTGATTATGAAATTATTTTTCATTTCGGAAATATTTGTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAAGCTGATTATGAAATTATTTTTCATTTCGGAAATATTTGTAC  950

seq1  AGCTTTTAAGTTATGATCTATTGGTTAATGTATATGTCAG-ATAAATCAT  998
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGCTTTTAAGTTATGATCTATTGGTTAATGTATATGTCAGAATAAATCAT  1000

seq1  ATATA--TCACCTAAA-ATATCTACTA-CTATTTAACAAT-GAGTAAATT  1043
      |||||  ||||||||| ||   ||||| ||||||||| || |||||||||
seq2  ATATAATTCACCTAAATATTCTTACTACCTATTTAACCATGGAGTAAATT  1050

seq1  AAACATC-TTTCTA-GTTTTTCTGAGACCTGTAATATTTT-ATTATTAAT  1090
       |||||| |||||| |||||||||||| |||| ||||||| |||||||||
seq2  -AACATCTTTTCTAGGTTTTTCTGAGA-CTGT-ATATTTTAATTATTAAT  1097

seq1  AT  1092
      ||
seq2  AT  1099