BAC Information

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BAC

Clone NameB6Ng01-201F14
Chromosome2 (Build37)
Map Location 28,849,042 - 28,850,134
singlet/doubletsinglet
Overlap gene1700101E01Rik
Upstream geneCol5a1, Fcnb, Olfm1, Gm347, 1700007K13Rik, Mrps2, LOC665412, Gbgt1, Ralgds, Cel, Gtf3c5, Gfi1b, Tsc1, 1700026L06Rik, 1190002A17Rik, LOC665643, Gtf3c4, Ddx31, Barhl1, LOC100033452
Downstream geneLOC100039666, Ttf1, Setx, Ntng2, Crsp8, Rapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201F14.bB6Ng01-201F14.g
ACCGA022149GA022150
length6351,097
definitionB6Ng01-201F14.b B6Ng01-201F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagccacataggatgcagaatgagaccctatctcaaaaagcta
actaggagtttgcggggccagatgccccagtcccacagagaagatccata
ccgctctcagccttggctggaggagcttctttttgcagtgggtgaccgtc
aatgcagagactcataactggtcaacgtgcctggtgtaaatgagttctca
ggtgcagggagtcatctgcatcaacctccctctagccaagctcaaagaag
gcaaaaagaatgtaagaactggcagacaggaaggagagctgtgatgctga
cttccggacatgactggtggatgcatgagatcacagcatatgtgcttacc
agcacagcaggaagccagtcagaattccagcactgatgggggtgggtagg
gatcccaaagccccacccttatcagaggagctactggcagttgatggcag
ttgaagaagagaaggttcactatcctttgggaggatgggactgttgggag
cttgcttgttccctggtggatggccacacacctatgtgaacgtgggtggc
tctaaccagctcaggatgattagtagcaacaaataaaaataaagaggata
tgaagctggggagggagggggcaatagggaagttg
gaattcaaacccagtctgccccaccaagtcctcagtaccccttcatctcg
gattcagtgatgggcaaagtctgcccacgagtggctgggtggagtctgca
gcttctctgtgtgcctgcctcttcactaaaacaccgccccggtttgactg
tccagtaagtggactagtgaggagagatgtagaaacagcggccacttcag
aaagcagagctcaggagagatggctcagtggctatgagcactgactgctc
ttccagaggtcctgagttcaattcccagcaaccacgtggtagttcacaat
tatttgtaaataggatctgatgccctcttctggtgtgtctgaagatagct
atagtgtactcatataaatatatatatttttttaagaaagaaagaaacag
agcttaggcgagctggacacacattggctgtgtctcactgagtctggtaa
agtggtcaggaaaagagaggcatctttcaagtgaatccagcaggcgtcca
gcaaggcgaggggagctcaggaaatacaggggcttcctggacgcagaagg
ccccgcctctgcactggcgctatccagaggtggaggggaaaagcggcctg
acagaggggactctgggtccctccctgggctgtgtgacaccagctgagtg
tggcacgtgtgtgctcggggagctcctgacgctgaattctagactaggac
caacaagccatgacaggtgtcagggcagctgccgctgtgctgcaaggaga
ttcgaggccctgctggtcacttgctcttccatggcaaccccactctgaca
tctgtggagctgatgtcactgtcacaaatctcagctttgatgggcccacg
tgaatccccaagcaccctgcctttcatcttaggaaatgacaaaagaggtg
ggcttgcaaaagaggtctctggaccatcgatcgggctaggctatgaaagg
tcctggggcaggcagatgttgggacaccctcctccaaccaagatccaccc
accactgtcctctagcgaggaagaaacaaagaaaagaataaaccattagg
accaggccacccggtggcctcatacttttattccaagcagtcctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_28849042_28850134
seq2: B6Ng01-201F14.g_67_1163

seq1  GAATTCAAACCCAGTCTGCCCCACCAAGTCCTCAGTACCCCTTCATCTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCCAGTCTGCCCCACCAAGTCCTCAGTACCCCTTCATCTCG  50

seq1  GATTCAGTGATGGGCAAAGTCTGCCCACGAGTGGCTGGGTGGAGTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGTGATGGGCAAAGTCTGCCCACGAGTGGCTGGGTGGAGTCTGCA  100

seq1  GCTTCTCTGTGTGCCTGCCTCTTCACTAAAACACCGCCCCGGTTTGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTGTGTGCCTGCCTCTTCACTAAAACACCGCCCCGGTTTGACTG  150

seq1  TCCAGTAAGTGGACTAGTGAGGAGAGATGTAGAAACAGCGGCCACTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAAGTGGACTAGTGAGGAGAGATGTAGAAACAGCGGCCACTTCAG  200

seq1  AAAGCAGAGCTCAGGAGAGATGGCTCAGTGGCTATGAGCACTGACTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGCTCAGGAGAGATGGCTCAGTGGCTATGAGCACTGACTGCTC  250

seq1  TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACGTGGTAGTTCACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACGTGGTAGTTCACAAT  300

seq1  TATTTGTAAATAGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGATAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAAATAGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGATAGCT  350

seq1  ATAGTGTACTCATATAAATATATATATTTTTTTAAGAAAGAAAGAAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTACTCATATAAATATATATATTTTTTTAAGAAAGAAAGAAACAG  400

seq1  AGCTTAGGCGAGCTGGACACACATTGGCTGTGTCTCACTGAGTCTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGGCGAGCTGGACACACATTGGCTGTGTCTCACTGAGTCTGGTAA  450

seq1  AGTGGTCAGGAAAAGAGAGGCATCTTTCAAGTGAATCCAGCAGGCGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAGGAAAAGAGAGGCATCTTTCAAGTGAATCCAGCAGGCGTCCA  500

seq1  GCAAGGCGAGGGGAGCTCAGGAAATACAGGGGCTTCCTGGACGCAGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCGAGGGGAGCTCAGGAAATACAGGGGCTTCCTGGACGCAGAAGG  550

seq1  CCCCGCCTCTGCACTGGCGCTATCCAGAGGTGGAGGGGAAAAGCGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCCTCTGCACTGGCGCTATCCAGAGGTGGAGGGGAAAAGCGGCCTG  600

seq1  ACAGAGGGGACTCTGGGTCCCTCCCTGGGCTGTGTGACACCAGCTGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGGACTCTGGGTCCCTCCCTGGGCTGTGTGACACCAGCTGAGTG  650

seq1  TGGCACGTGTGTGCTCGGGGAGCTCCTGACGCTGAATTCTAGACTAGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGTGTGTGCTCGGGGAGCTCCTGACGCTGAATTCTAGACTAGGAC  700

seq1  CAACAAGCCATGACAGGTGTCAGGGCAGCTGCCGCTGTGCTGCAAGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGCCATGACAGGTGTCAGGGCAGCTGCCGCTGTGCTGCAAGGAGA  750

seq1  TTCGAGGCCCTGCTGGTCACTTGCTCTTCCATGGCAACCCCACTCTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGCCCTGCTGGTCACTTGCTCTTCCATGGCAACCCCACTCTGACA  800

seq1  TCTGTGGAGCTGATGTCACTGTCACAAATCTCAGCTTTGATGGG-CCACG  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTGTGGAGCTGATGTCACTGTCACAAATCTCAGCTTTGATGGGCCCACG  850

seq1  TGAATCCCCAAGCACCCTGCCTTTCATCTTAGGAAATGACAAAAGAGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGAATCCCCAAGCACCCTGCCTTTCATCTTAGGAAATGACAAAAGAGGTG  900

seq1  GGCTTGCAAAAGAGGTCTCTGGACCATCGATCGGGCTAGGCTATGAAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGCTTGCAAAAGAGGTCTCTGGACCATCGATCGGGCTAGGCTATG-AAAG  949

seq1  GTCCTGGGGCAGGCAGGATGTTGGGAACACCTCTCCAAACAAAGATCCAC  999
      ||||||||||||||| ||||||||||   ||||  | ||| |||||||||
seq2  GTCCTGGGGCAGGCA-GATGTTGGGACACCCTCCTCCAACCAAGATCCAC  998

seq1  C--ACACTGT-CTCTAGCGAAGGAAGAAACAAAGAAAAGAATAAACATTT  1046
      |   |||||| |||||||| ||||||||||||||||||||||||||  ||
seq2  CCACCACTGTCCTCTAGCG-AGGAAGAAACAAAGAAAAGAATAAACCATT  1047

seq1  AGGGACCAGGC--ACCGGTGG-CTCATACTTTTAATCCCAGCAGT-CTCA  1092
      | |||||||||   ||||||| |||||||||||| ||| |||||| ||||
seq2  A-GGACCAGGCCACCCGGTGGCCTCATACTTTTATTCCAAGCAGTCCTCA  1096

seq1  G  1093
      |
seq2  G  1097