BAC Information

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BAC

Clone NameB6Ng01-201H23
Chromosome2 (Build37)
Map Location 86,980,764 - 86,981,810
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110
Downstream geneOlfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201H23.bB6Ng01-201H23.g
ACCGA022252GA022253
length7991,046
definitionB6Ng01-201H23.b B6Ng01-201H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatgcagagaagctggaaacaatcccactaaa
atcatagccataatattagaacaaaattgcaggatgagtctgaggccaag
aagaaaaaactcagttagaagctgagagaagccaggtttaatcattcaac
atgcacaggcttttgagccagagcagcagcgaagaaccagggagtcacca
gaaagggtgaatttattcatcactaattcaacttaattacatcaggtgaa
taaaagttactttcacagtgtccttcttattgtgcaactaagaccatatc
aggctgagaaatatcagtgaaaggtggttgttcattcagattattttaat
gttgatatttttatgtttatgtgtatatgtgtgtgtttgacctgatgggc
tggaattatttataccctgtgttttcttgcatatagctaacttaatgaag
ttggaatttacctaatggcaccttcagtagggttgggtttatagatatat
attgctaaaattttgttttatcatataacatcctctgtcttgtgtctatg
ataattgaaattttttttccaagtacagcagtgtatgctggcatttgtgg
aatctttgagtttataacacatctatctgtccaggcatgtcctttctatc
cttatctgtttgtttgtttgtttgtttgtttgtttttgtattttgttttt
tgtttttggagacagggttttctctgtatagctctggctggtcactgga
gaattcacattattcctacataattttcattctaaagtggaccctgaata
aaagcatttatttcatcaacatcctctatcttttatgagaaagacggtat
tatttttttacaaaaaagatactaagagtttagctgttttcaagtgtttt
gtagtttaattatcataagctgacatggtacaaggtcaaaacatatatct
taaattatatgtacctgtctaccaaatcacatgaacttttccatttagtt
tcacatcaacttatataattgttaagtgacaaaaatatgttttaaatttc
aagagttcaggaagcagatcataaattaaaacatatacaaaaagataata
tcacatattggaacttttcagtaaataaaaaatgagaaatatattaatca
aaaaattatttaattctttgccactttggaaattattttcaaagtataaa
tattttggtttttaaactgtctaaagaagatctgtgtttttggtaaaata
tttgccatgaaaaggtgagggtttgcgttcaattcacagacctgtgttag
aaaaaacagccagttaaggtggcacacaatttttaataccactctgaatg
gcagagactattagattaggggagaaacttgccatcaagtatagcatact
ctgtaaggtccataccactgagagaacctttctcaaaaagtagggtagat
tatgcttcatgaacagtgccagggtttgctatctagcttctacatgtaaa
tacatacaggtaaagacaataacccccaaatactcatatgtctacaaaaa
tataaagaacttaagaatgctagaaattattatggaaagttgtgtggctt
tttaagacctgcctggactctgttaaatcatgtgtgtctttatacctcat
ataacaaatcacattgatgactagacagtatatctttgttaaaaaaaaaa
aaaacaattattttcatgttcctgtaactctaaataaacagattcacaga
cagttgaatttctgaatgtgatgaatcaagtgaagctgtatcatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86980764_86981810
seq2: B6Ng01-201H23.g_66_1111

seq1  GAATTCACATTATTCCTACATAATTTTCATTCTAAAGTGGACCCTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTATTCCTACATAATTTTCATTCTAAAGTGGACCCTGAATA  50

seq1  AAAGCATTTATTTCATCAACATCCTCTATCTTTTATGAGAAAGACGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTTATTTCATCAACATCCTCTATCTTTTATGAGAAAGACGGTAT  100

seq1  TATTTTTTTACAAAAAAGATACTAAGAGTTTAGCTGTTTTCAAGTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTACAAAAAAGATACTAAGAGTTTAGCTGTTTTCAAGTGTTTT  150

seq1  GTAGTTTAATTATCATAAGCTGACATGGTACAAGGTCAAAACATATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTAATTATCATAAGCTGACATGGTACAAGGTCAAAACATATATCT  200

seq1  TAAATTATATGTACCTGTCTACCAAATCACATGAACTTTTCCATTTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATATGTACCTGTCTACCAAATCACATGAACTTTTCCATTTAGTT  250

seq1  TCACATCAACTTATATAATTGTTAAGTGACAAAAATATGTTTTAAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAACTTATATAATTGTTAAGTGACAAAAATATGTTTTAAATTTC  300

seq1  AAGAGTTCAGGAAGCAGATCATAAATTAAAACATATACAAAAAGATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTCAGGAAGCAGATCATAAATTAAAACATATACAAAAAGATAATA  350

seq1  TCACATATTGGAACTTTTCAGTAAATAAAAAATGAGAAATATATTAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATTGGAACTTTTCAGTAAATAAAAAATGAGAAATATATTAATCA  400

seq1  AAAAATTATTTAATTCTTTGCCACTTTGGAAATTATTTTCAAAGTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATTTAATTCTTTGCCACTTTGGAAATTATTTTCAAAGTATAAA  450

seq1  TATTTTGGTTTTTAAACTGTCTAAAGAAGATCTGTGTTTTTGGTAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGTTTTTAAACTGTCTAAAGAAGATCTGTGTTTTTGGTAAAATA  500

seq1  TTTGCCATGAAAAGGTGAGGGTTTGCGTTCAATTCACAGACCTGTGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATGAAAAGGTGAGGGTTTGCGTTCAATTCACAGACCTGTGTTAG  550

seq1  AAAAAACAGCCAGTTAAGGTGGCACACAATTTTTAATACCACTCTGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAGCCAGTTAAGGTGGCACACAATTTTTAATACCACTCTGAATG  600

seq1  GCAGAGACTATTAGATTAGGGGAGAAACTTGCCATCAAGTATAGCATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACTATTAGATTAGGGGAGAAACTTGCCATCAAGTATAGCATACT  650

seq1  CTGTAAGGTCCATACCACTGAGAGAACCTTTCTCAAAAAGTAGGGTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGGTCCATACCACTGAGAGAACCTTTCTCAAAAAGTAGGGTAGAT  700

seq1  TATGCTTCATGAACAGTGCCAGGGTTTGCTATCTAGCTTCTACATGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTCATGAACAGTGCCAGGGTTTGCTATCTAGCTTCTACATGTAAA  750

seq1  TACATACAGGTAAAGACAATAACCCCCAAATACTCATATGTCTACAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAGGTAAAGACAATAACCCCCAAATACTCATATGTCTACAAAAA  800

seq1  TATAAAGAACTTAAGAATGCTAGAAATTATTATGGAAAGTTGTGTGGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAACTTAAGAATGCTAGAAATTATTATGGAAAGTTGTGTGGCTT  850

seq1  TTTAAGACCTGCCTGGACTCTGTTAAATCATGTGTGTCTTTATACCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACCTGCCTGGACTCTGTTAAATCATGTGTGTCTTTATACCTCAT  900

seq1  ATAACAAATCACATTGATGACTAGACAGTATATCTTTGTTAAAAAAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAATCACATTGATGACTAGACAGTATATCTTTGTTAAAAAAAAAA  950

seq1  AAAACAATTA-TTTCATGTTCCTGTAACTCTAAATAAACAGATTCACAGA  999
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATTATTTTCATGTTCCTGTAACTCTAAATAAACAGATTCACAGA  1000

seq1  CAGTTGAATTTCTGAATGTGATGAATCAGGTGAAGGCTGTAATCATAC  1047
      |||||||||||||||||||||||||||| ||||| ||||| |||||||
seq2  CAGTTGAATTTCTGAATGTGATGAATCAAGTGAA-GCTGT-ATCATAC  1046