BAC Information

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BAC

Clone NameB6Ng01-202C19
Chromosome2 (Build37)
Map Location 110,680,168 - 110,681,303
singlet/doubletsinglet
Overlap genenone
Upstream geneLin7c, Lgr4, Ccdc34, LOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C19.bB6Ng01-202C19.g
ACCGA022742GA022743
length3071,135
definitionB6Ng01-202C19.b B6Ng01-202C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atattttggggctggtgagagaaatgaagatgtttgcacaggcagaagaa
ttggccttagtaaagaatacagttacctgccttgtagcagtgggagagtg
aagtatatatcactagtgaagtatatatcactacatatgtgagcggatgt
gtgggacgggatgttttttcaaatcacttaagtgagacaggaagtgaagc
catcagctgagagtgagatttgaagaggaggtgttgaaagactgttgaaa
agttaagacaaaattgtcctctaggtaaatgagaggaaaaagtgtgtgtg
gttgtgt
gaattcctcattgctgacaaccgtctccagtgacaaccttctttaaatca
ctcttcagcatgacagctgaaagttctgccttccaccgcctgcctgatcc
attagctggagtcttacttcgtgagggctgcacaaagcatttgactggag
ggttttaaggcaactctttaaatgcctgggtatgaataatgattttaaaa
gaagagacaatgcacctctttataagaacttctctattgctttctattaa
tttattttagggggtggctgaagtacagcatggggctgcctcgtgtgtca
tgggttaatactgtcaatgtatgattcatctaagtgacatttaatcatat
gtcagtgacatttaatgatttgactgtcaatttttaataatctattgcat
atggtatttgaatgagctgactaggttgacataaaatgtgggtggtattt
ttagtttaaataacagaggtctcgcaatgtgacctttttcattggtgaac
ttatccatatttttttataacttagtggaatttaacaggatttcctttcc
ttttaagcatttatagaaacatttcttgtacttttattcaattaggaatg
gtacaatagaaacttcatgatttctggaaaatactgcatctgtgaaattt
ccagagcattgttttggctctgtgttggtataatatagactgattataac
ggaattaactgttacctcaaaacaaagaaaattcaccaattttatctcac
tgattacatttacttgatgagatgcaatggattatttgtcaaaaatactc
cttggtacagcattgaattgaaactaataagacattgaacctgagaaaca
accagttacttgatatagccttaaattaataattatgtttacaaatattt
tcttgctggttggtaaataagcaagttttcttatacagagtttgaggatg
cttagttataaatgacaattatggctgaaatcaatgcttgtaaatttcca
cagacatgctgtttcttagttaaagatactttttactatgcttaggagga
agattcacctgcagatggactgtgatgcactcattggagaaaaaccaacg
aattactgaatgtaggcttgagaaggaaaacaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110680168_110681303
seq2: B6Ng01-202C19.g_65_1199

seq1  GAATTCCTCATTGCTGACAACCGTCTCCAGTGACAACCTTCTTTAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTGCTGACAACCGTCTCCAGTGACAACCTTCTTTAAATCA  50

seq1  CTCTTCAGCATGACAGCTGAAAGTTCTGCCTTCCACCGCCTGCCTGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGCATGACAGCTGAAAGTTCTGCCTTCCACCGCCTGCCTGATCC  100

seq1  ATTAGCTGGAGTCTTACTTCGTGAGGGCTGCACAAAGCATTTGACTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGGAGTCTTACTTCGTGAGGGCTGCACAAAGCATTTGACTGGAG  150

seq1  GGTTTTAAGGCAACTCTTTAAATGCCTGGGTATGAATAATGATTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAAGGCAACTCTTTAAATGCCTGGGTATGAATAATGATTTTAAAA  200

seq1  GAAGAGACAATGCACCTCTTTATAAGAACTTCTCTATTGCTTTCTATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACAATGCACCTCTTTATAAGAACTTCTCTATTGCTTTCTATTAA  250

seq1  TTTATTTTAGGGGGTGGCTGAAGTACAGCATGGGGCTGCCTCGTGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAGGGGGTGGCTGAAGTACAGCATGGGGCTGCCTCGTGTGTCA  300

seq1  TGGGTTAATACTGTCAATGTATGATTCATCTAAGTGACATTTAATCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAATACTGTCAATGTATGATTCATCTAAGTGACATTTAATCATAT  350

seq1  GTCAGTGACATTTAATGATTTGACTGTCAATTTTTAATAATCTATTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGACATTTAATGATTTGACTGTCAATTTTTAATAATCTATTGCAT  400

seq1  ATGGTATTTGAATGAGCTGACTAGGTTGACATAAAATGTGGGTGGTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTTGAATGAGCTGACTAGGTTGACATAAAATGTGGGTGGTATTT  450

seq1  TTAGTTTAAATAACAGAGGTCTCGCAATGTGACCTTTTTCATTGGTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAAATAACAGAGGTCTCGCAATGTGACCTTTTTCATTGGTGAAC  500

seq1  TTATCCATATTTTTTTATAACTTAGTGGAATTTAACAGGATTTCCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATATTTTTTTATAACTTAGTGGAATTTAACAGGATTTCCTTTCC  550

seq1  TTTTAAGCATTTATAGAAACATTTCTTGTACTTTTATTCAATTAGGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCATTTATAGAAACATTTCTTGTACTTTTATTCAATTAGGAATG  600

seq1  GTACAATAGAAACTTCATGATTTCTGGAAAATACTGCATCTGTGAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATAGAAACTTCATGATTTCTGGAAAATACTGCATCTGTGAAATTT  650

seq1  CCAGAGCATTGTTTTGGCTCTGTGTTGGTATAATATAGACTGATTATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCATTGTTTTGGCTCTGTGTTGGTATAATATAGACTGATTATAAC  700

seq1  GGAATTAACTGTTACCTCAAAACAAAGAAAATTCACCAATTTTATCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAACTGTTACCTCAAAACAAAGAAAATTCACCAATTTTATCTCAC  750

seq1  TGATTACATTTACTTGATGAGATGCAATGGATTATTTGTCAAAAATACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATTTACTTGATGAGATGCAATGGATTATTTGTCAAAAATACTC  800

seq1  CTTGGTACAGCATTGAATTGAAACTAATAAGACATTGAACCTGAGAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTACAGCATTGAATTGAAACTAATAAGACATTGAACCTGAGAAACA  850

seq1  ACCAGTTACTTGATATAGCCTTAAATTAATAATTATGTTTACAAATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTACTTGATATAGCCTTAAATTAATAATTATGTTTACAAATATTT  900

seq1  TCTTGCTGGTTGGTAAAATAAGCAAGTTTTTCTTATACAAGAGTTTGAGG  950
      |||||||||||||| ||||||||||| ||||||||||| |||||||||||
seq2  TCTTGCTGGTTGGT-AAATAAGCAAG-TTTTCTTATAC-AGAGTTTGAGG  947

seq1  ATGCTTAGTTATAAATGACAATTATGGCTGAAATCAATGCTTGTAAAATT  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGCTTAGTTATAAATGACAATTATGGCTGAAATCAATGCTTGT-AAATT  996

seq1  TCCACAGACATGCTGTTTCTTAGTTAAAGATACTTTTTACCTATGCTTAG  1050
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCCACAGACATGCTGTTTCTTAGTTAAAGATACTTTTTA-CTATGCTTAG  1045

seq1  GAAGGAGATTCACCTGCCAGATGAACTGTGATGCACTCA-TGGAG-AAAA  1098
      || | ||||||||||| |||||| ||||||||||||||| ||||| ||||
seq2  GAGGAAGATTCACCTG-CAGATGGACTGTGATGCACTCATTGGAGAAAAA  1094

seq1  CCAACAGATTACTG-ATGTAGCCTTGAGA--GGAAACAAAT  1136
      |||||  ||||||| |||||| |||||||  | ||||||||
seq2  CCAACGAATTACTGAATGTAGGCTTGAGAAGGAAAACAAAT  1135