BAC Information

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BAC

Clone NameB6Ng01-203A02
Chromosome2 (Build37)
Map Location 75,628,042 - 75,752,163
singlet/doubletdoublet
Overlap geneLOC623453, Agps
Upstream geneMtx2, LOC667817, A330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik
Downstream geneTtc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A02.bB6Ng01-203A02.g
ACCGA023339GA023340
length1,121571
definitionB6Ng01-203A02.b B6Ng01-203A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,751,033 - 75,752,163)(75,628,042 - 75,628,617)
sequence
gaattccatttgtaataagttactcggctgcatgttgaagaggattaaaa
gatattaaattacacagatcccagaaaacatttatagtttataagcatta
ctatttccttcatcttcttttcccttctgacagtcagacatttaatatgc
tgtgactgccttggcagtgctgtccgaagtgaagaggaaactaatataaa
gcagtgagcagggcacaatcgcatcagtagtttctgatatgttgtaatac
ttattctcttggactgagtgtgtaacacccttgagaagaagaaaaatctt
tcaaattctctagcctaggtggccagtaatatttatatatggaaaacaca
ttatacaagattaaaaagcattaagtatataccttgtatcaaaaaaaaaa
aaaatcactaagggctagatagatagctcagctataaggcctgaggatca
gtgtctatcataaacaaagccacagggagtatttccataattcttgagac
caaaggttgataaatcaaaatcaatatataataggttaaaatttatactt
tttccaactattgcttattgactcacttgtggtactgtgtaatacaatga
tcttttataactttcacaagtaaaatccaaacttcgagtctctcttcacc
acagtctatttttctgcagcaagtgctttagagctgtgcgtggacaagta
ggctcctctgagacagcagctctatgcatctgagaagcaactgcagcacg
tgtctctccttgagaacctccaacacagctgctcctgggaaccctctatc
tcctctcagatgggagaaaaagaagcagagctcttgaccacagaaggcga
ccaggactctcctctgcactgcttcaggatcacttggtctccttcaatct
ttgcgaaacttctcacaaaatatgagtgacctattctaggacctattcca
caatcaaggaaacagtcatttactaatcaattccctaatgacattaggct
tctatcacccccttctctaacacgtgcatcctcactctctgttccctttg
tcatattatgatttttaaagaaggtataggtctagaagcatactagcttt
atgcaaataagacgtgtctgg
attacttacagagcatttgttctatatatctcccttctagcaagtagttt
tgtgatagcaaacaaattaaaatttattgcccatgaatcctaaggaggga
ttaaaaagcttgcttgtaagttacccagggctgtaattggacctgagggg
gcaatcaggggcggacacgggcgtcagagtcccctgtcaagttgaccggc
tggtcctgcatgtcagcatctccctctgctgcagctgtacacggaatacc
ctcatgaagtggaaaaccacgagtgccagcagttcttcggatcagcgcct
gtggttgactttcttggttctaatcaaaggtctcagacgtcttactggcc
cgtgtcaggtgcctgtcgtccttgatctctgagtgtggtccgggaagtaa
gagcatatgtacaaacaaaagtggttgtggccgtgtgggaagtgggagga
gggggcactggtatttatcaagagagcttttggaggccggtaatagcaca
gatgactctaattattaagaatcctagcacaattaaattttatctaattg
atgtatttaaataagtatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_75751033_75752163
seq2: B6Ng01-203A02.b_45_1165 (reverse)

seq1  CCAGACACGTCTTATGTGCAATTAAAAGCTAGGTATGCTTCTAGACCTTA  50
      ||||||||||||||| ||||    ||||||| ||||||||||||||| ||
seq2  CCAGACACGTCTTATTTGCA---TAAAGCTA-GTATGCTTCTAGACC-TA  45

seq1  TACCTTCTTTAAAAATCATTAAATATGACAAAGGGAACAGAGAGTGAGGA  100
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TACCTTCTTTAAAAATCAT--AATATGACAAAGGGAACAGAGAGTGAGGA  93

seq1  TGGCACGTTGTAGAGAAGGGGGTGATAGAAGCTTAAATTGTCATTTAGGG  150
      | ||||||  |||||||||||||||||||||| |||  ||||| ||||||
seq2  T-GCACGTGTTAGAGAAGGGGGTGATAGAAGCCTAA--TGTCA-TTAGGG  139

seq1  AATTGATTAGTAAATGACTGTTTCCTTGATTGTGGAATAGGTCCTAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTAGTAAATGACTGTTTCCTTGATTGTGGAATAGGTCCTAGAAT  189

seq1  AGGTCACTCATATTTTGTGAGAAGTTTCGCAAAGATTGAAGGAGACCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTCATATTTTGTGAGAAGTTTCGCAAAGATTGAAGGAGACCAAG  239

seq1  TGAT-CTGAAGCAGTGCAGAGGAGAGTCCTGGTCGCCTTCTGTGGTCAAG  299
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTGAAGCAGTGCAGAGGAGAGTCCTGGTCGCCTTCTGTGGTCAAG  289

seq1  AGCTCTGCTTCTTTTTCTCCCATCTGAGAGGAGATAGAGGGTTCCCAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCTTCTTTTTCTCCCATCTGAGAGGAGATAGAGGGTTCCCAGGA  339

seq1  GCAGCTGTGTTGGAGGTTCTCAAGGAGAGACACGTGCTGCAGTTGCTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGTGTTGGAGGTTCTCAAGGAGAGACACGTGCTGCAGTTGCTTCT  389

seq1  CAGATGCATAGAGCTGCTGTCTCAGAGGAGCCTACTTGTCCACGCACAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCATAGAGCTGCTGTCTCAGAGGAGCCTACTTGTCCACGCACAGC  439

seq1  TCTAAAGCACTTGCTGCAGAAAAATAGACTGTGGTGAAGAGAGACTCGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGCACTTGCTGCAGAAAAATAGACTGTGGTGAAGAGAGACTCGAA  489

seq1  GTTTGGATTTTACTTGTGAAAGTTATAAAAGATCATTGTATTACACAGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATTTTACTTGTGAAAGTTATAAAAGATCATTGTATTACACAGTA  539

seq1  CCACAAGTGAGTCAATAAGCAATAGTTGGAAAAAGTATAAATTTTAACCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGTGAGTCAATAAGCAATAGTTGGAAAAAGTATAAATTTTAACCT  589

seq1  ATTATATATTGATTTTGATTTATCAACCTTTGGTCTCAAGAATTATGGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATTGATTTTGATTTATCAACCTTTGGTCTCAAGAATTATGGAA  639

seq1  ATACTCCCTGTGGCTTTGTTTATGATAGACACTGATCCTCAGGCCTTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCCTGTGGCTTTGTTTATGATAGACACTGATCCTCAGGCCTTATA  689

seq1  GCTGAGCTATCTATCTAGCCCTTAGTGATTTTTTTTTTTTTTGATACAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTATCTATCTAGCCCTTAGTGATTTTTTTTTTTTTTGATACAAG  739

seq1  GTATATACTTAATGCTTTTTAATCTTGTATAATGTGTTTTCCATATATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATACTTAATGCTTTTTAATCTTGTATAATGTGTTTTCCATATATAA  789

seq1  ATATTACTGGCCACCTAGGCTAGAGAATTTGAAAGATTTTTCTTCTTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTGGCCACCTAGGCTAGAGAATTTGAAAGATTTTTCTTCTTCTC  839

seq1  AAGGGTGTTACACACTCAGTCCAAGAGAATAAGTATTACAACATATCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGTTACACACTCAGTCCAAGAGAATAAGTATTACAACATATCAGA  889

seq1  AACTACTGATGCGATTGTGCCCTGCTCACTGCTTTATATTAGTTTCCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTGATGCGATTGTGCCCTGCTCACTGCTTTATATTAGTTTCCTCT  939

seq1  TCACTTCGGACAGCACTGCCAAGGCAGTCACAGCATATTAAATGTCTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCGGACAGCACTGCCAAGGCAGTCACAGCATATTAAATGTCTGAC  989

seq1  TGTCAGAAGGGAAAAGAAGATGAAGGAAATAGTAATGCTTATAAACTATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAAGGGAAAAGAAGATGAAGGAAATAGTAATGCTTATAAACTATA  1039

seq1  AATGTTTTCTGGGATCTGTGTAATTTAATATCTTTTAATCCTCTTCAACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTCTGGGATCTGTGTAATTTAATATCTTTTAATCCTCTTCAACA  1089

seq1  TGCAGCCGAGTAACTTATTACAAATGGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  TGCAGCCGAGTAACTTATTACAAATGGAATTC  1121

seq1: chr2_75628042_75628617
seq2: B6Ng01-203A02.g_67_643

seq1  GAATTCATTACTTACAGAGCATTTGTTCTATATATCTCCCTTCTAGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTTACAGAGCATTTGTTCTATATATCTCCCTTCTAGCAAG  50

seq1  TAGTTTTGTGATAGCAAACAAATTAAAATTTATTGCCCATGAATCCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGTGATAGCAAACAAATTAAAATTTATTGCCCATGAATCCTAAG  100

seq1  GAGGGATTAAAAAGCTTGCTTGTAAGTTACCCAGGGCTGTAATTGGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATTAAAAAGCTTGCTTGTAAGTTACCCAGGGCTGTAATTGGACCT  150

seq1  GAGGGGGCAATCAGGGGCGGACACGGGCGTCAGAGTCCCCTGTCAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCAATCAGGGGCGGACACGGGCGTCAGAGTCCCCTGTCAAGTTG  200

seq1  ACCGGCTGGTCCTGCATGTCAGCATCTCCCTCTGCTGCAGCTGTACACGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGCTGGTCCTGCATGTCAGCATCTCCCTCTGCTGCAGCTGTACACGG  250

seq1  AATACCCTCATGAAGTGGAAAACCACGAGTGCCAGCAGTTCTTCGGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCTCATGAAGTGGAAAACCACGAGTGCCAGCAGTTCTTCGGATCA  300

seq1  GCGCCTGTGGTTGACTTTCTTGGTTCTAATCAAAGGTCTCAGACGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGTGGTTGACTTTCTTGGTTCTAATCAAAGGTCTCAGACGTCTTA  350

seq1  CTGGCCCGTGTCAGGTGCCTGTCGTCCTTGATCTCTGAGTGTGGTCCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCGTGTCAGGTGCCTGTCGTCCTTGATCTCTGAGTGTGGTCCGGG  400

seq1  AAGTAAGAGCATATGTACAAACAAAAGTGGTTGTGGCCGTGTGGGAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGCATATGTACAAACAAAAGTGGTTGTGGCCGTGTGGGAAGTG  450

seq1  GGAGGAGGGGGCACTGGTATTTATCAAGAGAGC-TTTGGAGGCCGGTAAT  499
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAGGAGGGGGCACTGGTATTTATCAAGAGAGCTTTTGGAGGCCGGTAAT  500

seq1  AGCACAGATGACTCTAATTATTAAGAATCCTAGCACAATTAAATTTTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGATGACTCTAATTATTAAGAATCCTAGCACAATTAAATTTTATC  550

seq1  TAATTGATGTATTTAATTAAGTATACT  576
      |||||||||||||||| ||||||||||
seq2  TAATTGATGTATTTAAATAAGTATACT  577