BAC Information

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BAC

Clone NameB6Ng01-203D06
Chromosome2 (Build37)
Map Location 125,938,606 - 125,939,753
singlet/doubletsinglet
Overlap genenone
Upstream geneMyef2, LOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2, Fgf7
Downstream geneDtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203D06.bB6Ng01-203D06.g
ACCGA023484GA023485
length1,1651,185
definitionB6Ng01-203D06.b B6Ng01-203D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagaagtatatgactaaggcaacctttatggttgaatggatgca
ttattgcattaggagatcgccatgattctatgggagcttggggcagatgt
ctttgaatacttcatccctagctggtggtactatcttaggaggtataacc
tgtatgtaagaaatgaggcctagctggcataagtaagtggctatggatga
actttccctgcctctgtcttctcactgtgacaactagccacaagcttctt
caccaagcccagggcctcagccaccatgcattctttcactgtgaaaccat
gcactaaaataaatctgcacttcctgaagttgttcactgtccaggatttg
gttcttgtgaggaacgcactgtgtgtttaactctgcaggtgacgttcctt
aaagtgtttactgtgagtctgatctaacggtgacaaaggacctcggtatt
gcttgtgtttacagggctatttctccattactgcaggacggtgtttccag
gtaaactcttcttggttgaaacttatcactccttccttagcatacaaggc
tttgagaagctgctggagtccagtggggatttccttgtatttgatacatt
gtttcactcttgaacttcattggcttggatcagtggttagtggccctttg
agattcacgcatatacaagtgtaagaagacttggcatgtcttctataacc
atttcattgaatattttcttctcgggtatccactttctcaagccagaact
gtgatcatgtaaaaatttgctcattaaatgtatcctagaaatcccacgtg
ctttaatttcattggtttttcttttttctctgtatgatttaaaaggactt
gtcttcaaaaacagttctttttctgctttatataatctgccagttcccta
attttaatttttttggtgctaacatctgtcaggttcttttaaaaatcatg
cctagatttgttgactctgaagattcagtcatctctctgctctctaagcc
ctctccttgtgcttttcttgaacctcactggattgctataagataatcat
ttgtaacatcccttcttctgggcaattatattaagggttccagttactag
agagaatcacgcctgggtcctccagtggtgtcattgtttcctctcttttt
ctttgtaacatctgt
gaattcagcatgtggtcgtggcccagccctgactatcttcagatggactc
atcaacagagccactttaggaaattgctcagtgttagggaaatggtcacc
aaatgcaccagcaggaagtgtgctcagtgctcgcacaaaactagacactg
tgagaatattgaataattcatggcgaaggagctaagaagagacttgcctc
cacagtgaagaataattagacatatgatcatcactgctttggatctaact
ggtgcattataaaaatgagaaacacaccccaaagatcaatttccatgtaa
tttaaatgttccatgaagttcaataatatttacagagttacaaaaatatc
cagaatccaagaaaagaaactaccaaagactttaatataattataattag
caggcataaagataatcaggaaaacagggacaagaaaacaaaacccaagc
aagtcaagaagttacattggcattagaataaagcagggagtgcacgaaag
caggcttcgtgatgtgtctcctatgttcccaaagttagacacgggagaaa
tataaataaaggcttagaaatgaaaactgcagcctctgagattaaaaaca
cactgacatggattaactacaaatcagaaattaaagaacagacacgtgaa
ctcacaggcatttcagtttaatgcgatttaatacaaactattaaaaacgg
agtagaaggaaaagaacatgctgaagtgaatggagcttaaatgttctgtg
gggcaatttaaatgatcaaatacttgagagtagattgtccaaggagagga
aagaagacacaggaacctcctggtgtcaataatgactcgaaactgcccag
atttgctgaagtctgtcatctacaaacccaagaaaaccagttagtcccac
gcacatcaacatgatgaaagtaatactaagagacatcaaatcaaacagct
caaaaccagaaacagcactgaatcctacctttagccagagccgctcataa
ttgacagctactggatacagaaaagcagttctcttcatgaagtacactga
gtgttatcaccacactctgacaggcccgacactcagggagtggggtgctg
cacagctggactcgaactttgttgtcacttggattggttgtgctttggac
gacggcaagttaataccgaaagttggcacgggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_125938606_125939753
seq2: B6Ng01-203D06.b_45_1209

seq1  GAATTCTAGAAGTATATGACTAAGGCAACCTTTATGGTTGAATGGATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAGTATATGACTAAGGCAACCTTTATGGTTGAATGGATGCA  50

seq1  TTATTGCATTAGGAGATCGCCATGATTCTATGGGAGCTTGGGGCAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCATTAGGAGATCGCCATGATTCTATGGGAGCTTGGGGCAGATGT  100

seq1  CTTTGAATACTTCATCCCTAGCTGGTGGTACTATCTTAGGAGGTATAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATACTTCATCCCTAGCTGGTGGTACTATCTTAGGAGGTATAACC  150

seq1  TGTATGTAAGAAATGAGGCCTAGCTGGCATAAGTAAGTGGCTATGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTAAGAAATGAGGCCTAGCTGGCATAAGTAAGTGGCTATGGATGA  200

seq1  ACTTTCCCTGCCTCTGTCTTCTCACTGTGACAACTAGCCACAAGCTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCTGCCTCTGTCTTCTCACTGTGACAACTAGCCACAAGCTTCTT  250

seq1  CACCAAGCCCAGGGCCTCAGCCACCATGCATTCTTTCACTGTGAAACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGCCCAGGGCCTCAGCCACCATGCATTCTTTCACTGTGAAACCAT  300

seq1  GCACTAAAATAAATCTGCACTTCCTGAAGTTGTTCACTGTCCAGGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAAATAAATCTGCACTTCCTGAAGTTGTTCACTGTCCAGGATTTG  350

seq1  GTTCTTGTGAGGAACGCACTGTGTGTTTAACTCTGCAGGTGACGTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGAGGAACGCACTGTGTGTTTAACTCTGCAGGTGACGTTCCTT  400

seq1  AAAGTGTTTACTGTGAGTCTGATCTAACGGTGACAAAGGACCTCGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTACTGTGAGTCTGATCTAACGGTGACAAAGGACCTCGGTATT  450

seq1  GCTTGTGTTTACAGGGCTATTTCTCCATTACTGCAGGACGGTGTTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTTTACAGGGCTATTTCTCCATTACTGCAGGACGGTGTTTCCAG  500

seq1  GTAAACTCTTCTTGGTTGAAACTTATCACTCCTTCCTTAGCATACAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTCTTCTTGGTTGAAACTTATCACTCCTTCCTTAGCATACAAGGC  550

seq1  TTTGAGAAGCTGCTGGAGTCCAGTGGGGATTTCCTTGTATTTGATACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAGCTGCTGGAGTCCAGTGGGGATTTCCTTGTATTTGATACATT  600

seq1  GTTTCACTCTTGAACTTCATTGGCTTGGATCAGTGGTTAGTGGCCCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTCTTGAACTTCATTGGCTTGGATCAGTGGTTAGTGGCCCTTTG  650

seq1  AGATTCACGCATATACAAGTGTAAGAAGACTTGGCATGTCTTCTATAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACGCATATACAAGTGTAAGAAGACTTGGCATGTCTTCTATAACC  700

seq1  ATTTCATTGAATATTTTCTTCTCGGGTATCCACTTTCTCAAGCCAGAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTGAATATTTTCTTCTCGGGTATCCACTTTCTCAAGCCAGAACT  750

seq1  GTGATCATGTAAAAATTTGCTCATTAAATGTATCCTAGAAATCCCACGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATGTAAAAATTTGCTCATTAAATGTATCCTAGAAATCCCACGTG  800

seq1  CTTTAATTTCATTGGTTTTTCTTTTTTCTCTGTATGATTTAAAAGGACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTCATTGGTTTTTCTTTTTTCTCTGTATGATTTAAAAGGACTT  850

seq1  GTCTTCAAAAACAGTTCTTTTTCTGCTTTATATAATCTGCCAGTTCCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAAAACAGTTCTTTTTCTGCTTTATATAATCTGCCAGTTCCCTA  900

seq1  ATTTTAATTTTTTTGGTGCTAACATCTGTCAGGTTCTTTTAAAAATCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTTTTTGGTGCTAACATCTGTCAGGTTCTTTTAAAAATCATG  950

seq1  CCTAGATTTGTTGACTCTGAAGATTCAGTCATCTCTCTGCTCTCTAAGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATTTGTTGACTCTGAAGATTCAGTCATCTCTCTGCTCTCTAAGCC  1000

seq1  CTCTCCTTGTGC-TCTCTTGAACCTCACTGGATTGCTATAAGATAATCAT  1049
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTGTGCTTTTCTTGAACCTCACTGGATTGCTATAAGATAATCAT  1050

seq1  TTGT-ACAT-CCTTC-TCT-GGCAA-TATA-TAAGGG-TCCAGTTACT--  1090
      |||| |||| ||||| ||| ||||| |||| |||||| ||||||||||  
seq2  TTGTAACATCCCTTCTTCTGGGCAATTATATTAAGGGTTCCAGTTACTAG  1100

seq1  AGAGAATCACGC--TGGTCCCTCAGTGGTGTCA-TGTTTCCT-TCTTTT-  1135
      ||||||||||||   |||||  ||||||||||| |||||||| |||||| 
seq2  AGAGAATCACGCCTGGGTCCTCCAGTGGTGTCATTGTTTCCTCTCTTTTT  1150

seq1  -CTTGT-ACATCTGT  1148
        |||| ||||||||
seq2  CTTTGTAACATCTGT  1165