BAC Information

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BAC

Clone NameB6Ng01-203F03
Chromosome2 (Build37)
Map Location 22,543,601 - 22,657,620
singlet/doubletdoublet
Overlap geneGad2, Apbb1ip
Upstream geneGpr158, LOC637235, Myo3a, LOC100041703, Myo3a
Downstream genePdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203F03.bB6Ng01-203F03.g
ACCGA023569GA023570
length641833
definitionB6Ng01-203F03.b B6Ng01-203F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,656,980 - 22,657,620)(22,543,601 - 22,544,434)
sequence
gaattcctgtctcactatgtgatgttacatcaagtagcctgccatgctct
catcaaatctctcaactcagaagcccccacctccaaaactgtgacaaaga
agaaaaaacttcttttctgtataactactcgactcagccattctgctata
gcttctgaaaatgtgtagtccaaaaaggggaaaaggtttaaagattttgg
tcttgagttttatattttttagtgaaaaaaaaaaaagatttcctctgtat
aaaatacttcctagtaaaattcccaatggcccagcctggggattagtttc
aaataggttttttttgttttgtttttgtttgtttgtttgtttgtttgttt
gtttttaatcttccaggctgtagagaggatattttctaaagatccataac
aattacaagtcacaacttcatcagttgttggagtaataaaagccatgtca
cctagactttggcaatctgtaccaggcagaaaatacttttcaagctatgt
aacagtccccataaagccgagactaccactttatccaatcagcaatggct
aaaccctgccacaagactactctaggactaatggcaaagagatttttcgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcagaaagccctctacagcttcttgcaccacgttaggaaaccaagg
aatgaaaaggtagtatgcctaccttccagcagcttacagatggggtagaa
agagaaaatgtagctgctcatcagtgaaggccagttaagaaattaggatg
ctgttagactctgtgtgtaaagtcccgtaggtacaactcagaagaagata
gttaatagtgggcacgaaagggtcccctgaggttgggacactgtggggga
aacctgcagaatacttaggatgtggagccttacagaggactgaagacatg
gactgggagaaagtaccacggtatgactgatgataggcatgaaatgatga
gaaatgtagatgcttcaaaggatatttaataaatggcccttgtcagagtt
gaaagctcgctttggttagcagttgaagatgaattgttggagctgatgag
aaaaagctggtttgcagagctggagagcacaagcttatttcgaaacagca
gagagaatccaggagctgcaatgaccgtcgtaacaaaagcactgtggtct
tgtcagagatgtctctctgtgcacgaaatcacaacacagctatttactcc
tagataagtctttatatcggtacagccttggggtttttttgggttttttt
ttggttttttggttttttgggttttttttttttttccgaaatacttgtaa
gtgaaaacaattttaaaaagaatgaaaagaaactagaaaagtttgggatc
acaaaaaagttgacagaagtgtgtttatttatttatctttctttaatgcc
tttgtgtggtagtagagggtgtccctaagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_22656980_22657620
seq2: B6Ng01-203F03.b_43_683 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACACACGAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACGAAAAAT  50

seq1  CTCTTTGCCATTAGTCCTAGAGTAGTCTTGTGGCAGGGTTTAGCCATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCCATTAGTCCTAGAGTAGTCTTGTGGCAGGGTTTAGCCATTGC  100

seq1  TGATTGGATAAAGTGGTAGTCTCGGCTTTATGGGGACTGTTACATAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGATAAAGTGGTAGTCTCGGCTTTATGGGGACTGTTACATAGCTT  150

seq1  GAAAAGTATTTTCTGCCTGGTACAGATTGCCAAAGTCTAGGTGACATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTATTTTCTGCCTGGTACAGATTGCCAAAGTCTAGGTGACATGGC  200

seq1  TTTTATTACTCCAACAACTGATGAAGTTGTGACTTGTAATTGTTATGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTACTCCAACAACTGATGAAGTTGTGACTTGTAATTGTTATGGAT  250

seq1  CTTTAGAAAATATCCTCTCTACAGCCTGGAAGATTAAAAACAAACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAAATATCCTCTCTACAGCCTGGAAGATTAAAAACAAACAAACA  300

seq1  AACAAACAAACAAACAAAAACAAAACAAAAAAAACCTATTTGAAACTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAAAACAAAACAAAAAAAACCTATTTGAAACTAAT  350

seq1  CCCCAGGCTGGGCCATTGGGAATTTTACTAGGAAGTATTTTATACAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCTGGGCCATTGGGAATTTTACTAGGAAGTATTTTATACAGAGG  400

seq1  AAATCTTTTTTTTTTTTCACTAAAAAATATAAAACTCAAGACCAAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTTTTTTTTTCACTAAAAAATATAAAACTCAAGACCAAAATCT  450

seq1  TTAAACCTTTTCCCCTTTTTGGACTACACATTTTCAGAAGCTATAGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTTTTCCCCTTTTTGGACTACACATTTTCAGAAGCTATAGCAGA  500

seq1  ATGGCTGAGTCGAGTAGTTATACAGAAAAGAAGTTTTTTCTTCTTTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGAGTCGAGTAGTTATACAGAAAAGAAGTTTTTTCTTCTTTGTCA  550

seq1  CAGTTTTGGAGGTGGGGGCTTCTGAGTTGAGAGATTTGATGAGAGCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGGAGGTGGGGGCTTCTGAGTTGAGAGATTTGATGAGAGCATGG  600

seq1  CAGGCTACTTGATGTAACATCACATAGTGAGACAGGAATTC  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTACTTGATGTAACATCACATAGTGAGACAGGAATTC  641

seq1: chr2_22543601_22544434
seq2: B6Ng01-203F03.g_61_893

seq1  GAATTCAGAAAGCCCTCTACAGCTTCTTGCACCACGTTAGGAAACCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGCCCTCTACAGCTTCTTGCACCACGTTAGGAAACCAAGG  50

seq1  AATGAAAAGGTAGTATGCCTACCTTCCAGCAGCTTACAGATGGGGTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAGGTAGTATGCCTACCTTCCAGCAGCTTACAGATGGGGTAGAA  100

seq1  AGAGAAAATGTAGCTGCTCATCAGTGAAGGCCAGTTAAGAAATTAGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATGTAGCTGCTCATCAGTGAAGGCCAGTTAAGAAATTAGGATG  150

seq1  CTGTTAGACTCTGTGTGTAAAGTCCCGTAGGTACAACTCAGAAGAAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGACTCTGTGTGTAAAGTCCCGTAGGTACAACTCAGAAGAAGATA  200

seq1  GTTAATAGTGGGCACGAAAGGGTCCCCTGAGGTTGGGACACTGTGGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGTGGGCACGAAAGGGTCCCCTGAGGTTGGGACACTGTGGGGGA  250

seq1  AACCTGCAGAATACTTAGGATGTGGAGCCTTACAGAGGACTGAAGACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCAGAATACTTAGGATGTGGAGCCTTACAGAGGACTGAAGACATG  300

seq1  GACTGGGAGAAAGTACCACGGTATGACTGATGATAGGCATGAAATGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGAGAAAGTACCACGGTATGACTGATGATAGGCATGAAATGATGA  350

seq1  GAAATGTAGATGCTTCAAAGGATATTTAATAAATGGCCCTTGTCAGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAGATGCTTCAAAGGATATTTAATAAATGGCCCTTGTCAGAGTT  400

seq1  GAAAGCTCGCTTTGGTTAGCAGTTGAAGATGAATTGTTGGAGCTGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTCGCTTTGGTTAGCAGTTGAAGATGAATTGTTGGAGCTGATGAG  450

seq1  AAAAAGCTGGTTTGCAGAGCTGGAGAGCACAAGCTTATTTCGAAACAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTGGTTTGCAGAGCTGGAGAGCACAAGCTTATTTCGAAACAGCA  500

seq1  GAGAGAATCCAGGAGCTGCAATGACCGTCGTAACAAAAGCACTGTGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAATCCAGGAGCTGCAATGACCGTCGTAACAAAAGCACTGTGGTCT  550

seq1  TGTCAGAGATGTCTCTCTGTGCACGAAATCACAACACAGCTATTTACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGATGTCTCTCTGTGCACGAAATCACAACACAGCTATTTACTCC  600

seq1  TAGATAAGTCTTTATATCGGTACAGCCTTGGGGTTTTTTTGGGTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGTCTTTATATCGGTACAGCCTTGGGGTTTTTTTGGGTTTTTTT  650

seq1  TTGGTTTTTTGGTTTTTTGGG-TTTTTTTTTTTTTCCGAAATACTTGTAA  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGGTTTTTTGGTTTTTTGGGTTTTTTTTTTTTTTCCGAAATACTTGTAA  700

seq1  GTGAAAACAATTTTAAAAAGAATGAAAAGAAACTAGAAAAGTTTAGGATC  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGAAAACAATTTTAAAAAGAATGAAAAGAAACTAGAAAAGTTTGGGATC  750

seq1  ACAAAAAAGTTGACAGAAGTGTGTTTATTTATTTATTTTTCTTTAATGCC  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAAAAAAGTTGACAGAAGTGTGTTTATTTATTTATCTTTCTTTAATGCC  800

seq1  TTTGTGTGGTAGTAGGGGGTGTACCCTTTAGGGGA  834
      ||||||||||||||| ||||||  || | ||||||
seq2  TTTGTGTGGTAGTAGAGGGTGT--CCCTAAGGGGA  833