BAC Information

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BAC

Clone NameB6Ng01-203J08
Chromosome2 (Build37)
Map Location 142,098,475 - 142,099,600
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203J08.bB6Ng01-203J08.g
ACCGA023759GA023760
length1,1251,169
definitionB6Ng01-203J08.b B6Ng01-203J08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccattttagtgtttgaataataaaatcaagactgtacttaga
ggatctttgaggaggtgctagggttaattttgaggtggtatatttttata
ggtacatgtggtagaactctgctaaaaacttgacatttcataaggagaca
cacaacacacaaggtcatgttttgattagacaaagacatcaggaaataca
cacgcacacacatatacatacatatctatgcatatatatgcacatatata
tgaatgaatgcatatatatgtgtgtatgcatatatatgtgtatatatata
tatatatatacatatttatattctttaggcagtgatatatttgttaaatt
cagagtccacatgaaactgatcttgcttaggcatcctcaggcctaaagat
tatagcatccttgaagatgttggtagatgttccttagtaagagagttcag
gagtcaattagaacctttggaaactacaaagttaggcagtttctatggca
ctgcatttctcagaacgcttagcatgtaacatgaattgagaagctcagag
aaaattatgtatgtagcatttgctatgtaaattaatcaaacccaatcatt
aaatattttatgtattgtttttacttttatggtagcacatgattattgag
catcccaaaacatcgttggtaagcaacccataaaaaattaaagaatattg
cttaaagtttttattttgtgatgtcatagtatttatgatacaaaataagc
aaaggtacaaattacttttgaaaatggcagttttgaatttatcctcactc
agtggttctggggaacaattcacagacatttcaggaagagatttttctgg
tcctcgctctcaataatagatgtgcacagcataaatgtgttgctgtctcc
taaaggtgtttgattttcttttctgccacgtgtgtgtttctttggtattt
gtgagcaggtattagtgtgtgcactttggtgttgtggcctttttagagac
atgaggtggatgttcagagtctttcttccaatactttcacttattttatg
aggcaggttttcttactgaactgaaagcatcagttgcttaggcttgacag
ctagtcagtttccgtatgtactttc

gaattcctttttgatgtcctattaaactggattgttagtattttgttgag
catttttgcatcagggatattgctctgtatcctgtccccttcttcccttc
tgtcttccctctgtccatctctagcccctcttttctctgccttttatggc
cttgcctgatttttttagtcaaggttatgctggccttatagaatgatttt
ggaagggctcccactttcagctctataaaatagtttgagaagggttggca
tgagttctttaaaagaagtttggcacaattcctcagtgaagctatctgtt
cctgggcatttctttgttaagagactttatctcatgaattcagtcttatc
tcttgtagtgtggctgcttaaatgcactgttgtcctcttggtttactttg
gtggggcatatgtatctagtttctctaggtttccaaacttgtcatcacat
aatcataatgatccctaatgattcttggtatcctgtggtgactgttgtaa
tgtttactgtttagtctacaaatgtagttctcttcagtcatgtctttttc
tgttagttaattccgataaaggttttttaactttttttttcttgtcaaag
cactagctctgtttcattgaatcttttttcattttttaaaaagatttatt
tattttatgtgtacaaatacattgcagctgtcttcagacacaccagaaga
gggcatcaggtttcattacatatggtagtgagctaccatatggttggtgg
gaattgaattcaggacctctggaagaacagtcagtgcttttatctgctga
gccgtctctctagcccgaatcttttcatttttaaagcctttttttattca
ttttggcactgatgtcagcttcccttcttcttggtttgggcctcactctt
ctaagtcttgggatgcatcataaatgttatcaaatcttcctaatgtcact
gaggcagcatgctatacatctcatagaaagtagtaatttgtcctagcctt
tgagaatgatgatatacctgcaaatattagaggacctaccgccttattac
ataattcaaaccttgtaggaatcatttaatttagtagtctgctcatcttc
cgttcttactgaacgcactaagacgtcgtctggggataataggtactaca
tatgcgcgtggccctgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142098475_142099600
seq2: B6Ng01-203J08.b_44_1168

seq1  GAATTCAACCATTTTAGTGTTTGAATAATAAAATCAAGACTGTACTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCATTTTAGTGTTTGAATAATAAAATCAAGACTGTACTTAGA  50

seq1  GGATCTTTGAGGAGGTGCTAGGGTTAATTTTGAGGTGGTATATTTTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTGAGGAGGTGCTAGGGTTAATTTTGAGGTGGTATATTTTTATA  100

seq1  GGTACATGTGGTAGAACTCTGCTAAAAACTTGACATTTCATAAGGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATGTGGTAGAACTCTGCTAAAAACTTGACATTTCATAAGGAGACA  150

seq1  CACAACACACAAGGTCATGTTTTGATTAGACAAAGACATCAGGAAATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACACAAGGTCATGTTTTGATTAGACAAAGACATCAGGAAATACA  200

seq1  CACGCACACACATATACATACATATCTATGCATATATATGCACATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCACACACATATACATACATATCTATGCATATATATGCACATATATA  250

seq1  TGAATGAATGCATATATATGTGTGTATGCATATATATGTGTATATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATGCATATATATGTGTGTATGCATATATATGTGTATATATATA  300

seq1  TATATATATACATATTTATATTCTTTAGGCAGTGATATATTTGTTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATACATATTTATATTCTTTAGGCAGTGATATATTTGTTAAATT  350

seq1  CAGAGTCCACATGAAACTGATCTTGCTTAGGCATCCTCAGGCCTAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCCACATGAAACTGATCTTGCTTAGGCATCCTCAGGCCTAAAGAT  400

seq1  TATAGCATCCTTGAAGATGTTGGTAGATGTTCCTTAGTAAGAGAGTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATCCTTGAAGATGTTGGTAGATGTTCCTTAGTAAGAGAGTTCAG  450

seq1  GAGTCAATTAGAACCTTTGGAAACTACAAAGTTAGGCAGTTTCTATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAATTAGAACCTTTGGAAACTACAAAGTTAGGCAGTTTCTATGGCA  500

seq1  CTGCATTTCTCAGAACGCTTAGCATGTAACATGAATTGAGAAGCTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTCTCAGAACGCTTAGCATGTAACATGAATTGAGAAGCTCAGAG  550

seq1  AAAATTATGTATGTAGCATTTGCTATGTAAATTAATCAAACCCAATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGTATGTAGCATTTGCTATGTAAATTAATCAAACCCAATCATT  600

seq1  AAATATTTTATGTATTGTTTTTACTTTTATGGTAGCACATGATTATTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTATGTATTGTTTTTACTTTTATGGTAGCACATGATTATTGAG  650

seq1  CATCCCAAAACATCGTTGGTAAGCAACCCATAAAAAATTAAAGAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAAAACATCGTTGGTAAGCAACCCATAAAAAATTAAAGAATATTG  700

seq1  CTTAAAGTTTTTATTTTGTGATGTCATAGTA-TTATGATACAAAATAAGC  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTAAAGTTTTTATTTTGTGATGTCATAGTATTTATGATACAAAATAAGC  750

seq1  AAAGGTACAAATTACTTTTGAAAATGGCAGTTTTGAATTTATCCTCACTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACAAATTACTTTTGAAAATGGCAGTTTTGAATTTATCCTCACTC  800

seq1  AGTGGTTCTGGGGAACAATTCACAGACATTTCAGGAAGAGATTTTTCTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTCTGGGGAACAATTCACAGACATTTCAGGAAGAGATTTTTCTGG  850

seq1  TCCTCGCTCTCAATAATAGATGTGCACAGCATAAATGTGTTGCTGTCTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGCTCTCAATAATAGATGTGCACAGCATAAATGTGTTGCTGTCTCC  900

seq1  TAAAGGTGTTTGATTTTCTTTTCTGCCACGTGTGTGTTTCTTTGGTA-TT  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAAGGTGTTTGATTTTCTTTTCTGCCACGTGTGTGTTTCTTTGGTATTT  950

seq1  GTGAGCAGGTA-TAGTGTGTGCACTTTGGTG-TGTGGGC-TTTTAGAGAC  995
      ||||||||||| ||||||||||||||||||| ||||| | ||||||||||
seq2  GTGAGCAGGTATTAGTGTGTGCACTTTGGTGTTGTGGCCTTTTTAGAGAC  1000

seq1  ATGAGGTGGATGTCAGGTGTCTTTC-TCCAATACTTTCCACCTTTATTTT  1044
      |||||||||||||   | ||||||| ||||||||||| |||  |||||||
seq2  ATGAGGTGGATGTTCAGAGTCTTTCTTCCAATACTTT-CAC--TTATTTT  1047

seq1  TTGAGGCAGGGTTTCTTACTGAACCTGAAAAGCATCAGTTTGCCTAGGCT  1094
       ||||||||| |||||||||||| ||| |||||||||| |||| ||||||
seq2  ATGAGGCAGGTTTTCTTACTGAA-CTG-AAAGCATCAG-TTGCTTAGGCT  1094

seq1  GGCAGGCTAGTCAGTTTCGGTATGTATCTTTC  1126
       |   ||||||||||||| ||||||| |||||
seq2  TGACAGCTAGTCAGTTTCCGTATGTA-CTTTC  1125


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