BAC Information

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BAC

Clone NameB6Ng01-203L17
Chromosome2 (Build37)
Map Location 56,214,040 - 56,215,235
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnj3
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203L17.bB6Ng01-203L17.g
ACCGA023864GA023865
length2981,177
definitionB6Ng01-203L17.b B6Ng01-203L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aatgtcctactttctataaaaaagtaggtcatacatgcagaaaggaaatg
tggataacagtataaatagtattgttgttcttcctatggagttgtaaacc
ccttcagctccttcagtctttcccctaactcctccattgggttttgtttg
atggttggctgtattgttcaggctccggtggtacctctcaggggacagct
gtaccaggctccagtcagcaagcacatcttggaatcagtgagagtggtgg
agagcaccctcatagaagcagggggaaggagggatgggataggggatt
gaattctattgacctacaacttttttagaaatttgtgtattatattacag
attgaagatacacagtgaattaacattttaaaaaaataagtgtcttaaac
cttagacttgaaatatctgtactcagtcaggaaccttgcacaaatataat
tcttcaaatgactatgaaactgtgtttataataataactaaagaaaatat
acttaaaatataaatttctttagtagtctaaactgttatttttgtcttta
tggaaggatcacaactataattaatgcataacaaaagaatttgcattgtg
agtggtttaattattcatttagtgactaatgctggctaccactaatacac
ttttttaaaaaaaggaaaaccaactatttaatcactctaaatgtttcata
aattaaagggcttttaagggctaccacttacattcaaaacttttaacata
catttctaattactaaaaattagaaacgacagattataatttttttcatg
gagtagaatccataaatgtttatatggtggttattttcctgattgttatt
atcagtactagttaagtgagtcatgtattagatatatgaaatgaattata
aatttcagtattgtggaaacattacccaaataccttattttttcttaaat
acccaggatttgtgtaacagccccttcgtctccaaccaatataatcgctt
ttcattggaaaatcttgtgatgacttagtatctgtaagctttctggttaa
gtcttacaaatactccttttaggatttattgagaacgaaaaatccagaag
tctgagaaaaaaaaaaagatgataaaactgatgctttgttgctgttgggc
tacaaacacaactttggttgtatgtaatgctaccaaaaccaacagcccta
atttatctaaccttctgatagtgaatgaacaaaggtaaaaataacagcta
gttataaactagtactatggcaatgacattgtgattatttaaaaagggca
taattcatgtgaccatagagtcatcatcataatagaacattgatgagaaa
gagtttcagccacttctattctgcagagaacattctattctcacagtagc
ctatgagtgcgggtgaactgatgttactgcatgtgcgtacatgaccgaag
ggatgcatctctcacattagaatcgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56214040_56215235
seq2: B6Ng01-203L17.g_65_1241

seq1  GAATTCTATTGACCTACAACTTTTTTAGAAATTTGTGTATTATATTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGACCTACAACTTTTTTAGAAATTTGTGTATTATATTACAG  50

seq1  ATTGAAGATACACAGTGAATTAACATTTTAAAAAAATAAGTGTCTTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATACACAGTGAATTAACATTTTAAAAAAATAAGTGTCTTAAAC  100

seq1  CTTAGACTTGAAATATCTGTACTCAGTCAGGAACCTTGCACAAATATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACTTGAAATATCTGTACTCAGTCAGGAACCTTGCACAAATATAAT  150

seq1  TCTTCAAATGACTATGAAACTGTGTTTATAATAATAACTAAAGAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATGACTATGAAACTGTGTTTATAATAATAACTAAAGAAAATAT  200

seq1  ACTTAAAATATAAATTTCTTTAGTAGTCTAAACTGTTATTTTTGTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAATATAAATTTCTTTAGTAGTCTAAACTGTTATTTTTGTCTTTA  250

seq1  TGGAAGGATCACAACTATAATTAATGCATAACAAAAGAATTTGCATTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATCACAACTATAATTAATGCATAACAAAAGAATTTGCATTGTG  300

seq1  AGTGGTTTAATTATTCATTTAGTGACTAATGCTGGCTACCACTAATACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTAATTATTCATTTAGTGACTAATGCTGGCTACCACTAATACAC  350

seq1  TTTTTTAAAAAAAGGAAAACCAACTATTTAATCACTCTAAATGTTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAAAAGGAAAACCAACTATTTAATCACTCTAAATGTTTCATA  400

seq1  AATTAAAGGGCTTTTAAGGGCTACCACTTACATTCAAAACTTTTAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGGGCTTTTAAGGGCTACCACTTACATTCAAAACTTTTAACATA  450

seq1  CATTTCTAATTACTAAAAATTAGAAACGACAGATTATAATTTTTTTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAATTACTAAAAATTAGAAACGACAGATTATAATTTTTTTCATG  500

seq1  GAGTAGAATCCATAAATGTTTATATGGTGGTTATTTTCCTGATTGTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAATCCATAAATGTTTATATGGTGGTTATTTTCCTGATTGTTATT  550

seq1  ATCAGTACTAGTTAAGTGAGTCATGTATTAGATATATGAAATGAATTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTACTAGTTAAGTGAGTCATGTATTAGATATATGAAATGAATTATA  600

seq1  AATTTCAGTATTGTGGAAACATTACCCAAATACCTTATTTTTTCTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTATTGTGGAAACATTACCCAAATACCTTATTTTTTCTTAAAT  650

seq1  ACCCAGGATTTGTGTAACAGCCCCTTCGTCTCCAACCAATATAATCGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGATTTGTGTAACAGCCCCTTCGTCTCCAACCAATATAATCGCTT  700

seq1  TTCATTGGAAAATCTTGTGATGACTTAGTATCTGTAAGCTTTCTGGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGGAAAATCTTGTGATGACTTAGTATCTGTAAGCTTTCTGGTTAA  750

seq1  GTCTTACAAATACTCCTTTTAGGATTTATTGAGAACGAAAAATCCAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACAAATACTCCTTTTAGGATTTATTGAGAACGAAAAATCCAGAAG  800

seq1  TCTGAGAAAAAAAAAAAGATGATAAAACTGATGCTTTGTTGCTGTTGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAAAAAAAAAAGATGATAAAACTGATGCTTTGTTGCTGTTGGGC  850

seq1  TACAAACACAACTTTGGTTGTATGTAATGCTACCAAAACCAACAGCCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACAAACACAACTTTGGTTGTATGTAATGCTACCAAAACCAACAGCCCT-  899

seq1  AATTTATCTAACCTTCTGATAGTGAATGAACAAAGGTAAAAATAACAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATTTATCTAACCTTCTGATAGTGAATGAACAAAGGTAAAAATAACA-GC  948

seq1  TAGTTATAAACTAGTACTATGGCAATGACATTGTGAATTATTTAAAAAGG  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTTATAAACTAGTACTATGGCAATGACATTGTG-ATTATTTAAAAAGG  997

seq1  GCATATTCAATGTGACCATAGAGCCATCAATCATAATAG-ACATTGATGA  1049
      ||||| |  |||||||||||||| |||| |||||||||| ||||||||||
seq2  GCATAATTCATGTGACCATAGAGTCATC-ATCATAATAGAACATTGATGA  1046

seq1  GAAAAGAGGTTTCAGCCACTTCCTATCTGCAAGGAGAACAATTCTA-TCT  1098
      | ||||| ||||||||||||||   ||||||  |||||| |||||| |||
seq2  G-AAAGA-GTTTCAGCCACTTCTATTCTGCA--GAGAAC-ATTCTATTCT  1091

seq1  CACAGGTAG-CTATGAAGTGCCGGGTGACCTGATGTCACCTGCATTGTTG  1147
      |||| |||| ||||| |||| ||||||| ||||||| | ||||||   ||
seq2  CACA-GTAGCCTATG-AGTG-CGGGTGAACTGATGTTA-CTGCAT--GTG  1135

seq1  CTGTACCCTTTGAACGAAGTGAGTAGATTCTCTCAATATTAGAATCGAA  1196
      | ||||    ||| ||||| ||   |  |||||| | ||||||||||||
seq2  C-GTAC---ATGACCGAAGGGA--TGCATCTCTC-ACATTAGAATCGAA  1177