BAC Information

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BAC

Clone NameB6Ng01-203N10
Chromosome2 (Build37)
Map Location 46,563,273 - 46,721,358
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041337, LOC666604, LOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203N10.bB6Ng01-203N10.g
ACCGA023946GA023947
length9541,113
definitionB6Ng01-203N10.b B6Ng01-203N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,720,836 - 46,721,358)(46,563,273 - 46,564,390)
sequence
gaattctttaattcgtattctgttatacttttttttaaaacacagtgtct
tctcatacagaccactgtttcccctccctccacttccttcagcttccccc
ttgcttcccctctcccaaagatccacttctactccatttcctcttcagta
aacaggaggcctctaagatataatagccaaacaggacaaaacaagacaca
gtaagacaaggcaaaaaccctcatatggaagatggacaagacaacacaaa
agaagaaaaaagagtcccaagaacaggcaaatgagttagaaatgcaccct
cttccactgttaggagtcccacagaaacatcaaactaacagcttagcaca
tatgcagaggacttggtacacacccttgcaaccccatgacttctgcttca
gtctctgtgagcccatataagccttgattaatttattttgtggaccatgt
tcccttggtaccctccacccaccatgactactatagtctttcctcctttt
cgtcctcagggttccccaatctccaagaagacagatcaggtggagatttc
caatttagaccctctctccacataatgtctggctatgggtctctggaccg
aagcctctctgatgactggacaagtcaccattctatgtgtatagcagaat
atcaataggaatcaattcaatgtttttttttttttaaatttttatgtttt
gcaagctgtgtttgtctgatctatccaatctgctggttcctatccttcca
ggcagtataaggcatggactccctctataggcatggacttcaagttaaac
agaagattatttggccactcctacaaattctgtaccacaattgcctcttc
tgatcttgttggcaggacagactttaggtctattgttttgtgtctgagtt
ggtgtccaggttttttttctcctcatcctgcagagtaacttttaccacaa
aata

gaattcaagaaaaaatagtggattaggaatctaataaaacctgatagctt
ttgattttttgttttagttaatgttatttactgtaaatattctgctcaaa
acagttgcatatttgatgttctttgtgcttttaaaattaatttctgataa
caaccagtgtcctgtgtaaggccatatatgatgaaatattaatattagct
ctgttatataatttattttaaaaccaatctgattcttttgatgttgatga
tgttgccatttacattgataatgttcacaatagtaattgttgtatatttc
tttgcacaactctgactaattctttactgacacatcagccatttaaaaca
aaagttgacatggccagagtcagagtgatcttgtggctaggcagaatgtt
caggagcaggatccacaaaagcttcaggatactgcacaactccttcctct
caatgctggctttcagatcaccaggcatgagtgttgggaaagatagacag
agagcggtagtggacagaggtagaactagatatatgccaagtatgagaaa
atgtttcaatagacaaggatcatatcgttactgagtggggccagcagagc
agtgtgtaagagttcaagtatgctttaatacacaccctgaacatgctacc
catctacaggacagccctgtctccaagcaataacaggatgttaaagatgg
aaaactgtaggcataattttttatcaacctactttaataaaggttcaaca
tctcctctagcccaccagtcaccagaggtagtggaaaagaaaagttatta
ggacttgggggaagtacacctgtttaagaatcattcttttggatcaggtc
ctatcttcattgtcaggatatcaacattccagtcctctagggaaacacta
acatgaatcagcagtggcagtcctgtccattcagcaatcacactcgtgaa
ttagcagctacagaccgggtcactcagcagactctacacaggaatcggca
agggcattcatccagaagaaactgcagctcaccaacctgcctaagtctga
tggggcagagcagcaggaacctcggggagaacattctttggcaagccttc
actttataacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46720836_46721358
seq2: B6Ng01-203N10.b_46_568 (reverse)

seq1  GAGATTGGGGAACCCTGAGGACGAAAAGGAGGAAAGACTATAGTAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGGGGAACCCTGAGGACGAAAAGGAGGAAAGACTATAGTAGTCAT  50

seq1  GGTGGGTGGAGGGTACCAAGGGAACATGGTCCACAAAATAAATTAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGGAGGGTACCAAGGGAACATGGTCCACAAAATAAATTAATCAA  100

seq1  GGCTTATATGGGCTCACAGAGACTGAAGCAGAAGTCATGGGGTTGCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATATGGGCTCACAGAGACTGAAGCAGAAGTCATGGGGTTGCAAGG  150

seq1  GTGTGTACCAAGTCCTCTGCATATGTGCTAAGCTGTTAGTTTGATGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACCAAGTCCTCTGCATATGTGCTAAGCTGTTAGTTTGATGTTTC  200

seq1  TGTGGGACTCCTAACAGTGGAAGAGGGTGCATTTCTAACTCATTTGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACTCCTAACAGTGGAAGAGGGTGCATTTCTAACTCATTTGCCTG  250

seq1  TTCTTGGGACTCTTTTTTCTTCTTTTGTGTTGTCTTGTCCATCTTCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGACTCTTTTTTCTTCTTTTGTGTTGTCTTGTCCATCTTCCATA  300

seq1  TGAGGGTTTTTGCCTTGTCTTACTGTGTCTTGTTTTGTCCTGTTTGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTTTTGCCTTGTCTTACTGTGTCTTGTTTTGTCCTGTTTGGCTA  350

seq1  TTATATCTTAGAGGCCTCCTGTTTACTGAAGAGGAAATGGAGTAGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTTAGAGGCCTCCTGTTTACTGAAGAGGAAATGGAGTAGAAGTG  400

seq1  GATCTTTGGGAGAGGGGAAGCAAGGGGGAAGCTGAAGGAAGTGGAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGGGAGAGGGGAAGCAAGGGGGAAGCTGAAGGAAGTGGAGGGAG  450

seq1  GGGAAACAGTGGTCTGTATGAGAAGACACTGTGTTTTAAAAAAAAGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAGTGGTCTGTATGAGAAGACACTGTGTTTTAAAAAAAAGTATA  500

seq1  ACAGAATACGAATTAAAGAATTC  523
      |||||||||||||||||||||||
seq2  ACAGAATACGAATTAAAGAATTC  523


seq1: chr2_46563273_46564390
seq2: B6Ng01-203N10.g_66_1178

seq1  GAATTCAAGAAAAAATAGTGGATTAGGAATCTAATAAAACCTGATAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAAAATAGTGGATTAGGAATCTAATAAAACCTGATAGCTT  50

seq1  TTGATTTTTTGTTTTAGTTAATGTTATTTACTGTAAATATTCTGCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTTGTTTTAGTTAATGTTATTTACTGTAAATATTCTGCTCAAA  100

seq1  ACAGTTGCATATTTGATGTTCTTTGTGCTTTTAAAATTAATTTCTGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCATATTTGATGTTCTTTGTGCTTTTAAAATTAATTTCTGATAA  150

seq1  CAACCAGTGTCCTGTGTAAGGCCATATATGATGAAATATTAATATTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGTGTCCTGTGTAAGGCCATATATGATGAAATATTAATATTAGCT  200

seq1  CTGTTATATAATTTATTTTAAAACCAATCTGATTCTTTTGATGTTGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATATAATTTATTTTAAAACCAATCTGATTCTTTTGATGTTGATGA  250

seq1  TGTTGCCATTTACATTGATAATGTTCACAATAGTAATTGTTGTATATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCATTTACATTGATAATGTTCACAATAGTAATTGTTGTATATTTC  300

seq1  TTTGCACAACTCTGACTAATTCTTTACTGACACATCAGCCATTTAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACAACTCTGACTAATTCTTTACTGACACATCAGCCATTTAAAACA  350

seq1  AAAGTTGACATGGCCAGAGTCAGAGTGATCTTGTGGCTAGGCAGAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGACATGGCCAGAGTCAGAGTGATCTTGTGGCTAGGCAGAATGTT  400

seq1  CAGGAGCAGGATCCACAAAAGCTTCAGGATACTGCACAACTCCTTCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAGGATCCACAAAAGCTTCAGGATACTGCACAACTCCTTCCTCT  450

seq1  CAATGCTGGCTTTCAGATCACCAGGCATGAGTGTTGGGAAAGATAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTGGCTTTCAGATCACCAGGCATGAGTGTTGGGAAAGATAGACAG  500

seq1  AGAGCGGTAGTGGACAGAGGTAGAACTAGATATATGCCAAGTATGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGGTAGTGGACAGAGGTAGAACTAGATATATGCCAAGTATGAGAAA  550

seq1  ATGTTTCAATAGACAAGGATCATATCGTTACTGAGTGGGGCCAGCAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAATAGACAAGGATCATATCGTTACTGAGTGGGGCCAGCAGAGC  600

seq1  AGTGTGTAAGAGTTCAAGTATGCTTTAATACACACCCTGAACATGCTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTAAGAGTTCAAGTATGCTTTAATACACACCCTGAACATGCTACC  650

seq1  CATCTACAGGACAGCCCTGTCTCCAAGCAATAACAGGATGTTAAAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAGGACAGCCCTGTCTCCAAGCAATAACAGGATGTTAAAGATGG  700

seq1  AAAACTGTAGGCATAATTTTTTATCAACCTACTTTAATAAAGGTTCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTAGGCATAATTTTTTATCAACCTACTTTAATAAAGGTTCAACA  750

seq1  TCTCCTCTAGCCCACCAGTCACCAGAGGTAGTGGAAAAGAAAAGTTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTAGCCCACCAGTCACCAGAGGTAGTGGAAAAGAAAAGTTATTA  800

seq1  GGACTTGGGGGAAGTACACCTGTTTAAGAATCATTCTTTTGGATCAGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGGGGAAGTACACCTGTTTAAGAATCATTCTTTTGGATCAGGTC  850

seq1  CTATCTTCATTGTCAGGATATCAACATTCCAGTCCTCTAGGGAAACACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTCATTGTCAGGATATCAACATTCCAGTCCTCTAGGGAAACACTA  900

seq1  ACATGAATCAGCAGTGGCAGTCCTGTCCATTCAGCAATCACCACTCGTGA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACATGAATCAGCAGTGGCAGTCCTGTCCATTCAGCAATCA-CACTCGTGA  949

seq1  ATTAGCAGCTACAGACCGGTCAACTCAGCAGACTCTACACAGGAATCGGC  1000
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  ATTAGCAGCTACAGACCGGGTCACTCAGCAGACTCTACACAGGAATCGGC  999

seq1  AAGGGCAATTCAATCCAGAAGAAACTGCAAGGCTCACCAACCTGCCTAAG  1050
      |||||| |||| |||||||||||||||||  |||||||||||||||||||
seq2  AAGGGC-ATTC-ATCCAGAAGAAACTGCA--GCTCACCAACCTGCCTAAG  1045

seq1  TCTGGATGGGGCAAGAAGCAGCAGGAACCTC-GGGAG-ACATTCTTTGGC  1098
      ||| |||||||||   ||||||||||||||| ||||| ||||||||||||
seq2  TCT-GATGGGGCA--GAGCAGCAGGAACCTCGGGGAGAACATTCTTTGGC  1092

seq1  AAG-CTTCACTTTATAACGTC  1118
      ||| |||||||||||||||||
seq2  AAGCCTTCACTTTATAACGTC  1113


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