BAC Information

Click to search

BAC

Clone NameB6Ng01-204A02
Chromosome2 (Build37)
Map Location 11,085,632 - 11,086,439
singlet/doubletsinglet
Overlap genenone
Upstream geneItih5, Sfmbt2, LOC100040690, LOC100040703, LOC667192
Downstream genePrkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17, Il2ra, Il15ra, Fbxo18, Ankrd16, EG635919, LOC667247, Itga8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204A02.bB6Ng01-204A02.g
ACCGA024068GA024069
length469810
definitionB6Ng01-204A02.b B6Ng01-204A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgtttttcactctgctgacaccatgtgcttctggctttccttgaataatc
ctctttggttgtttccttccttccttccttccttccttccttccttcctt
ccttccttccttccttccttccttctgtgtacacacacacatgtgcatgt
ggggacatctggtattgttccataggttctgtctatctttaattctttga
ggcagggtctcccactagcttcaactctccagacagtctaggctgattgg
ccagtgagtctcagggattcatctctctctgctgggattacgtgtgcacc
ccaccacacccagctggaaattatttgttatgtgtgtggatgtcttatcg
gcacgtgtccgtgcacccctgggtgttgtgtgctcttagaggacagaaga
gggaccatgacctgaagcggattctagacagttgttggctgccatgtggc
tgctaggaaccaaacctgg
gaattcaccaattcacccaccttgattttgaactccgagcaaatgactcc
acataggatgtgtccttttcaaccttgcctggcattgtatttgcaagctt
ttgatttttggaatttcatgccacagttcttcatcaatggtcactgctac
agtttcagttgattggcacagcacaattttgtgatgcacttgccttgctt
gcggggggcggggaattccaaggagtgctatagggagcatgccacacatg
ccttgccctacatatgagcacacttctatgccctgtgtacccacatgtcc
aggacactggctactcatatgctttgcattagtggctattgtgaaaatgt
ttttggaagtgtaattagcgtcagaattccactttctccacacccatcac
atagtgtgcacaatacacccactgtgtccaggggtttacaaagtagagca
tgaaatttctggaattttctctcatagcagagaaatacatgggataattt
aagtgtagaagcatggaagagacctgcattctctccacactcaatggtga
ggaagaaaataaaatatgtgttcctgcaaaacagaatgatggcagagaag
attggagaaacaaatatgttaacaataatttccttaaaaattatttttaa
tgtattgccactctatcgagcaggcaaagccccagaaactctgggctggc
ttcagttcatttgtacaagtttattagttgggtttgtttttagctcagtt
ttgcttcagtcctctctctctctctctctctctctgtctctctctctctc
tgtctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_11085632_11086439
seq2: B6Ng01-204A02.g_66_875

seq1  GAATTCACCAATTCACCCACCTTGATTTTGAACTCCGAGCAAATGACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAATTCACCCACCTTGATTTTGAACTCCGAGCAAATGACTCC  50

seq1  ACATAGGATGTGTCCTTTTCAACCTTGCCTGGCATTGTATTTGCAAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGATGTGTCCTTTTCAACCTTGCCTGGCATTGTATTTGCAAGCTT  100

seq1  TTGATTTTTGGAATTTCATGCCACAGTTCTTCATCAATGGTCACTGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTGGAATTTCATGCCACAGTTCTTCATCAATGGTCACTGCTAC  150

seq1  AGTTTCAGTTGATTGGCACAGCACAATTTTGTGATGCACTTGCCTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGTTGATTGGCACAGCACAATTTTGTGATGCACTTGCCTTGCTT  200

seq1  GCGGGGGGCGGGGAATTCCAAGGAGTGCTATAGGGAGCATGCCACACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGGCGGGGAATTCCAAGGAGTGCTATAGGGAGCATGCCACACATG  250

seq1  CCTTGCCCTACATATGAGCACACTTCTATGCCCTGTGTACCCACATGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCCTACATATGAGCACACTTCTATGCCCTGTGTACCCACATGTCC  300

seq1  AGGACACTGGCTACTCATATGCTTTGCATTAGTGGCTATTGTGAAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACTGGCTACTCATATGCTTTGCATTAGTGGCTATTGTGAAAATGT  350

seq1  TTTTGGAAGTGTAATTAGCGTCAGAATTCCACTTTCTCCACACCCATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAGTGTAATTAGCGTCAGAATTCCACTTTCTCCACACCCATCAC  400

seq1  ATAGTGTGCACAATACACCCACTGTGTCCAGGGGTTTACAAAGTAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGCACAATACACCCACTGTGTCCAGGGGTTTACAAAGTAGAGCA  450

seq1  TGAAATTTCTGGAATTTTCTCTCATAGCAGAGAAATACATGGGATAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTCTGGAATTTTCTCTCATAGCAGAGAAATACATGGGATAATTT  500

seq1  AAGTGTAGAAGCATGGAAGAGACCTGCATTCTCTCCACACTCAATGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAGAAGCATGGAAGAGACCTGCATTCTCTCCACACTCAATGGTGA  550

seq1  GGAAGAAAATAAAATATGTGTTCCTGCAAAACAGAATGATGGCAGAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAATAAAATATGTGTTCCTGCAAAACAGAATGATGGCAGAGAAG  600

seq1  ATTGGAGAAACAAATATGTTAACAATAATTTCCTTAAAAATTA-TTTTAA  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTGGAGAAACAAATATGTTAACAATAATTTCCTTAAAAATTATTTTTAA  650

seq1  TGTATTGCCACTCTATCGAGCAGGCAAAGCCCCAGAAACTCTGGGCTGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGCCACTCTATCGAGCAGGCAAAGCCCCAGAAACTCTGGGCTGGC  700

seq1  TTCAGTTCA-TTGTACAAGTTTATTAGTT-GGTTTGTTTTTAGCTCAGGT  747
      ||||||||| ||||||||||||||||||| ||||||||||||||||| ||
seq2  TTCAGTTCATTTGTACAAGTTTATTAGTTGGGTTTGTTTTTAGCTCA-GT  749

seq1  TTTGCTTCAGTCCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCAGTCCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCT  799

seq1  CTGTCTCTCTC  808
      |||||||||||
seq2  CTGTCTCTCTC  810