BAC Information

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BAC

Clone NameB6Ng01-204E10
Chromosome2 (Build37)
Map Location 112,293,799 - 112,455,546
singlet/doubletdoublet
Overlap gene2900064A13Rik, Chrm5, Aven
Upstream geneOlfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik
Downstream geneRyr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204E10.bB6Ng01-204E10.g
ACCGA024262GA024263
length1,1621,118
definitionB6Ng01-204E10.b B6Ng01-204E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,293,799 - 112,294,936)(112,454,455 - 112,455,546)
sequence
gaattcacaacatactggttttatttatataataagcactatttatataa
tagtgtgtgtcaaataaatatacattatgttgcatattatatttatttaa
tatcaagtatatggatgttgctcacatgtatgtatgtatgtgaactagcc
tgtggaggtatcagatcacctggaatttgaagagctatagtgtgggggct
ggggactgaactcaggtcttctgcaagagtaacaagtggtcttaacagcc
gactcatctctctacccccatatatgtatatttttaattttatgtttttg
cttatagactatttctgggcacagagtcaagggatggagatagagaccac
tagaaacatgcataaagttaggtgtattaatttctgtagcaagaaaaact
ctataccagagaaactgaatagaagagaattagtagaagagtattagtag
aagagaagatggatgaatttttacagtatttaggcctctgctcaatgact
gagttatctaaggcaggtaagcatcaactctgaaaagaatatgttagcca
acgaaacagtgagaaacgaagcagggttgcggcactcttggtaaataaga
attaagaactggaagaaggatgctagacgcggcatggctttacgaaggta
actgttttctggtggtctggccatttgccctgtctgtgtcttaggtattt
tatttaccatttatagtgagtgcttcactttctcagtctgcaaccttgtt
tgtttaaaaaaccaaagcattaacacagaatgaaaataaacattctccgc
gaacttaaacatggatcaccatttttttgatatagattttaaaaaacttt
ttgttttccttttcagcccaaattgtctgcatttccactctccatcggga
gcttcactctttttttttttttttttaacttttctattggaggcagagtg
cacagggtcttttatcggagatatgttgggtagaaagagactattttaga
gctctagccaagaacccttgagaaagtgataagggtccgatggtctgaat
gtttgttagcttacagacaccagcactccaacaacttccgattctctcat
tcctctccggtctcattgatcccttaccgcccacgtataggacctgcaaa
ctgtgacgccac
gaattctgtttgcagtcagaactttctgagactgaggacttcagatgaga
acaagtaggatggagtaaaagatggcagaggtcttcagttgaagttgctc
ttaaatggctctcaaaaataattagaaactaaagatatcctaagtcatat
ttagtgatgactactgaagtcagtaccaccgatctgtaagatagcaagca
atggaccagttgttaaagggagttataacgagtcctaagataccaaaaag
aagtggctttaaatatattctatttgttcataataaacaagtttaagaaa
ttcctcctagaaaaattttaatatataggaagagatttatacaaacagca
gccttgcttacattagaaggcagaatgtccctcaggcctgtctgcttttt
gaagtgctgtttgcagtgcataatgatcccatttaaattctttcttaaag
ttcttgtttgttctttttgtatctcatatttcctgatcgagagctggggt
caccactgtgaggagcaacacaccctgaatagagatggggcggggctgtg
ggaatggccacagccagctgcctgtgtgcccaccttgctagagggctcac
ctcatgagctctgcctcaatccaatgtgccacgaaccaacattaactggg
agggtacccaaatgcgagatccttctcaaggctcctcaggaaaggaatgg
gaaggaaagcacacaggtgccaagggctcttcagcaggcctcaagcagct
ccaagaatggaggctggggagcagctgtggcgccttgaacatggcggcag
cactactggcaaccgacactgaagcctagcgaaagcttaatgagcaacaa
gcacatggccagatggtcaggctttcctacaagccaagcagagaaaagct
gcagatccttgttccatgggacacaaggacgctacagattcttcctttat
aaatgaatgtttcaagaattcaccaaaacccagcctcaagctaaaaacta
gcactgtaattttggacattatattctccccaaaactgggagtcacctgg
tgtccaagaataaaaaaataattccgggatgtatttttttggtattgata
attgtatttaacagtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112293799_112294936
seq2: B6Ng01-204E10.b_43_1204

seq1  GAATTCACAACATACTGGTTTTATTTATATAATAAGCACTATTTATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAACATACTGGTTTTATTTATATAATAAGCACTATTTATATAA  50

seq1  TAGTGTGTGTCAAATAAATATACATTATGTTGCATATTATATTTATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTGTCAAATAAATATACATTATGTTGCATATTATATTTATTTAA  100

seq1  TATCAAGTATATGGATGTTGCTCACATGTATGTATGTATGTGAACTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTATATGGATGTTGCTCACATGTATGTATGTATGTGAACTAGCC  150

seq1  TGTGGAGGTATCAGATCACCTGGAATTTGAAGAGCTATAGTGTGGGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGTATCAGATCACCTGGAATTTGAAGAGCTATAGTGTGGGGGCT  200

seq1  GGGGACTGAACTCAGGTCTTCTGCAAGAGTAACAAGTGGTCTTAACAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTGAACTCAGGTCTTCTGCAAGAGTAACAAGTGGTCTTAACAGCC  250

seq1  GACTCATCTCTCTACCCCCATATATGTATATTTTTAATTTTATGTTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATCTCTCTACCCCCATATATGTATATTTTTAATTTTATGTTTTTG  300

seq1  CTTATAGACTATTTCTGGGCACAGAGTCAAGGGATGGAGATAGAGACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGACTATTTCTGGGCACAGAGTCAAGGGATGGAGATAGAGACCAC  350

seq1  TAGAAACATGCATAAAGTTAGGTGTATTAATTTCTGTAGCAAGAAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACATGCATAAAGTTAGGTGTATTAATTTCTGTAGCAAGAAAAACT  400

seq1  CTATACCAGAGAAACTGAATAGAAGAGAATTAGTAGAAGAGTATTAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCAGAGAAACTGAATAGAAGAGAATTAGTAGAAGAGTATTAGTAG  450

seq1  AAGAGAAGATGGATGAATTTTTACAGTATTTAGGCCTCTGCTCAATGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGATGGATGAATTTTTACAGTATTTAGGCCTCTGCTCAATGACT  500

seq1  GAGTTATCTAAGGCAGGTAAGCATCAACTCTGAAAAGAATATGTTAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATCTAAGGCAGGTAAGCATCAACTCTGAAAAGAATATGTTAGCCA  550

seq1  ACGAAACAGTGAGAAACGAAGCAGGGTTGCGGCACTCTTGGTAAATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAACAGTGAGAAACGAAGCAGGGTTGCGGCACTCTTGGTAAATAAGA  600

seq1  ATTAAGAACTGGAAGAAGGATGCTAGACGCGGCATGGCTTTACGAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAACTGGAAGAAGGATGCTAGACGCGGCATGGCTTTACGAAGGTA  650

seq1  ACTGTTTTCTGGTGGTCTGGCCATTTGCCCTGTCTGTGTCTTAGGTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTCTGGTGGTCTGGCCATTTGCCCTGTCTGTGTCTTAGGTATTT  700

seq1  TATTTACCATTTATAGTGAGTGCTTCACTTTCTCAGTCTGCAACCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCATTTATAGTGAGTGCTTCACTTTCTCAGTCTGCAACCTTGTT  750

seq1  TG-TTAAAAAACCAAAGCATTAACACAGAATGAAAATAAACATTCTCCGC  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAAACCAAAGCATTAACACAGAATGAAAATAAACATTCTCCGC  800

seq1  GAACTTAAACATGGATCACCA-TTTTTTGATATAGATTTTAAAAAACTTT  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAACTTAAACATGGATCACCATTTTTTTGATATAGATTTTAAAAAACTTT  850

seq1  TTGTTTTCCTTTTCAGCCCAAATTGTCTGCATTTCCACTCTCCATCGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCCTTTTCAGCCCAAATTGTCTGCATTTCCACTCTCCATCGGGA  900

seq1  GCTTCACTCTTTTTTTTTTTTTTTTTAACTTTTCTA-TGGAGGCAGAGTG  947
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCTTCACTCTTTTTTTTTTTTTTTTTAACTTTTCTATTGGAGGCAGAGTG  950

seq1  CACAGGGTCTTTTA-CGGAGATATGT--GGTAGAAAGGAGACTA-TTTAG  993
      |||||||||||||| |||||||||||  |||||||| ||||||| |||||
seq2  CACAGGGTCTTTTATCGGAGATATGTTGGGTAGAAA-GAGACTATTTTAG  999

seq1  AG--CTAG-CAAGAA-CCTTGAGAAAGTGAT-AGGGT-CGAT-GTCTGAA  1036
      ||  |||| |||||| ||||||||||||||| ||||| |||| |||||||
seq2  AGCTCTAGCCAAGAACCCTTGAGAAAGTGATAAGGGTCCGATGGTCTGAA  1049

seq1  TG-TTGTTAGC-TACAGACA-CAGCACT-CAAC-ACTTCAGAT--CCTCA  1079
      || |||||||| |||||||| ||||||| |||| ||||| |||   ||||
seq2  TGTTTGTTAGCTTACAGACACCAGCACTCCAACAACTTCCGATTCTCTCA  1099

seq1  TTCCTCT-CGGTCTCA-TGGTCCTTTA-CGCCCACG-ATAAGACCTGC-A  1124
      ||||||| |||||||| || ||| ||| |||||||| ||| ||||||| |
seq2  TTCCTCTCCGGTCTCATTGATCCCTTACCGCCCACGTATAGGACCTGCAA  1149

seq1  ACTGTGGACGCCAC  1138
      ||||| ||||||||
seq2  ACTGT-GACGCCAC  1162

seq1: chr2_112454455_112455546
seq2: B6Ng01-204E10.g_69_1186 (reverse)

seq1  TAGACTGTAAAATACAATAA--CATAC---AAAAATACATCCAGGATATA  45
      |||||||| ||||||||| |   ||||   |||||||||||| |||  ||
seq2  TAGACTGTTAAATACAATTATCAATACCAAAAAAATACATCCCGGAATTA  50

seq1  ---TTTTATTCTTGGGCAC--AGTGACT-CCAGTTT--GGGAGAATAT-A  86
         |||||||||||| |||   |||||| |||||||  |||||||||| |
seq2  TTTTTTTATTCTTGGACACCAGGTGACTCCCAGTTTTGGGGAGAATATAA  100

seq1  TGT-CAAAAATACAGTGCTAG-TTTTAGCTTGAGGCTGG---TTTGTGAA  131
      ||| ||||| ||||||||||| |||||||||||||||||   || |||||
seq2  TGTCCAAAATTACAGTGCTAGTTTTTAGCTTGAGGCTGGGTTTTGGTGAA  150

seq1  -TCTTG-AACA-TCATTTAT-AAGGAAGAATCTGTAGCGTCCTTGTGTCC  177
       ||||| |||| |||||||| |||||||||||||||||||||||||||||
seq2  TTCTTGAAACATTCATTTATAAAGGAAGAATCTGTAGCGTCCTTGTGTCC  200

seq1  CATGG-ACAAGGATCTGCAGC-TTTCTCTGCTTGGCTTGTAGG-AAGCCT  224
      ||||| ||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CATGGAACAAGGATCTGCAGCTTTTCTCTGCTTGGCTTGTAGGAAAGCCT  250

seq1  GACCATCTGGCCATGTGCTGTTTGCTCATTAAGCCTTCGCTAGGCTTCAG  274
      |||||||||||||||||||  ||||||||||||| |||||||||||||||
seq2  GACCATCTGGCCATGTGCTTGTTGCTCATTAAGCTTTCGCTAGGCTTCAG  300

seq1  TGTCGGTTGCCAGTAGTGCTGCCGCCATGTTCAAGGCGCCACAGCTGCTC  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGTTGCCAGTAGTGCTGCCGCCATGTTCAAGGCGCCACAGCTGCTC  350

seq1  CCCAGCCTCCATTCTTGGAGCTGCTTGAGGCCTGCTGAAGAGCCCTTGGC  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTCCATTCTTGGAGCTGCTTGAGGCCTGCTGAAGAGCCCTTGGC  400

seq1  ACCTGTGTGCTTTCCTTCCCATTCCTTTCCTGAGGAGCCTTGAGAAGGAT  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTGCTTTCCTTCCCATTCCTTTCCTGAGGAGCCTTGAGAAGGAT  450

seq1  CTCGCATTTGGGTACCCTCCCAGTTAATGTTGGTTCGTGGCACATTGGAT  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCATTTGGGTACCCTCCCAGTTAATGTTGGTTCGTGGCACATTGGAT  500

seq1  TGAGGCAGAGCTCATGAGGTGAGCCCTCTAGCAAGGTGGGCACACAGGCA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGAGCTCATGAGGTGAGCCCTCTAGCAAGGTGGGCACACAGGCA  550

seq1  GCTGGCTGTGGCCATTCCCACAGCCCCGCCCCATCTCTATTCAGGGTGTG  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGTGGCCATTCCCACAGCCCCGCCCCATCTCTATTCAGGGTGTG  600

seq1  TTGCTCCTCACAGTGGTGACCCCAGCTCTCGATCAGGAAATATGAGATAC  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCTCACAGTGGTGACCCCAGCTCTCGATCAGGAAATATGAGATAC  650

seq1  AAAAAGAACAAACAAGAACTTTAAGAAAGAATTTAAATGGGATCATTATG  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAACAAACAAGAACTTTAAGAAAGAATTTAAATGGGATCATTATG  700

seq1  CACTGCAAACAGCACTTCAAAAAGCAGACAGGCCTGAGGGACATTCTGCC  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAAACAGCACTTCAAAAAGCAGACAGGCCTGAGGGACATTCTGCC  750

seq1  TTCTAATGTAAGCAAGGCTGCTGTTTGTATAAATCTCTTCCTATATATTA  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGTAAGCAAGGCTGCTGTTTGTATAAATCTCTTCCTATATATTA  800

seq1  AAATTTTTCTAGGAGGAATTTCTTAAACTTGTTTATTATGAACAAATAGA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTCTAGGAGGAATTTCTTAAACTTGTTTATTATGAACAAATAGA  850

seq1  ATATATTTAAAGCCACTTCTTTTTGGTATCTTAGGACTCGTTATAACTCC  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTAAAGCCACTTCTTTTTGGTATCTTAGGACTCGTTATAACTCC  900

seq1  CTTTAACAACTGGTCCATTGCTTGCTATCTTACAGATCGGTGGTACTGAC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACAACTGGTCCATTGCTTGCTATCTTACAGATCGGTGGTACTGAC  950

seq1  TTCAGTAGTCATCACTAAATATGACTTAGGATATCTTTAGTTTCTAATTA  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAGTCATCACTAAATATGACTTAGGATATCTTTAGTTTCTAATTA  1000

seq1  TTTTTGAGAGCCATTTAAGAGCAACTTCAACTGAAGACCTCTGCCATCTT  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGAGCCATTTAAGAGCAACTTCAACTGAAGACCTCTGCCATCTT  1050

seq1  TTACTCCATCCTACTTGTTCTCATCTGAAGTCCTCAGTCTCAGAAAGTTC  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCATCCTACTTGTTCTCATCTGAAGTCCTCAGTCTCAGAAAGTTC  1100

seq1  TGACTGCAAACAGAATTC  1092
      ||||||||||||||||||
seq2  TGACTGCAAACAGAATTC  1118