BAC Information

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BAC

Clone NameB6Ng01-204G21
Chromosome2 (Build37)
Map Location 149,402,060 - 149,403,219
singlet/doubletsinglet
Overlap genenone
Upstream geneNxt1, Gzf1, Napb, Cstl1, Cst11, 8030411F24Rik, Cst12, Cst8, Cst13, Cst9, 9230104L09Rik, Cst3, OTTMUSG00000015744, Gm1330, EG668921, LOC433483, LOC383754, LOC100043593, LOC241715, Cst10
Downstream geneEG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204G21.bB6Ng01-204G21.g
ACCGA024380GA024381
length1,1401,162
definitionB6Ng01-204G21.b B6Ng01-204G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctgggagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatgtatatattggatatcagcc
cgctatctgatttaggataggtaaagatcctttcacaatctgttggtggc
ctttttgtcttattgatagtgtcttttgccttgcagaagctttgcaattt
tatcaggtcccatttgtctattctcgatcttacagcacaagccattgctg
ttctattcaggaatttttcccctgtacccatatcttcaaggcttttccct
actttcttctctataagtttcagtgcctctggttttatgtggagttcctt
aatccacttattattgaccttagtacaaggagttaggaaaggatcaattc
gcattcttctacatgataaccaccagttgtgccagcaccatatgttgaaa
atgctgtcttttttccactgggtgatttttgctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctgtcgctataccagtaccatgcagtttttatcacaattgctctgta
gtacagctttaggtcaggcatggtgattccaccagaggttcttttatcct
tgaaaagagtttttgctatcctaggttttttgttattccagatgaatttg
tagattgccctttctaattcgttgaagaattgagttggaattttgatggg
gattgcattgaatctgtagatcgtttttgacaagatagccaattttacta
tattgatcctgccaatccatgagcatgggagatctttccatttttctgag
atctttcttctttaatttctttcttcagagacatgaagttcttatcaata
cagatctttcacttccttagttagattcacgccaaggtattttatactat
ttgtgactattgagaagggtgttgtttccctaatttcttctcatcttgtt
taattcttttgttgtaaaagaaaggcccatttgacttgtttgggttaact
tttatatccagcttaccttcaccaaaggcctggttaagcacgggtttagg
gaacgtctctgggtggagactttttagaggttccttacat
gaattcaaggtgtatatactgcttcaaacttcatggatcacataatatga
attatggtttgaggctgaagtgttcttcccaggatcatgggtttagtgct
tagactcttacatttggaactattttggggggtgctagaaaatttaggaa
ggtaggacttacctgtaggaagtaagttcttgggattctgttgtatttct
ttctccctgtttcactatgaagcaaacagcctccttccttatatgttaca
actgtcaacttttcacttctttgtagctctgatgaaatatcataatgaaa
cttaatttatgaaaggaagagtttattttggcatttagttccaggatgtc
agaatacacaacggcagggtaagaataggcagcaagtgacaagagaagga
aattaaaagaacaagggctgcaagaggggtgaatccataaacccactctg
actgcccctagtgatatacttcctccagcaaggcttcatgtctttgaggt
tctatgactccccaaacagtacctctaactgggggaccagttgttccaat
gaatgaatctatgtggagcatttattattaaaataacaatatactgccac
tttgttctggccagctccatttagacaagcaactgatgtcatcatttaat
gttataggaatggattcttctactctgttgatatgaagaagaaaaagaca
gaataagtaaggtcttatcactcccttagctaagttttattgaaaataga
agcaagcatatgtacacacacacacacacacacacacacacacagacaga
cagacacacacatggggttggggagaagcatacaaacaagtagatttttc
ctttaggagttaacacaagatgctgtctgaggtctcctggtagagttaaa
ttcttttcatattgttttgagggccagatgggttctcttttcccttagca
ttgggtgatttggactattttggaggattagataccttggcaaattaaaa
gaactgattggtcttgctgcagaaaccatccccagaactccctttcttga
tgcaatttgagagttcactggattgcttaaatttattgaacatgtaaagg
ccaacagtctttgtcatagtaagtagagaatcagtatcttaatctacctt
agaattctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149402060_149403219
seq2: B6Ng01-204G21.g_64_1225 (reverse)

seq1  AGGGAGAA-TCT-AGGTAGATTAAGATAACTGAATTCCTCCTCCTCTACT  48
      |||||||| ||| |||||||||||||| ||||| |  || ||    ||||
seq2  AGGGAGAATTCTAAGGTAGATTAAGAT-ACTGATTCTCTACT----TACT  45

seq1  ATGACAAAGACTTGGTGGGCTTTTCCTGT--CATAA--TTAA-CCATTCA  93
      ||||||||||| || ||| |||| | |||   ||||  |||| | || ||
seq2  ATGACAAAGAC-TGTTGGCCTTTACATGTTCAATAAATTTAAGCAATCCA  94

seq1  GTGAACTTCTCAAACCTTGCATCAAG-AAGGGAGTTCTGGGGAAGGTTTC  142
      |||||| |||||||  |||||||||| |||||||||||||||| ||||||
seq2  GTGAAC-TCTCAAA--TTGCATCAAGAAAGGGAGTTCTGGGGATGGTTTC  141

seq1  TGCAGCAAGAACCAACCAGTTTCTTTTTATTTGCCAAGGTTATCTAATCC  192
      ||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||
seq2  TGCAGCAAG-ACCAATCAG-TTCTTTTAATTTGCCAAGG-TATCTAATCC  188

seq1  TCCAAAATAGTCCAAATCACCCAATGCTAA-GGAAAAGAGAACCCATCTG  241
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCAAAATAGTCCAAATCACCCAATGCTAAGGGAAAAGAGAACCCATCTG  238

seq1  GCCCTCAAA--CATATGAAA--GATTTAACTCTACCAGGAGACCTCAGAC  287
      |||||||||   ||||||||   |||||||||||||||||||||||||||
seq2  GCCCTCAAAACAATATGAAAAGAATTTAACTCTACCAGGAGACCTCAGAC  288

seq1  AGCATCTTGTGTTAACTCCTAAAGG-AAAATCTACTTGTTTGTATGCTTC  336
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCATCTTGTGTTAACTCCTAAAGGAAAAATCTACTTGTTTGTATGCTTC  338

seq1  TCCCCAACCCCATGTGTGTGTCTGTCTGTCTGTGTGTGTGTGTGTGTGTG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACCCCATGTGTGTGTCTGTCTGTCTGTGTGTGTGTGTGTGTGTG  388

seq1  TGTGTGTGTGTACATATGCTTGCTTCTATTTTCAATAAAACTTAGCTAAG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTACATATGCTTGCTTCTATTTTCAATAAAACTTAGCTAAG  438

seq1  GGAGTGATAAGACCTTACTTATTCTGTCTTTTTCTTCTTCATATCAACAG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATAAGACCTTACTTATTCTGTCTTTTTCTTCTTCATATCAACAG  488

seq1  AGTAGAAGAATCCATTCCTATAACATTAAATGATGACATCAGTTGCTTGT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGAATCCATTCCTATAACATTAAATGATGACATCAGTTGCTTGT  538

seq1  CTAAATGGAGCTGGCCAGAACAAAGTGGCAGTATATTGTTATTTTAATAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGGAGCTGGCCAGAACAAAGTGGCAGTATATTGTTATTTTAATAA  588

seq1  TAAATGCTCCACATAGATTCATTCATTGGAACAACTGGTCCCCCAGTTAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTCCACATAGATTCATTCATTGGAACAACTGGTCCCCCAGTTAG  638

seq1  AGGTACTGTTTGGGGAGTCATAGAACCTCAAAGACATGAAGCCTTGCTGG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGTTTGGGGAGTCATAGAACCTCAAAGACATGAAGCCTTGCTGG  688

seq1  AGGAAGTATATCACTAGGGGCAGTCAGAGTGGGTTTATGGATTCACCCCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTATATCACTAGGGGCAGTCAGAGTGGGTTTATGGATTCACCCCT  738

seq1  CTTGCAGCCCTTGTTCTTTTAATTTCCTTCTCTTGTCACTTGCTGCCTAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGCCCTTGTTCTTTTAATTTCCTTCTCTTGTCACTTGCTGCCTAT  788

seq1  TCTTACCCTGCCGTTGTGTATTCTGACATCCTGGAACTAAATGCCAAAAT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCCTGCCGTTGTGTATTCTGACATCCTGGAACTAAATGCCAAAAT  838

seq1  AAACTCTTCCTTTCATAAATTAAGTTTCATTATGATATTTCATCAGAGCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCCTTTCATAAATTAAGTTTCATTATGATATTTCATCAGAGCT  888

seq1  ACAAAGAAGTGAAAAGTTGACAGTTGTAACATATAAGGAAGGAGGCTGTT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAGTGAAAAGTTGACAGTTGTAACATATAAGGAAGGAGGCTGTT  938

seq1  TGCTTCATAGTGAAACAGGGAGAAAGAAATACAACAGAATCCCAAGAACT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATAGTGAAACAGGGAGAAAGAAATACAACAGAATCCCAAGAACT  988

seq1  TACTTCCTACAGGTAAGTCCTACCTTCCTAAATTTTCTAGCACCCCCCAA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTACAGGTAAGTCCTACCTTCCTAAATTTTCTAGCACCCCCCAA  1038

seq1  AATAGTTCCAAATGTAAGAGTCTAAGCACTAAACCCATGATCCTGGGAAG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTCCAAATGTAAGAGTCTAAGCACTAAACCCATGATCCTGGGAAG  1088

seq1  AACACTTCAGCCTCAAACCATAATTCATATTATGTGATCCATGAAGTTTG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCAGCCTCAAACCATAATTCATATTATGTGATCCATGAAGTTTG  1138

seq1  AAGCAGTATATACACCTTGAATTC  1160
      ||||||||||||||||||||||||
seq2  AAGCAGTATATACACCTTGAATTC  1162