BAC Information

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BAC

Clone NameB6Ng01-205K20
Chromosome2 (Build37)
Map Location 167,215,188 - 167,216,291
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps2_2197.1, BC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5
Downstream geneSlc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205K20.bB6Ng01-205K20.g
ACCGA025295GA025296
length1,2491,090
definitionB6Ng01-205K20.b B6Ng01-205K20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggcttagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcagcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttcttttttttt
tctttccattttttattaggtatttagctcatttacatttccaatgctat
accaaaagtcccccatacccacccacccccactccccctttttggccctg
gcgttcccctgttctggggcatataaagtttgtgtgttcaatgggcctct
ctttccagtgatggccgactaggccatcctttgatacatatgcagctaga
gtcaagagctccggggtactggttagttcataatgttgatccacctatag
ggttgcagatccctttagctccttgggtacttctctagctcctccattgg
ggagccttgtgatccatccattacctgattgtgggcatccactttctgtg
tttgctaggccccggcataatctcacagagacagctacatctgggatcct
ttccataaatctgctagtgatagcaatggggtcaagcgattggatagctg
tattaggcctcacgaatatatcgaatttgtgaactttttcaaaggtcact
gtaccgatctgaccattcatgcctacagccctagaaggtcagagataata
tctggtacttctgcgcagattccttctgtagcacaacaaccggtacatc
gaattcaggtccaccagcccagggatggccccacccacagtgggctgggc
cattctccaaaaatcactaattaagaaaatgcccaacaggcttacctaca
gcccaatgttacggaggcatttttctcaattgagggtccctcctctcaga
tgactctatcttgtgtcaaggtgacataaaactatccagcacacagtctg
tgcctcctctgaataggtgtaagagcaacagaagaccctcgtccctgtag
gacctgagttcagagacggcctgcagtgagagagagattctctgagattc
ctggcccaggtaggaacatttaggcttggtctagtcacctcgatgcacct
ttggctggcagtagatgccaattgcctaccagggccgggctgggtaccat
ctttgttcaagagtagctgccctgccctgtgccagtcgagttattttaag
ggtggtagctccagctccatctcagtcttgatcacctgctggaatagccc
ctcccttatcggcttcgttcttgaatttcctgttaccttcccagggagat
ttcatcctaaaattactagaagattggcggtggaggggtggtgcttgcca
ttagtcctaacattctgaggcaggtggatgtgaaggaaaatgagattttg
taacttgtgattcatgtacaaaagttgtccatgagcccggatgccagggc
agggctcttgactgtaaagatgaaaaagaatgcaaggacgcaagcaaggc
tatcttgtctgagtccacaccatctggccggaacctcccctctgtctact
gccccttggcgctgggtaaagtcatacatcaactggttgctatgtgaaca
aagataagcccccagcccacaggaacaaagtcctgatgcccttggctgac
atgtaatctttctgtaatgtttgaatacgccatagtgtgtctagtgtgtc
gctatgctgattccacaccctaagccctcacccataaaaaccccttagct
tttgagctcgaagcgacatccgtatctctgatgtgagatgcacgtcgtca
actccgtcatttaacgacctcatgtattacggcaagatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167215188_167216291
seq2: B6Ng01-205K20.g_67_1156

seq1  GAATTCAGGTCCACCAGCCCAGGGATGGCCCCACCCACAGTGGGCTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCACCAGCCCAGGGATGGCCCCACCCACAGTGGGCTGGGC  50

seq1  CATTCTCCAAAAATCACTAATTAAGAAAATGCCCAACAGGCTTACCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCAAAAATCACTAATTAAGAAAATGCCCAACAGGCTTACCTACA  100

seq1  GCCCAATGTTACGGAGGCATTTTTCTCAATTGAGGGTCCCTCCTCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATGTTACGGAGGCATTTTTCTCAATTGAGGGTCCCTCCTCTCAGA  150

seq1  TGACTCTATCTTGTGTCAAGGTGACATAAAACTATCCAGCACACAGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTATCTTGTGTCAAGGTGACATAAAACTATCCAGCACACAGTCTG  200

seq1  TGCCTCCTCTGAATAGGTGTAAGAGCAACAGAAGACCCTCGTCCCTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTCTGAATAGGTGTAAGAGCAACAGAAGACCCTCGTCCCTGTAG  250

seq1  GACCTGAGTTCAGAGACGGCCTGCAGTGAGAGAGAGATTCTCTGAGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGAGTTCAGAGACGGCCTGCAGTGAGAGAGAGATTCTCTGAGATTC  300

seq1  CTGGCCCAGGTAGGAACATTTAGGCTTGGTCTAGTCACCTCGATGCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCAGGTAGGAACATTTAGGCTTGGTCTAGTCACCTCGATGCACCT  350

seq1  TTGGCTGGCAGTAGATGCCAATTGCCTACCAGGGCCGGGCTGGGTACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGCAGTAGATGCCAATTGCCTACCAGGGCCGGGCTGGGTACCAT  400

seq1  CTTTGTTCAAGAGTAGCTGCCCTGCCCTGTGCCAGTCGAGTTATTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCAAGAGTAGCTGCCCTGCCCTGTGCCAGTCGAGTTATTTTAAG  450

seq1  GGTGGTAGCTCCAGCTCCATCTCAGTCTTGATCACCTGCTGGAATAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGCTCCAGCTCCATCTCAGTCTTGATCACCTGCTGGAATAGCCC  500

seq1  CTCCCTTATCGGCTTCGTTCTTGAATTTCCTGTTACCTTCCCAGGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTATCGGCTTCGTTCTTGAATTTCCTGTTACCTTCCCAGGGAGAT  550

seq1  TTCATCCTAAAATTACTAGAAGATTGGCGGTGGAGGGGTGGTGCTTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTAAAATTACTAGAAGATTGGCGGTGGAGGGGTGGTGCTTGCCA  600

seq1  TTAGTCCTAACATTCTGAGGCAGGTGGATGTGAAGGAAAATGAGATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCTAACATTCTGAGGCAGGTGGATGTGAAGGAAAATGAGATTTTG  650

seq1  TAACTTGTGATTCATGTACAAAAGTTGTCCATGAGCCCGGATGCCAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTGATTCATGTACAAAAGTTGTCCATGAGCCCGGATGCCAGGGC  700

seq1  AGGGCTCTTGACTGTAAAGATGAAAAAGAATGCAAGGACGCAGGCAAGGC  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGGCTCTTGACTGTAAAGATGAAAAAGAATGCAAGGACGCAAGCAAGGC  750

seq1  TATCTTGTCTGAGTCCACACCATCTGGCCGGAACCTCCCCTCTGTCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGTCTGAGTCCACACCATCTGGCCGGAACCTCCCCTCTGTCTACT  800

seq1  GCCCCTTGGCGCTGGGTAAAGTCATACATCAACTGGTTGCTATGTGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTGGCGCTGGGTAAAGTCATACATCAACTGGTTGCTATGTGAACA  850

seq1  AAGATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCCTTTGGCTGA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCC-TTGGCTGA  899

seq1  CATGTAATCTTTCTGTTAATGTTTGAATACGCCAATAGTGTGTCTAGTGT  950
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  CATGTAATCTTTCTG-TAATGTTTGAATACGCC-ATAGTGTGTCTAGTGT  947

seq1  GTCGCTATGCTGAATTCCACACCCCTAAGCCCCTCACCCCATAAAAACCC  1000
      |||||||||||| |||||||| ||||||| |||||| |||||||||||||
seq2  GTCGCTATGCTG-ATTCCACA-CCCTAAG-CCCTCA-CCCATAAAAACCC  993

seq1  C-TAGCTTTTGAGCCTCGAGGCCGACATCCGTTATCTCCTGTGTGAGATG  1049
      | ||||||||||| ||||| | ||||||||| ||||||   |||||||||
seq2  CTTAGCTTTTGAG-CTCGAAG-CGACATCCG-TATCTCTGATGTGAGATG  1040

seq1  CACGTCGGTCCAGAGCTCCGTCATTAAACGACCTCATGTAATTACAGCAA  1099
      |||||| |||   | |||||||||| ||||||||||||| ||||| ||||
seq2  CACGTC-GTC---AACTCCGTCATTTAACGACCTCATGT-ATTACGGCAA  1085

seq1  GATGG  1104
      |||||
seq2  GATGG  1090