BAC Information

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BAC

Clone NameB6Ng01-205L02
Chromosome2 (Build37)
Map Location 35,592,575 - 35,810,593
singlet/doubletdoublet
Overlap geneTtll11
Upstream geneGapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip
Downstream geneNdufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L02.bB6Ng01-205L02.g
ACCGA025307GA025308
length9631,045
definitionB6Ng01-205L02.b B6Ng01-205L02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,809,655 - 35,810,593)(35,592,575 - 35,593,605)
sequence
gaattctatagtgatcgaaggaaccctgcctctttctcctgggcttagtt
atttagggactaaggatttaatgaggctgggtcctgtccttattctaccc
ctgtggttcattacagaggcttgattgtttaactgctttgagttctgatt
tcttcatgtgtcaatcagaaataacatgtctacctatttcatagcattgc
catgaaggtgagttaaatagcacataagaacacacagcaaattccatgac
ctcagtatgcagtggccactacttttagtatagaaatttctggcataaga
ttcactttcttaacacatgacctatgacatcacagtggggtgtctctgtg
catgacttagggtcaggaggaggaaataaatttaggggagccctgagcac
atctaccttagccaaatgagtcctctgggggaacctcttctcttggggac
attattttgactgtactgtgtgcttcagaatgaagccaaaacatcctcca
ttattggaaaggaaaggaaggccagggctttgcaggtctgagaatagtga
caacctacgtgtggcatgagggaagcagccaagatctagggagtgtccca
ggtcactcagcagctcagtggccgcagaagacgacctgcaggtgttggaa
tccccttgcttagtctccactcagactttgtttctgccttggaaattttc
ccatctcagtttgtttgttgtttgtttttatgttgttgagtttttttgtt
tgtttggctttgtttggttgttgttgttttccgagacagggtttctctgt
gtggtccttggaggtccctagaaattcacttaagtagagattcacctgcc
ttctgtcctcttgagtgcttgagatttaaaggattgcaccaccaccctcc
tggccttaccctccgttttccttgaaggaccttcttctccttctcattta
gtgagactttgtc
gaattccttgaaggctagttacataccacggctccttcccctgatccttc
cctgcttccggcgctcccagttaaaccttggtgctgtttccagctctcag
cttggtttttagtttcctcggttgaccctgttatgtccttctatattctt
tccccccaacacccaagtctaaggtcagggattgcattcagttgccatgt
ctctttaaccttgtctaatctggaactttccatagccttttctggtcttt
tctgtgatgacaggagaaatacgatcagtcacactcctggctccttgtta
aagcaacatcagtaacaaatggagacaaagctgggtgtatctggtgtgtc
tttaggaccagtttctggctgtcttgcacagggcatattgagtctttgga
gagacacacatttggaggcgcgctgcccgtggcctggctgtctttcctgg
ttggtgaggctccttgtcagtgtttcaccttttctttctccactcatgga
ggtgctggttttagttgtagttttgccctctttgtaacttagcagcctga
gaggcagcacacagaggccataaaagcagggcttctgtcagagtgtcctg
tgggttcggcagctggagcatttcttagctgactgggtcgtgcagtgatg
gctgtgcagagatggctgggaagggtgcctttccagtgctgagtttcact
taacactgggccctcaacaaggtcctccccaccgtccccatgggactgat
gcttcctgttgttggagatagagttcattcctcagggttaccccacagtt
tgcaggtgtggtccctgggggccttcttcaagcagtatccttagcctact
gattgtacccagcgttgtttctgaatgttgtcttcactgtctgacctgac
atccaggctcctcccttgctccatccctgctccatcctggcaaccttggg
gaaatggcattaactggtcaagatcaggaactttcttacgttctttacag
agacccttgggtagaaaattgcaagtttgtgctctcctcttgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_35809655_35810593
seq2: B6Ng01-205L02.b_46_1004 (reverse)

seq1  AAGTCTC-CT-AATGAGAAGGAGA--GAGGTCC-TCAA-GAAAACGGAGG  44
      ||||||| || |||||||||||||   |||||| |||| |||||||||||
seq2  AAGTCTCACTAAATGAGAAGGAGAAGAAGGTCCTTCAAGGAAAACGGAGG  50

seq1  --TAGGCCAGGA-GGTGGTGGTGCAATCCTTT-AATCTC-AGCACTCAAG  89
         ||||||||| ||||||||||||||||||| |||||| ||||||||||
seq2  GTAAGGCCAGGAGGGTGGTGGTGCAATCCTTTAAATCTCAAGCACTCAAG  100

seq1  AGG-CAG-AGGCAGGTGAATCTCTACTT-AGTG-AGTTCTA-GGACCTCC  134
      ||| ||| |||||||||||||||||||| |||| | ||||| ||||||||
seq2  AGGACAGAAGGCAGGTGAATCTCTACTTAAGTGAATTTCTAGGGACCTCC  150

seq1  -AGGACCACACAGAGAAACCCTGTCTCGG-AAACAACAACAACCAAAC-A  181
       |||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  AAGGACCACACAGAGAAACCCTGTCTCGGAAAACAACAACAACCAAACAA  200

seq1  AGCCAAACAAAC-AAAAAACTCAACAACATAAAAACAAACAACAAACAAA  230
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACAAACAAAAAAACTCAACAACATAAAAACAAACAACAAACAAA  250

seq1  CTGAGATGGGAAAATTTCCAAGGCAGAAACAAAGTCTGAGTGGAGACTAA  280
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGGGAAAATTTCCAAGGCAGAAACAAAGTCTGAGTGGAGACTAA  300

seq1  GCAAGGGGATTCCAACACCTGCAGGTCGTCTTCTGCGGCCACTGAGCTGC  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGGATTCCAACACCTGCAGGTCGTCTTCTGCGGCCACTGAGCTGC  350

seq1  TGAGTGACCTGGGACACTCCCTAGATCTTGGCTGCTTCCCTCATGCCACA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGACCTGGGACACTCCCTAGATCTTGGCTGCTTCCCTCATGCCACA  400

seq1  CGTAGGTTGTCACTATTCTCAGACCTGCAAAGCCCTGGCCTTCCTTTCCT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGTTGTCACTATTCTCAGACCTGCAAAGCCCTGGCCTTCCTTTCCT  450

seq1  TTCCAATAATGGAGGATGTTTTGGCTTCATTCTGAAGCACACAGTACAGT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATAATGGAGGATGTTTTGGCTTCATTCTGAAGCACACAGTACAGT  500

seq1  CAAAATAATGTCCCCAAGAGAAGAGGTTCCCCCAGAGGACTCATTTGGCT  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATGTCCCCAAGAGAAGAGGTTCCCCCAGAGGACTCATTTGGCT  550

seq1  AAGGTAGATGTGCTCAGGGCTCCCCTAAATTTATTTCCTCCTCCTGACCC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGATGTGCTCAGGGCTCCCCTAAATTTATTTCCTCCTCCTGACCC  600

seq1  TAAGTCATGCACAGAGACACCCCACTGTGATGTCATAGGTCATGTGTTAA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATGCACAGAGACACCCCACTGTGATGTCATAGGTCATGTGTTAA  650

seq1  GAAAGTGAATCTTATGCCAGAAATTTCTATACTAAAAGTAGTGGCCACTG  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGAATCTTATGCCAGAAATTTCTATACTAAAAGTAGTGGCCACTG  700

seq1  CATACTGAGGTCATGGAATTTGCTGTGTGTTCTTATGTGCTATTTAACTC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAGGTCATGGAATTTGCTGTGTGTTCTTATGTGCTATTTAACTC  750

seq1  ACCTTCATGGCAATGCTATGAAATAGGTAGACATGTTATTTCTGATTGAC  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCATGGCAATGCTATGAAATAGGTAGACATGTTATTTCTGATTGAC  800

seq1  ACATGAAGAAATCAGAACTCAAAGCAGTTAAACAATCAAGCCTCTGTAAT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGAAATCAGAACTCAAAGCAGTTAAACAATCAAGCCTCTGTAAT  850

seq1  GAACCACAGGGGTAGAATAAGGACAGGACCCAGCCTCATTAAATCCTTAG  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACAGGGGTAGAATAAGGACAGGACCCAGCCTCATTAAATCCTTAG  900

seq1  TCCCTAAATAACTAAGCCCAGGAGAAAGAGGCAGGGTTCCTTCGATCACT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAATAACTAAGCCCAGGAGAAAGAGGCAGGGTTCCTTCGATCACT  950

seq1  ATAGAATTC  939
      |||||||||
seq2  ATAGAATTC  959

seq1: chr2_35592575_35593605
seq2: B6Ng01-205L02.g_71_1115

seq1  GAATTCCTTGAAGGCTAGTTACATACCACGGCTCCTTCCCCTGATCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAAGGCTAGTTACATACCACGGCTCCTTCCCCTGATCCTTC  50

seq1  CCTGCTTCCGGCGCTCCCAGTTAAACCTTGGTGCTGTTTCCAGCTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTCCGGCGCTCCCAGTTAAACCTTGGTGCTGTTTCCAGCTCTCAG  100

seq1  CTTGGTTTTTAGTTTCCTCGGTTGACCCTGTTATGTCCTTCTATATTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTTTAGTTTCCTCGGTTGACCCTGTTATGTCCTTCTATATTCTT  150

seq1  TCCCCCCAACACCCAAGTCTAAGGTCAGGGATTGCATTCAGTTGCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCAACACCCAAGTCTAAGGTCAGGGATTGCATTCAGTTGCCATGT  200

seq1  CTCTTTAACCTTGTCTAATCTGGAACTTTCCATAGCCTTTTCTGGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAACCTTGTCTAATCTGGAACTTTCCATAGCCTTTTCTGGTCTTT  250

seq1  TCTGTGATGACAGGAGAAATACGATCAGTCACACTCCTGGCTCCTTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATGACAGGAGAAATACGATCAGTCACACTCCTGGCTCCTTGTTA  300

seq1  AAGCAACATCAGTAACAAATGGAGACAAAGCTGGGTGTATCTGGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACATCAGTAACAAATGGAGACAAAGCTGGGTGTATCTGGTGTGTC  350

seq1  TTTAGGACCAGTTTCTGGCTGTCTTGCACAGGGCATATTGAGTCTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGACCAGTTTCTGGCTGTCTTGCACAGGGCATATTGAGTCTTTGGA  400

seq1  GAGACACACATTTGGAGGCGCGCTGCCCGTGGCCTGGCTGTCTTTCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACACATTTGGAGGCGCGCTGCCCGTGGCCTGGCTGTCTTTCCTGG  450

seq1  TTGGTGAGGCTCCTTGTCAGTGTTTCACCTTTTCTTTCTCCACTCATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAGGCTCCTTGTCAGTGTTTCACCTTTTCTTTCTCCACTCATGGA  500

seq1  GGTGCTGGTTTTAGTTGTAGTTTTGCCCTCTTTGTAACTTAGCAGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGTTTTAGTTGTAGTTTTGCCCTCTTTGTAACTTAGCAGCCTGA  550

seq1  GAGGCAGCACACAGAGGCCATAAAAGCAGGGCTTCTGTCAGAGTGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCACACAGAGGCCATAAAAGCAGGGCTTCTGTCAGAGTGTCCTG  600

seq1  TGGGTTCGGCAGCTGGAGCATTTCTTAGCTGACTGGGTCGTGCAGTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCGGCAGCTGGAGCATTTCTTAGCTGACTGGGTCGTGCAGTGATG  650

seq1  GCTGTGCAGAGATGGCTGGGAAGGGTGCCTTTCCAGTGCTGAGTTTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCAGAGATGGCTGGGAAGGGTGCCTTTCCAGTGCTGAGTTTCACT  700

seq1  TAACACTGGGCCCTCAACAAGGTCCTCCCCACCGTCCCCATGGGACTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGGGCCCTCAACAAGGTCCTCCCCACCGTCCCCATGGGACTGAT  750

seq1  GCTTCCTGTTGTTGGAGATAGAGTTCATTCCTCAGGGTTACCCCACAG-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTTCCTGTTGTTGGAGATAGAGTTCATTCCTCAGGGTTACCCCACAGTT  800

seq1  TGCAGGTGTGGTCCCTGGGGGCC-TCTTCAAGCAGTATCC-TAGCCTACT  847
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TGCAGGTGTGGTCCCTGGGGGCCTTCTTCAAGCAGTATCCTTAGCCTACT  850

seq1  GA-TGTACCCCAGCGTTGTTTCTGAATG-TGTCTTCACTGTCTGACCTGA  895
      || |||| |||||||||||||||||||| |||||||||||||||||||||
seq2  GATTGTA-CCCAGCGTTGTTTCTGAATGTTGTCTTCACTGTCTGACCTGA  899

seq1  CATCCAGGCTCCTCCCTTGCTCCATCCCTGCTCCATCCTGGCAACCTT-G  944
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATCCAGGCTCCTCCCTTGCTCCATCCCTGCTCCATCCTGGCAACCTTGG  949

seq1  GGAAATGGCATTAACTGGCCAAGATCAGGAACATTC-TACG-TCCTTACA  992
      |||||||||||||||||| ||||||||||||| ||| |||| || |||||
seq2  GGAAATGGCATTAACTGGTCAAGATCAGGAACTTTCTTACGTTCTTTACA  999

seq1  GAGACACTT-GGTAG-AAATTGCAAGTTGG----CTCCTC-TGTCT  1031
      ||||| ||| ||||| |||||||||||| |    |||||| |||||
seq2  GAGACCCTTGGGTAGAAAATTGCAAGTTTGTGCTCTCCTCTTGTCT  1045