BAC Information

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BAC

Clone NameB6Ng01-206F22
Chromosome2 (Build37)
Map Location 144,099,222 - 144,100,340
singlet/doubletsinglet
Overlap gene8430406I07Rik
Upstream geneLOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5
Downstream geneOvol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik, Slc24a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206F22.bB6Ng01-206F22.g
ACCGA025803GA025804
length1,1251,157
definitionB6Ng01-206F22.b B6Ng01-206F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagttaggaggggaactgttctactcctgtattcttagtcctgc
tgaaattatctgcatgtgaaaggcttaaaagaaatttaaccctgctggaa
ttaaaatttaaagagatgccgtgttagcctacagactacttaatgaatca
gaagacaaacttgttaaaaacaggaggaacccaagtagcagagtacttgc
ctagcatacacaaggctgagtttaaccactaacactatcaaataataaaa
aaaattactgcacccattgccatgcagtttaattcccagctacagacctc
tcctggctagattcttcacatgtgtaactacgaacatctagatttgtgga
ccccgtgtactcaggatcagaggcaggcagatctctgagttagaggccat
cctggtttctagagttccaggacagccagggcaacaaagggaaaccttgt
ctcaaaaaacaagcaagcaaacaaacaaccgaaaaggagagcagagacta
gttgagtggttgtcactacccatcttaggaaggcactcaatccagcatgc
aatccttgcccctcccatctgaagaatgatatgaagttgtgagtgcttct
cagccttcctaacagtgcaaccccttcatataatttaatacacctcatgt
tgtagtgaccccaaccataaaattattttcattacttcataactgtaact
ttgcaactgttatgaatcataatgtaaatatctgtgttctccagtggtct
taggagaccctgcgaaagggctgttggaccctttagggttatgacccaca
ggttgaaaaccactggtataaaaaaaagccttggtcacttttgccacatc
cacaccctacataaattaaatgcttatactttttcggtgtttttttcctt
aagatacccgggaaaggaggacaataattttaaaataaaagtgctcatat
gtcaccttcatatgtcacctttgtttcttggggaagcaaaggcctaacga
acatctatataagctccaattttgaccaagacatttaatataatccttag
gagaacagcattcctctgacgccaaatgattgccttttccctccccactc
gagggtcttcttatggtagccagat
gaattcttggaagtccggacacgggaagtcctttcgttatgcaattggct
tatgagaatgctaatgcaatttgccgagctgcgattcaaccgcataaggg
aacgacagatttggcgggatatgtccgcctttgcgcagacatcgggcctt
cctgcgagaccttgcagggaacccacgcgcaggcaatgttctcaaggaaa
cgagggaaaaatgtatgctttaagtgtggaggtttagatcattttagaat
tgattgtcctcagaacaagggtgccgaggttagacaaacaggccgtggcc
caggaatatgtccccggtgtggaaagggccgccactgggcgaaagattgt
aagcataaaacgagggttttgagccgcccggtgccgggaaacgaggaaag
gggtcagccccaggccccgagttactcaaagaagacagcttatggggcta
taaatctgctgcccagccaacaagatcagttcttgagcttgtcaggtcaa
acccaggaaatgcaagactggacctctgttccactgtccatgtagcatta
accccagaagtgggagtccaaactctgcctaccggagtttttggaccact
acctgtaggaacctgtggttttctcttaggacgaagcagttctattgtag
aaggcctgcagatttatccaggtgttataagtaatgattatgagggagaa
attaaaatcatagccgcttgccctcgtggtgctataactatacccgctaa
tcagaaaattgctcaacttactttgatccctttgcgctggtcactatcta
aattctttgaaaatgaagaaggacagaataactttgactcccttggcgta
aattgggtgaaatctatcactaatcagagacctaacccttaaattgattc
ttgatggaaaagctttgaaggattaatagataccggggcccgatgtaacg
ataattagagggcagactgggcctcaaactggcccctgtctgtttctgac
tcacttcaaggaattgggtatgccagtaccaaacgtagttcaaattgcta
actggagagatgagatggaaaatcagaaatatcagcgtatgttatgcgaa
ttgcttaactgtgggcaaggaatcgtgtccacgattgacgtatccgtgtg
cacgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_144099222_144100340
seq2: B6Ng01-206F22.b_49_1173 (reverse)

seq1  ATCTGGGCTA-CATAAGGAGACCCTCGGAGTGGGGGAGGGGAAA-GCAAA  48
      |||| ||||| |||||| |||||||| |||| |||||||| ||| |||| 
seq2  ATCT-GGCTACCATAAGAAGACCCTC-GAGT-GGGGAGGGAAAAGGCAAT  47

seq1  CCATTGGCGTCAGA-GAATGCTGGTCTCCTAAGGATTATA-TAAATGTCT  96
      |  ||||||||||| |||||||| |||||||||||||||| |||||||| 
seq2  CATTTGGCGTCAGAGGAATGCTGTTCTCCTAAGGATTATATTAAATGTC-  96

seq1  TTGGTCAAAATTGGAGCTTATATAGATGTTCCTTA-GCCTTTGCTTCCCC  145
      ||||||||||||||||||||||||||||||| ||| ||||||||||||||
seq2  TTGGTCAAAATTGGAGCTTATATAGATGTTCGTTAGGCCTTTGCTTCCCC  146

seq1  AAGAAACAAAGGTGACATATG-AGGTGACATATGAGCACTTTTATTTTAA  194
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGAAACAAAGGTGACATATGAAGGTGACATATGAGCACTTTTATTTTAA  196

seq1  AATTATTGTCCTCCTTT-CCGGGTATCTT-AGGAAAAAAACACCGAAAAA  242
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  AATTATTGTCCTCCTTTCCCGGGTATCTTAAGGAAAAAAACACCGAAAAA  246

seq1  GTATAAGCATTTAA-TTATGTA-GGTGTGGATGTGGCAAAAGTGACCAAG  290
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  GTATAAGCATTTAATTTATGTAGGGTGTGGATGTGGCAAAAGTGACCAAG  296

seq1  GCTTTTTTTTATACCAGTGGTTTTCAACCTGTGGGTCATAACCCTTAAGG  340
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTTTTTTTTATACCAGTGGTTTTCAACCTGTGGGTCATAACCCTAAAGG  346

seq1  GTCCAACAGCCCTTTCGCAGGGTCTCCTAAGACCACTGGAGAACACAGAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACAGCCCTTTCGCAGGGTCTCCTAAGACCACTGGAGAACACAGAT  396

seq1  ATTTACATTATGATTCATAACAGTTGCAAAGTTACAGTTATGAAGTAATG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTATGATTCATAACAGTTGCAAAGTTACAGTTATGAAGTAATG  446

seq1  AAAATAATTTTATGGTTGGGGTCACTACAACATGAGGTGTATTAAATTAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTTTATGGTTGGGGTCACTACAACATGAGGTGTATTAAATTAT  496

seq1  ATGAAGGGGTTGCACTGTTAGGAAGGCTGAGAAGCACTCACAACTTCATA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGGGTTGCACTGTTAGGAAGGCTGAGAAGCACTCACAACTTCATA  546

seq1  TCATTCTTCAGATGGGAGGGGCAAGGATTGCATGCTGGATTGAGTGCCTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTCAGATGGGAGGGGCAAGGATTGCATGCTGGATTGAGTGCCTT  596

seq1  CCTAAGATGGGTAGTGACAACCACTCAACTAGTCTCTGCTCTCCTTTTCG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGATGGGTAGTGACAACCACTCAACTAGTCTCTGCTCTCCTTTTCG  646

seq1  GTTGTTTGTTTGCTTGCTTGTTTTTTGAGACAAGGTTTCCCTTTGTTGCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGTTTGCTTGCTTGTTTTTTGAGACAAGGTTTCCCTTTGTTGCC  696

seq1  CTGGCTGTCCTGGAACTCTAGAAACCAGGATGGCCTCTAACTCAGAGATC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTCCTGGAACTCTAGAAACCAGGATGGCCTCTAACTCAGAGATC  746

seq1  TGCCTGCCTCTGATCCTGAGTACACGGGGTCCACAAATCTAGATGTTCGT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTCTGATCCTGAGTACACGGGGTCCACAAATCTAGATGTTCGT  796

seq1  AGTTACACATGTGAAGAATCTAGCCAGGAGAGGTCTGTAGCTGGGAATTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACATGTGAAGAATCTAGCCAGGAGAGGTCTGTAGCTGGGAATTA  846

seq1  AACTGCATGGCAATGGGTGCAGTAATTTTTTTTATTATTTGATAGTGTTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCATGGCAATGGGTGCAGTAATTTTTTTTATTATTTGATAGTGTTA  896

seq1  GTGGTTAAACTCAGCCTTGTGTATGCTAGGCAAGTACTCTGCTACTTGGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAACTCAGCCTTGTGTATGCTAGGCAAGTACTCTGCTACTTGGG  946

seq1  TTCCTCCTGTTTTTAACAAGTTTGTCTTCTGATTCATTAAGTAGTCTGTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTGTTTTTAACAAGTTTGTCTTCTGATTCATTAAGTAGTCTGTA  996

seq1  GGCTAACACGGCATCTCTTTAAATTTTAATTCCAGCAGGGTTAAATTTCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACACGGCATCTCTTTAAATTTTAATTCCAGCAGGGTTAAATTTCT  1046

seq1  TTTAAGCCTTTCACATGCAGATAATTTCAGCAGGACTAAGAATACAGGAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCCTTTCACATGCAGATAATTTCAGCAGGACTAAGAATACAGGAG  1096

seq1  TAGAACAGTTCCCCTCCTAACTTGAATTC  1119
      |||||||||||||||||||||||||||||
seq2  TAGAACAGTTCCCCTCCTAACTTGAATTC  1125