BAC Information

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BAC

Clone NameB6Ng01-206K05
Chromosome2 (Build37)
Map Location 143,026,664 - 143,027,616
singlet/doubletsinglet
Overlap geneLOC668915
Upstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor
Downstream geneLOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206K05.bB6Ng01-206K05.g
ACCGA026003GA026004
length6931,076
definitionB6Ng01-206K05.b B6Ng01-206K05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgaatcccattttttaatagggttatttggtt
ttctggagtacatcttcttggattctttatatatattgcatattagtctg
ttatctgatttaggattgttaaagatcctttcccaatcttttggtggcct
ttttgtctattgacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtctattcttgatcttacagcacaagccattggtgttc
tgttcaggacaccaatgttctgtttcccctgagcccatatattcgaggct
tttccccactttctcctctataaaattcagtgtctctggtttcatgtaaa
gttccttgatctacttagacttgagctttgtataaggagataagaatgga
tctattcacattcttctacatgataactgccagttgtgcagtaccattta
ttgaaaatgctgtctagccaaggagctgaaggggtctgtaatcctatagg
aggaacaacaatatgaactaaccagtaccccctgagcatgtgtctctagc
tgcatatgtaggagaagatcacctagttggccatcattgggaggagagat
ccttggtcatgcaaagattgtatgccccagtacaggggaatgccagggtc
acgaagcaggagtgggtgggttgaggagcagggtgggggaaag
gaattcatagaaccatagacttgggaagagtcttgagccttttgtgtcaa
tgcattagaaaacaaaatcttacatctacagaacactaaggctgtgttct
tgtcttctggtaataacagagattataaatgttacttttctataccagag
gctttgccttcgattagttatatgattctggccgaattatgggatctcat
tggatctgtgcccacatccatgtgatgaactgctaagtctctggtctctc
agagtctttacaatgagtctgcatagagtatgtacagaaaaacctctcag
agtcttattacagagccacaaggtacaacacaagcaattcatacaaaact
tatgatattgagcataactgcaaaaaactttattgttccttttccccctc
actcccctcttccccacccccaccccgcttgtattttgagataaggtctt
ttttgttaagttatttatttactttacatccaaattacagcttcccctcc
ctccttttcgcccaatccctccctccctcttgacccccacttcatctttg
acatatcaagttgctgtaggattagggcattttctcctagggaaggcagt
ccaattagggaatccaaaggcaggcaaagtagtcagagacagccctgctc
ttgctttaggaaacccacatgaagacctagctgtacaactgttatatatg
tgcagagggccatcccttgcatggtctctggttgacagttttctctatga
ccctctatggagtgaggctagttcactctgtaacttttcttgtgatgtcc
ttgacccctctggctccttcaatccttccttcccctcttccatagggttg
cccaagctccacttaatgtttggctgtgagtctctgtatcagtttccccc
agtctctgggtgaagcctcctcaggatgacaagttatactagagtctcca
ttgtccctagatttcttagcaaagaggcctgccccccatttagttctcct
ccaagcacctctttccccttaacctccatcccttccgtttccccctttcc
tccctaccctccttccaccaagtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143026664_143027616
seq2: B6Ng01-206K05.g_65_1020

seq1  GAATTCATAGAACCATAGACTTGGGAAGAGTCTTGAGCCTTTTGTGTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAACCATAGACTTGGGAAGAGTCTTGAGCCTTTTGTGTCAA  50

seq1  TGCATTAGAAAACAAAATCTTACATCTACAGAACACTAAGGCTGTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAAAACAAAATCTTACATCTACAGAACACTAAGGCTGTGTTCT  100

seq1  TGTCTTCTGGTAATAACAGAGATTATAAATGTTACTTTTCTATACCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTGGTAATAACAGAGATTATAAATGTTACTTTTCTATACCAGAG  150

seq1  GCTTTGCCTTCGATTAGTTATATGATTCTGGCCGAATTATGGGATCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCCTTCGATTAGTTATATGATTCTGGCCGAATTATGGGATCTCAT  200

seq1  TGGATCTGTGCCCACATCCATGTGATGAACTGCTAAGTCTCTGGTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTGTGCCCACATCCATGTGATGAACTGCTAAGTCTCTGGTCTCTC  250

seq1  AGAGTCTTTACAATGAGTCTGCATAGAGTATGTACAGAAAAACCTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTTACAATGAGTCTGCATAGAGTATGTACAGAAAAACCTCTCAG  300

seq1  AGTCTTATTACAGAGCCACAAGGTACAACACAAGCAATTCATACAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATTACAGAGCCACAAGGTACAACACAAGCAATTCATACAAAACT  350

seq1  TATGATATTGAGCATAACTGCAAAAAACTTTATTGTTCCTTTTCCCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATTGAGCATAACTGCAAAAAACTTTATTGTTCCTTTTCCCCCTC  400

seq1  ACTCCCCTCTTCCCCACCCCCACCCCGCTTGTATTTTGAGATAAGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTCTTCCCCACCCCCACCCCGCTTGTATTTTGAGATAAGGTCTT  450

seq1  TTTTGTTAAGTTATTTATTTACTTTACATCCAAATTACAGCTTCCCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAGTTATTTATTTACTTTACATCCAAATTACAGCTTCCCCTCC  500

seq1  CTCCTTTTCGCCCAATCCCTCCCTCCCTCTTGACCCCCACTTCATCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTCGCCCAATCCCTCCCTCCCTCTTGACCCCCACTTCATCTTTG  550

seq1  ACATATCAAGTTGCTGTAGGATTAGGGCATTTTCTCCTAGGGAAGGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAAGTTGCTGTAGGATTAGGGCATTTTCTCCTAGGGAAGGCAGT  600

seq1  CCAATTAGGGAATCCAAAGGCAGGCAAAGTAGTCAGAGACAGCCCTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAGGGAATCCAAAGGCAGGCAAAGTAGTCAGAGACAGCCCTGCTC  650

seq1  TTGCTTTAGGAAACCCACATGAAGACCTAGCTGTACAACTGTTATATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTAGGAAACCCACATGAAGACCTAGCTGTACAACTGTTATATATG  700

seq1  TGCAGAGGGCCATCCCTTGCATGGTCTCTGGTTGACAGTTTTCTCTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGGCCATCCCTTGCATGGTCTCTGGTTGACAGTTTTCTCTATGA  750

seq1  CCCTCTATGGAGTGAGGCTAGTTCACTCTGTAACTTTTCTTGTGATGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATGGAGTGAGGCTAGTTCACTCTGTAACTTTTCTTGTGATGTCC  800

seq1  TTGACCCCTCTGGCTCCTTCAATCCTTCCTTCCCCTCTTCCATAGGGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCCTCTGGCTCCTTCAATCCTTCCTTCCCCTCTTCCATAGGGTTG  850

seq1  CCCAAGCTCCACTTAATGTTTGGCTGTGAGTCTCTGTATCAGTTTCCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCCAAGCTCCACTTAATGTTTGGCTGTGAGTCTCTGTATCAGTTTCCCCC  900

seq1  AGTTCCTGGGTGAAGCCT-CTCA-GATGAC-AGTTATACTAGAGTCTCCA  947
      |||  ||||||||||||| |||| |||||| |||||||||||||||||||
seq2  AGTCTCTGGGTGAAGCCTCCTCAGGATGACAAGTTATACTAGAGTCTCCA  950

seq1  TTGTCC  953
      ||||||
seq2  TTGTCC  956