BAC Information

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BAC

Clone NameB6Ng01-206K22
Chromosome2 (Build37)
Map Location 85,683,297 - 85,778,411
singlet/doubletdoublet
Overlap geneOlfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1
Upstream geneSlc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019
Downstream geneOlfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206K22.bB6Ng01-206K22.g
ACCGA026037GA026038
length1,1461,139
definitionB6Ng01-206K22.b B6Ng01-206K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,683,297 - 85,684,450)(85,777,265 - 85,778,411)
sequence
gaattccatgaatagtgatggaatgcagacatataacacacacacacaca
cacacacacacacacagatagataagaggtatcaatgcaaagagcttacc
acccagtttatgccaatgagttcatgcttgtgtacacatactgaaattga
atatacttcagttatagttgatgtcaattacacttcaacatatttgtcta
aaacagtcaagaagaaaacaaaaggaagttaggtaacacttctcatttct
gcatttgaaaacgtgttatttcacaagtcatccttcttagggattcttct
gaggggattggcaaagtcatgttttgcattagttgaacaatcatatggtt
gtgagttggatgattttctagactgtatttatttcttacactttatgcct
catttagaaatttataatcaatccattcttagcagcagcaagaataataa
aaaagtcctttagattgggctccataggtaaagtggtttccacacaatag
ggaagatttgagtttggaccctcagtttcatgtaaggcttgggacaataa
cacaaatatgcagtctcagtgtttctaggacagctgggaggtgggcagat
gaatctctggcagctcaagggacagttggtctggtataaagtgctgaaag
accaatacctgaggctgttctttcatatttacatgcatattcaaacacgg
actgtggcaagtatgtatgcattctcacagatattaatgcacttgtagta
gcatagccctttttaagatggcctttctcctcagtaagagttgcaataat
cttattaaaagaaaaaagtcaattgtatacttttgtagataaagacccag
acccagatattatttctgattcacagacacgacactgaactataataggt
acaggagtaagagataccttgcaatgagttaagtctcacacccacacctg
gctatgtcatgcaattgaacattgtgattttcagtaaatcccctccttca
ttatagatccatatttcattcaagagaggagatatgagcagatgcttcac
tcaccacaaggaccctgtttgttcctctgtgtgtagacatccaagtgcag
gcatacatcactgctagttgtccaagaacagtatctttctttatga
gaattctttgtttagctctgtaccccactatataagagggtaatcactct
ggagtctaacttcttgacttctttgtatatatttgatattaggcccctgt
catacttatgattggtgatcatttcataatctgttggtggcctttttgtc
ttcttgacagtgtcctttgccttacagaagctttgcaattttatgaggtc
ccatttgttgattcttgatctacatcacaagccattggtgttctgttcag
gaaattttccccggtgcccatatcttccaggatctactccactatctctt
aaataagtttcagtgtatctggttttatgggaaggtccttgagtcactgg
gacttgagctttgtgcaaggagataaggatgggtcgatttgccaccttct
acatgctaaccaccagttgagcccgcaccatttgttgaaaatgttgtcct
ttttccactggatggttttagcttcacagctttaattatctgatagcaca
ggtgcagatcatgcctacccagacaggatcacaatttacaaaattgcttt
agggtgaaggaggtaatcatgatccagtaataggcccaactgggataaac
ttccaagtgcacattatagtttgttatgaaaccgtagtcgccttcttaat
aaattatcagtgactcacactgtgtgtatatctagaatcattgctttgga
gaacttaattcccttgtgtcaaaaagaaaggaataaagaaagcacagaat
taaagattgtcagagaccataccgtgagaaagtgagcccttcacaatctc
ccaccctgacaggccaaatggctttcatacttggagccagttgtcactcc
ctcctccctgttcccttcctggtactcctggtacctgaggctgtaaaagc
tgaattatagtagtcccctcttccctatctcttcctgacttccatgactt
ccaagggacatgagttactctgagccgacctgataccccaagactgtcag
gaggatcttattgttccggagaataagaccacagatgctgccacctggag
cctgactttgccttcatgtcagcagatgctatttgttgttctatttatcc
cctcgaccccttcctagattccccccccgcaatgtatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85683297_85684450
seq2: B6Ng01-206K22.b_49_1194

seq1  GAATTCCATGAATAGTGATGGAATGCAGACATATAACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAATAGTGATGGAATGCAGACATATAACACACACACACACA  50

seq1  CACACACACACACACAGATAGATAAGAGGTATCAATGCAAAGAGCTTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAGATAGATAAGAGGTATCAATGCAAAGAGCTTACC  100

seq1  ACCCAGTTTATGCCAATGAGTTCATGCTTGTGTACACATACTGAAATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTTTATGCCAATGAGTTCATGCTTGTGTACACATACTGAAATTGA  150

seq1  ATATACTTCAGTTATAGTTGATGTCAATTACACTTCAACATATTTGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTCAGTTATAGTTGATGTCAATTACACTTCAACATATTTGTCTA  200

seq1  AAACAGTCAAGAAGAAAACAAAAGGAAGTTAGGTAACACTTCTCATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCAAGAAGAAAACAAAAGGAAGTTAGGTAACACTTCTCATTTCT  250

seq1  GCATTTGAAAACGTGTTATTTCACAAGTCATCCTTCTTAGGGATTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGAAAACGTGTTATTTCACAAGTCATCCTTCTTAGGGATTCTTCT  300

seq1  GAGGGGATTGGCAAAGTCATGTTTTGCATTAGTTGAACAATCATATGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATTGGCAAAGTCATGTTTTGCATTAGTTGAACAATCATATGGTT  350

seq1  GTGAGTTGGATGATTTTCTAGACTGTATTTATTTCTTACACTTTATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTGGATGATTTTCTAGACTGTATTTATTTCTTACACTTTATGCCT  400

seq1  CATTTAGAAATTTATAATCAATCCATTCTTAGCAGCAGCAAGAATAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGAAATTTATAATCAATCCATTCTTAGCAGCAGCAAGAATAATAA  450

seq1  AAAAGTCCTTTAGATTGGGCTCCATAGGTAAAGTGGTTTCCACACAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCCTTTAGATTGGGCTCCATAGGTAAAGTGGTTTCCACACAATAG  500

seq1  GGAAGATTTGAGTTTGGACCCTCAGTTTCATGTAAGGCTTGGGACAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTTGAGTTTGGACCCTCAGTTTCATGTAAGGCTTGGGACAATAA  550

seq1  CACAAATATGCAGTCTCAGTGTTTCTAGGACAGCTGGGAGGTGGGCAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATATGCAGTCTCAGTGTTTCTAGGACAGCTGGGAGGTGGGCAGAT  600

seq1  GAATCTCTGGCAGCTCAAGGGACAGTTGGTCTGGTATAAAGTGCTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTGGCAGCTCAAGGGACAGTTGGTCTGGTATAAAGTGCTGAAAG  650

seq1  ACCAATACCTGAGGCTGTTCTTTCATATTTACATGCATATTCAAACACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACCTGAGGCTGTTCTTTCATATTTACATGCATATTCAAACACGG  700

seq1  ACTGTGGCAAGTATGTATGCATTCTCACAGATATTAATGCACTTGTAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCAAGTATGTATGCATTCTCACAGATATTAATGCACTTGTAGTA  750

seq1  GCATAGCCCTTTTTAAGATGGCCTTTCTCCTCAGTAAGAGTTGCAATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCCCTTTTTAAGATGGCCTTTCTCCTCAGTAAGAGTTGCAATAAT  800

seq1  CTTATTAAAAGAAAAAAGTCAATTGTATACTTTTGTAGATAAAGACCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAAGAAAAAAGTCAATTGTATACTTTTGTAGATAAAGACCCAG  850

seq1  ACCCAGATATTATTTCTGATTCACAGACACGACACTGAACTATAATAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGATATTATTTCTGATTCACAGACACGACACTGAACTATAATAGGT  900

seq1  ACAGGAGTAAGAGATACCTTGCAATGAGTTAAGTCTCACACCCACACCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTAAGAGATACCTTGCAATGAGTTAAGTCTCACACCCACACCTG  950

seq1  GCTATGTCATGCAATTGAACATTGTGATTTTCAGTAAAT-CCCTCCTTCA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTATGTCATGCAATTGAACATTGTGATTTTCAGTAAATCCCCTCCTTCA  1000

seq1  TTATAGATTCAATATTTCATTCAAAGAGAGGAGAATATGAGCAGATGCTT  1049
      ||||||| || ||||||||||| |||||||||| ||||||||||||||||
seq2  TTATAGA-TCCATATTTCATTC-AAGAGAGGAG-ATATGAGCAGATGCTT  1047

seq1  CACTCACCACAAAGGACCCTGTTTGTTCTCTTGTGTTGTAGACATCAAAG  1099
      |||||||||| |||||||||||||||||   |||| |||||||||| |||
seq2  CACTCACCAC-AAGGACCCTGTTTGTTCCTCTGTG-TGTAGACATCCAAG  1095

seq1  TGCAGGCATTAACATTCACTGCTAGTTGTTCCCAGAACAGTATCTTTCTT  1149
      |||||||||  ||| ||||||||||||| ||| |||||||||||||||||
seq2  TGCAGGCAT--ACA-TCACTGCTAGTTG-TCCAAGAACAGTATCTTTCTT  1141

seq1  TATGA  1154
      |||||
seq2  TATGA  1146

seq1: chr2_85777265_85778411
seq2: B6Ng01-206K22.g_65_1203 (reverse)

seq1  GCATACATGGGGGGGGGGGGGACTAGGGAGGGGTCGAGGGGGAATTTAAT  50
      |||||||| | ||||||||   ||||| |||||||||||||  ||   | 
seq2  GCATACATTGCGGGGGGGGAATCTAGGAAGGGGTCGAGGGG--AT---AA  45

seq1  AAAGAACAACAAAATAGGCATCTGCTGACATGAGGGCCAAAGTCAGGCTC  100
      | |||||||| ||||| |||||||||||||||| || |||||||||||||
seq2  ATAGAACAAC-AAATA-GCATCTGCTGACATGAAGG-CAAAGTCAGGCTC  92

seq1  CAGGTGGCAGGCATTCTGT-GTCTTA-TCTCCGGAACA--TAGATCCTCC  146
      ||||||||| ||| ||||| |||||| |||||||||||   |||||||||
seq2  CAGGTGGCA-GCA-TCTGTGGTCTTATTCTCCGGAACAATAAGATCCTCC  140

seq1  TTGACAGTCTTGGGGTATCAGGTCGGGCTCAGGAGTAACTCATGT-CCTT  195
       ||||||||||||||||||||||| |||||| ||||||||||||| ||||
seq2  -TGACAGTCTTGGGGTATCAGGTC-GGCTCA-GAGTAACTCATGTCCCTT  187

seq1  GGAAGTCATGGAAGTTCAGGAAGAGATAGGGAAGAGGGGACTACTATAAT  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAAGTCATGGAAG-TCAGGAAGAGATAGGGAAGAGGGGACTACTATAAT  236

seq1  TCAGCTTTTACAGCCTCAGGTACCAGGAGTACCAGGAAGGGAACAGGGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTTACAGCCTCAGGTACCAGGAGTACCAGGAAGGGAACAGGGAG  286

seq1  GAGGGAGTGACAACTGGCTCCAAGTATG-AAGCCATTTGGCCTGTCAGGG  344
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGGGAGTGACAACTGGCTCCAAGTATGAAAGCCATTTGGCCTGTCAGGG  336

seq1  TGGGAGATTGTGAAGGGCTCACTTTCTCACGGTATGGTCTCTGACAATCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATTGTGAAGGGCTCACTTTCTCACGGTATGGTCTCTGACAATCT  386

seq1  TTAATTCTGTGCTTTCTTTATTCCTTTCTTTTTGACACAAGGGAATTAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTGTGCTTTCTTTATTCCTTTCTTTTTGACACAAGGGAATTAAG  436

seq1  TTCTCCAAAGCAATGATTCTAGATATACACACAGTGTGAGTCACTGATAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAAAGCAATGATTCTAGATATACACACAGTGTGAGTCACTGATAA  486

seq1  TTTATTAAGAAGGCGACTACGGTTTCATAACAAACTATAATGTGCACTTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAGAAGGCGACTACGGTTTCATAACAAACTATAATGTGCACTTG  536

seq1  GAAGTTTATCCCAGTTGGGCCTATTACTGGATCATGATTACCTCCTTCAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTATCCCAGTTGGGCCTATTACTGGATCATGATTACCTCCTTCAC  586

seq1  CCTAAAGCAATTTTGTAAATTGTGATCCTGTCTGGGTAGGCATGATCTGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGCAATTTTGTAAATTGTGATCCTGTCTGGGTAGGCATGATCTGC  636

seq1  ACCTGTGCTATCAGATAATTAAAGCTGTGAAGCTAAAACCATCCAGTGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCTATCAGATAATTAAAGCTGTGAAGCTAAAACCATCCAGTGGA  686

seq1  AAAAGGACAACATTTTCAACAAATGGTGCGGGCTCAACTGGTGGTTAGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAACATTTTCAACAAATGGTGCGGGCTCAACTGGTGGTTAGCA  736

seq1  TGTAGAAGGTGGCAAATCGACCCATCCTTATCTCCTTGCACAAAGCTCAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGGTGGCAAATCGACCCATCCTTATCTCCTTGCACAAAGCTCAA  786

seq1  GTCCCAGTGACTCAAGGACCTTCCCATAAAACCAGATACACTGAAACTTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTGACTCAAGGACCTTCCCATAAAACCAGATACACTGAAACTTA  836

seq1  TTTAAGAGATAGTGGAGTAGATCCTGGAAGATATGGGCACCGGGGAAAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGATAGTGGAGTAGATCCTGGAAGATATGGGCACCGGGGAAAAT  886

seq1  TTCCTGAACAGAACACCAATGGCTTGTGATGTAGATCAAGAATCAACAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAACAGAACACCAATGGCTTGTGATGTAGATCAAGAATCAACAAA  936

seq1  TGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAA  986

seq1  GAAGACAAAAAGGCCACCAACAGATTATGAAATGATCACCAATCATAAGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAAAAGGCCACCAACAGATTATGAAATGATCACCAATCATAAGT  1036

seq1  ATGACAGGGGCCTAATATCAAATATATACAAAGAAGTCAAGAAGTTAGAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGGGGCCTAATATCAAATATATACAAAGAAGTCAAGAAGTTAGAC  1086

seq1  TCCAGAGTGATTACCCTCTTATATAGTGGGGTACAGAGCTAAACAAAGAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTGATTACCCTCTTATATAGTGGGGTACAGAGCTAAACAAAGAA  1136

seq1  TTC  1147
      |||
seq2  TTC  1139