BAC Information

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BAC

Clone NameB6Ng01-206O11
Chromosome2 (Build37)
Map Location 50,410,192 - 50,572,200
singlet/doubletdoublet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206O11.bB6Ng01-206O11.g
ACCGA026198GA026199
length1,0991,133
definitionB6Ng01-206O11.b B6Ng01-206O11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,410,192 - 50,411,296)(50,571,056 - 50,572,200)
sequence
gaattccctaatgttctttaaatcaggcctgcaagctcaattgggtgtct
ctcactatcttggtcatgggagacctcagcatgctggacttctacagaat
aaaacactctttgtgctcacatacaatttgagtctggggtgtcattcttt
gacaaatcatggaccctcacactttcagtcttggtgggtttgttgttttt
aatacttaattttttgagattataattacaccatttctcccttccctttc
cgccctctaaaccctctcatatatatccccttttgttctttttcgaattc
atgacctgtttttcttcaaatatgtttattcctaaaaacatacatatcta
aatgcttgtcagtcatggtattctgtcactgcaatagaaactgtagctaa
aacatcctaaaaagaaggtttaatttttcatttatgtatttttttttaat
ttcaatgactgtttggaactggtaatttcaacactcttcagaactaatgt
tgaaatagatattgccattacttctactctcagcatatcttgctgcaaat
gagcagatattctgctcatgtttccagtagatattttaagtttattttat
taggattatttttaaaatgagttataatacagtcaaatcattttctcttt
cctacttctcccatatacccattgttttttaagttagtgacttctctttg
cattaattgtaagtatatgcatacatatgtataaatatgcacatatacat
atgcataagcttataagtatctgaatacaatctgctcagtctgtgtctta
gtctgggtttgtaatcctgcacaaaacaccatgactaagaagcaagttgg
ggaggaaaaggtttgttcagtttacacttccacattgctactcatcacca
aaggaagtcaggacaggaatcacacagggcagaacttgcagcagagctga
tgcagaggccatgggaggatgtcacttactgttttcttccctggcgttcc
cagcttgctttcttatagattctcagactactagcccagggttggttcca
ccccacaatgggctgggtcctccctcctgatactagtttgaaaaatgct

gaattccctagatttgcctctgagttcaataagtggccctgttcctggag
actgacaatgaggaattgccttcctatagccagtaggagacacctttaac
tatctttgttcttattcttaaaatgcaatcatagccagagaaaaactcat
cacattaatctctggtcatacacacttcacaaaatagcttggaaaaatta
gctggcatgttcgaggtctccgaatctcagctgtttttcattttcgacgt
caggcgattagctaagagatgaattgattgattggctttcccaccgcctc
tctattctaagcactctccaatttaagtctgaactcattccttccactta
tctgtgacaggaggaagcacaaatgccatgatgcatgctttctcctgcct
acgccaaaataagcaagaggagccgactgagaagggaagacacctgacca
ctctgcagccgtgctatttcctaagaggagttttgagttttgcaagaagg
cctcagaaggttttttttttcattctttgtccattttttaaaaagtgtta
tcactgtttccttccattgatgcatagtcctagggttcaaaagtctctga
gtcttagctaaagggaaccatttactttcagagaaaagaagagacgagat
caaaatagttccgaggcctcccgttcagagtccagagaaagaggcaggac
cggctattgtcagctgaagggacaaaccctctccagcccttgaggcatca
agggacctggcccttcaagaaatcctatcttaggtggtggtttacgaggt
ctggaaagtgacattgatggtgaatacgtttcagactgcaataggactcc
tcctacatctaggactcaatgcaggacaaagcatgtggcgtttgggattg
taacccacccctcagttactcactgtgggggaattgggttcacagtgaac
aagttcctgcatctgttatcacagagtgatgatttgattttgtttcgttg
ttgtgtcagttaagccatcctcatctcctgtctcacgtagaggtgtcgag
ggccagtggggaattcacacaaacgaagccatattcacttctaagctaat
gtttcaatgttggacctcttcatttaggtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50410192_50411296
seq2: B6Ng01-206O11.b_47_1145

seq1  GAATTCCCTAATGTTCTTTAAATCAGGCCTGCAAGCTCAATTGGGTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAATGTTCTTTAAATCAGGCCTGCAAGCTCAATTGGGTGTCT  50

seq1  CTCACTATCTTGGTCATGGGAGACCTCAGCATGCTGGACTTCTACAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATCTTGGTCATGGGAGACCTCAGCATGCTGGACTTCTACAGAAT  100

seq1  AAAACACTCTTTGTGCTCACATACAATTTGAGTCTGGGGTGTCATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTCTTTGTGCTCACATACAATTTGAGTCTGGGGTGTCATTCTTT  150

seq1  GACAAATCATGGACCCTCACACTTTCAGTCTTGGTGGGTTTGTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCATGGACCCTCACACTTTCAGTCTTGGTGGGTTTGTTGTTTTT  200

seq1  AATACTTAATTTTTTGAGATTATAATTACACCATTTCTCCCTTCCCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAATTTTTTGAGATTATAATTACACCATTTCTCCCTTCCCTTTC  250

seq1  CGCCCTCTAAACCCTCTCATATATATCCCCTTTTGTTCTTTTTCGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTCTAAACCCTCTCATATATATCCCCTTTTGTTCTTTTTCGAATTC  300

seq1  ATGACCTGTTTTTCTTCAAATATGTTTATTCCTAAAAACATACATATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGTTTTTCTTCAAATATGTTTATTCCTAAAAACATACATATCTA  350

seq1  AATGCTTGTCAGTCATGGTATTCTGTCACTGCAATAGAAACTGTAGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGTCAGTCATGGTATTCTGTCACTGCAATAGAAACTGTAGCTAA  400

seq1  AACATCCTAAAAAGAAGGTTTAATTTTTCATTTATGTATTTTTTTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTAAAAAGAAGGTTTAATTTTTCATTTATGTATTTTTTTTTAAT  450

seq1  TTCAATGACTGTTTGGAACTGGTAATTTCAACACTCTTCAGAACTAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGACTGTTTGGAACTGGTAATTTCAACACTCTTCAGAACTAATGT  500

seq1  TGAAATAGATATTGCCATTACTTCTACTCTCAGCATATCTTGCTGCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGATATTGCCATTACTTCTACTCTCAGCATATCTTGCTGCAAAT  550

seq1  GAGCAGATATTCTGCTCATGTTTCCAGTAGATATTTTAAGTTTATTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGATATTCTGCTCATGTTTCCAGTAGATATTTTAAGTTTATTTTAT  600

seq1  TAGGATTATTTTTAAAATGAGTTATAATACAGTCAAATCATTTTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTATTTTTAAAATGAGTTATAATACAGTCAAATCATTTTCTCTTT  650

seq1  CCTACTTCTCCCATATACCCATTGTTTTTTAAGTTAGTGACTTCTCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTCTCCCATATACCCATTGTTTTTTAAGTTAGTGACTTCTCTTTG  700

seq1  CATTAATTGTAAGTATATGCATACATATGTATAAATATGCACATATACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTGTAAGTATATGCATACATATGTATAAATATGCACATATACAT  750

seq1  ATGCATAAGCTTATAAGTATCTGAATACAATCTGCTCAGTCTGTGTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAGCTTATAAGTATCTGAATACAATCTGCTCAGTCTGTGTCTTA  800

seq1  GTCTGGGTTTGTAATCCTGCACAAAACACCATGACTAAGAAGCAAGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGTTTGTAATCCTGCACAAAACACCATGACTAAGAAGCAAGTTGG  850

seq1  GGAGGAAAAGGTTTGTTCAGTTTACACTTCCACATTGCTACTCATCACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAAGGTTTGTTCAGTTTACACTTCCACATTGCTACTCATCACCA  900

seq1  AAGGAAGTCAGGACAGGAATCACACAGGGCAGGAACTTGCAAGCAGGAGC  950
      ||||||||||||||||||||||||||||||| |||||||| |||| ||||
seq2  AAGGAAGTCAGGACAGGAATCACACAGGGCA-GAACTTGC-AGCA-GAGC  947

seq1  TGATGCAGAGGCCATGGAAGGATGTCACTTACTGGTTTTCTTCCCCTGGC  1000
      ||||||||||||||||| ||||||||||||||| |||||||| |||||||
seq2  TGATGCAGAGGCCATGGGAGGATGTCACTTACT-GTTTTCTT-CCCTGGC  995

seq1  GTTCCCAGCTTGCTTTCTTATAGA-TCTCAAGACTACTAGCCCAGGGTTG  1049
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  GTTCCCAGCTTGCTTTCTTATAGATTCTC-AGACTACTAGCCCAGGGTTG  1044

seq1  GTTCCA-CCCACAATGGGCTGGGTCCTCCCTCCTTGATTACTAGTTGAAA  1098
      |||||| |||||||||||||||||||||||||| ||| ||||||||  ||
seq2  GTTCCACCCCACAATGGGCTGGGTCCTCCCTCC-TGA-TACTAGTTTGAA  1092

seq1  AAATGCT  1105
      |||||||
seq2  AAATGCT  1099


seq1: chr2_50571056_50572200
seq2: B6Ng01-206O11.g_67_1199 (reverse)

seq1  CATCACCTAAATAGAAGAGTACAAACATTGAAACATTAGCTTTAGAGTTG  50
      |||||||||||| ||||||  | ||||||||||||||||| |||||  ||
seq2  CATCACCTAAAT-GAAGAGGTCCAACATTGAAACATTAGC-TTAGAAGTG  48

seq1  AAATAT-GCTTCTGTTTTTGTGTGAATTCCCCACCTGGCCCTCGGACCAA  99
       ||||| |||||    ||||||||||||||||| ||||||||| |||  |
seq2  -AATATGGCTTC---GTTTGTGTGAATTCCCCA-CTGGCCCTC-GAC--A  90

seq1  CCTCTACGTGAGACAGGGAGATGAGGATGGCTAAACTGAACACAAC-ACG  148
      ||||||||||||||| |||||||||||||||| ||||| ||||||| |||
seq2  CCTCTACGTGAGACA-GGAGATGAGGATGGCTTAACTG-ACACAACAACG  138

seq1  AAACAAAATCAAAATCATCACTCTGTGATAACAGATGCAGGAACCTTGTT  198
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  AAACAAAATC-AAATCATCACTCTGTGATAACAGATGCAGGAA-CTTGTT  186

seq1  CACTGTGAACCAAATTCCCCCACAGTGAGTAACCTGAGGGGTGGGTTACA  248
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CACTGTGAACCCAATTCCCCCACAGTGAGTAA-CTGAGGGGTGGGTTACA  235

seq1  AT-CCAAACGCCACATGCTTTGTCCTGCATTGAGTCCTAGATGTAGGAGG  297
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAACGCCACATGCTTTGTCCTGCATTGAGTCCTAGATGTAGGAGG  285

seq1  AGTCCTATTGCAGTCTGAAACGTATTCACCATCAATGTCACTTTCCAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTATTGCAGTCTGAAACGTATTCACCATCAATGTCACTTTCCAGAC  335

seq1  CTCGTAAACCACCACCTAAGATAGGATTTCTTGAAGGGCCAGGTCCCTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTAAACCACCACCTAAGATAGGATTTCTTGAAGGGCCAGGTCCCTTG  385

seq1  ATGCCTCAAGGGCTGGAGAGGGTTTGTCCCTTCAGCTGACAATAGCCGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCAAGGGCTGGAGAGGGTTTGTCCCTTCAGCTGACAATAGCCGGT  435

seq1  CCTGCCTCTTTCTCTGGACTCTGAACGGGAGGCCTCGGAACTATTTTGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTTTCTCTGGACTCTGAACGGGAGGCCTCGGAACTATTTTGAT  485

seq1  CTCGTCTCTTCTTTTCTCTGAAAGTAAATGGTTCCCTTTAGCTAAGACTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCTCTTCTTTTCTCTGAAAGTAAATGGTTCCCTTTAGCTAAGACTC  535

seq1  AGAGACTTTTGAACCCTAGGACTATGCATCAATGGAAGGAAACAGTGATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTTTGAACCCTAGGACTATGCATCAATGGAAGGAAACAGTGATA  585

seq1  ACACTTTTTAAAAAATGGACAAAGAATGAAAAAAAAAACCTTCTGAGGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTTAAAAAATGGACAAAGAATGAAAAAAAAAACCTTCTGAGGCC  635

seq1  TTCTTGCAAAACTCAAAACTCCTCTTAGGAAATAGCACGGCTGCAGAGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCAAAACTCAAAACTCCTCTTAGGAAATAGCACGGCTGCAGAGTG  685

seq1  GTCAGGTGTCTTCCCTTCTCAGTCGGCTCCTCTTGCTTATTTTGGCGTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTGTCTTCCCTTCTCAGTCGGCTCCTCTTGCTTATTTTGGCGTAG  735

seq1  GCAGGAGAAAGCATGCATCATGGCATTTGTGCTTCCTCCTGTCACAGATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGAAAGCATGCATCATGGCATTTGTGCTTCCTCCTGTCACAGATA  785

seq1  AGTGGAAGGAATGAGTTCAGACTTAAATTGGAGAGTGCTTAGAATAGAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGAATGAGTTCAGACTTAAATTGGAGAGTGCTTAGAATAGAGA  835

seq1  GGCGGTGGGAAAGCCAATCAATCAATTCATCTCTTAGCTAATCGCCTGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGTGGGAAAGCCAATCAATCAATTCATCTCTTAGCTAATCGCCTGAC  885

seq1  GTCGAAAATGAAAAACAGCTGAGATTCGGAGACCTCGAACATGCCAGCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAAATGAAAAACAGCTGAGATTCGGAGACCTCGAACATGCCAGCTA  935

seq1  ATTTTTCCAAGCTATTTTGTGAAGTGTGTATGACCAGAGATTAATGTGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCAAGCTATTTTGTGAAGTGTGTATGACCAGAGATTAATGTGAT  985

seq1  GAGTTTTTCTCTGGCTATGATTGCATTTTAAGAATAAGAACAAAGATAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTCTCTGGCTATGATTGCATTTTAAGAATAAGAACAAAGATAGT  1035

seq1  TAAAGGTGTCTCCTACTGGCTATAGGAAGGCAATTCCTCATTGTCAGTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGTCTCCTACTGGCTATAGGAAGGCAATTCCTCATTGTCAGTCT  1085

seq1  CCAGGAACAGGGCCACTTATTGAACTCAGAGGCAAATCTAGGGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAACAGGGCCACTTATTGAACTCAGAGGCAAATCTAGGGAATTC  1133


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