BAC Information

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BAC

Clone NameB6Ng01-207D03
Chromosome2 (Build37)
Map Location 135,562,057 - 135,721,644
singlet/doubletdoublet
Overlap genePlcb4
Upstream geneLOC433478, Plcb1, LOC100043487, LOC100043786, LOC100043788
Downstream gene6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207D03.bB6Ng01-207D03.g
ACCGA026415GA026416
length1,048617
definitionB6Ng01-207D03.b B6Ng01-207D03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,720,621 - 135,721,644)(135,562,057 - 135,562,670)
sequence
gaattcttgctctttcttttttgaagtagctcccattgggtcttaaatta
cccagtctctgctagagcctgggaccaatgctggctccatgcctcatctt
tatgtgcaagggacttgcagccagagagatctcatggtgagcagtgaacc
ttggaacatagcggcatgttcctggtgtctcagtatgtgccttcctgaca
ggagaaggggtgccgagtcctttagaccaccaagaccgagacaccatatg
aactgtgctagagggaaaacctaactgaatgtctgtgtcagaggaagttg
ggagagggcggcggagtcgagagatggcagcagaacattctgggccaggg
tccagcaagaacactcctaagaagaggagagaaaatacaagactggagag
agaaagagagacagagacagagagacacacacacagagacatagatgaga
cagagagatacagagagacacagagagagaacaacacacagagagacgga
atatgaaggaataaatatgaatgagaatataggcagagtgtaaatgccta
caagtcagaatgtgcttgccatgctctgtgaacagtaaaatggtgggcca
tgtggacaacttacacatcacaaaaaggacttagaaaatgatttgtaatt
aggtgtgaagtttcctgaaggtgtgatttaccttctaaaatgagccatct
ttatttgtgtcttataaaggcaaagctaggaaggcatttttcacttctat
ttttgaactaaggggacttgtgcatagtgagtttaaacatagattcaagg
tcacatcttctgcgtagcacagcttaaactaggccccgcttctgtgcatc
aataaacacacctctttacctctgtatttttaagccttgcaagaactctt
tggggaaaaaactttaattctaaattaccattttcatgtgaaaaaccctt
ttctctttttgcaaatgcctatccctgggccacctttgcttctgcttgag
cactgctcagcccagggacaccccttgaaatgttccttcccctttgga
gaattccaaacatcctcacacaggcacagaaactatctgcagctggaaaa
atcacccctgccagagcacgaggcaaacctagctgctgtggacaatctga
agcagccccatatcccacagttgggattaaagtgaaaatatattcttata
ccgtttctgtggttttaaaagaaactaaaattcaaaaattcttactacac
ttaattctgccaggaaacggcaaagaggttgatgagtgaccagaaatcca
caagttcggtttgaaggacaacagagagggcaggaggatgaaggagagga
tgggggctgttggattgcctggtggttttgagatggagtcaaacacatga
tttagcccatagcctttggaggaatgcctggacttgaggccaaagataaa
atagtaatttaacccttaacacttaccatcatttagaataatatggattg
tacatactctaaaaatattagagatatgtaagcaaactgaagacagtgtt
ttaaaaaatcattggatatttagtgggaaacatattgtgtcatcttatag
tgatgctccaaatatagtgtcatcattacgtgtaaacattttgtttttat
tttatttaatgtatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_135720621_135721644
seq2: B6Ng01-207D03.b_36_1083 (reverse)

seq1  TCCAAAGGG--AGG-ACATTTC-AGGGGTGT-CCTGGGCTG-GCAGTGCT  44
      |||||||||  ||| ||||||| |||||||| ||||||||| ||||||||
seq2  TCCAAAGGGGAAGGAACATTTCAAGGGGTGTCCCTGGGCTGAGCAGTGCT  50

seq1  C-AGCAG-AGCAAA-GTGGCC--AGGATA-GCATTTGC-AAAAGAGAAAA  87
      | ||||| |||||| ||||||   ||||| |||||||| |||||||||||
seq2  CAAGCAGAAGCAAAGGTGGCCCAGGGATAGGCATTTGCAAAAAGAGAAAA  100

seq1  GG--TTTTCACATGAAA--TGTTATTTAGAATT-AAGTTTTTT-CCCAAA  131
      ||  |||||||||||||   || |||||||||| ||||||||| ||||||
seq2  GGGTTTTTCACATGAAAATGGTAATTTAGAATTAAAGTTTTTTCCCCAAA  150

seq1  GAGTTCTTTGCAAGGCTT-AAAATACAGA-GTTAAGAGGTGTGTTTATTG  179
      |||||| ||||||||||| |||||||||| || |||||||||||||||||
seq2  GAGTTC-TTGCAAGGCTTAAAAATACAGAGGTAAAGAGGTGTGTTTATTG  199

seq1  ATGCACAGAAGCGGGGCCTAGTTT-AGCTGTGCTACGCAG-AGATGTGAC  227
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  ATGCACAGAAGCGGGGCCTAGTTTAAGCTGTGCTACGCAGAAGATGTGAC  249

seq1  CTTGAATCTATG-TTAAACTCACTATGCACAAGTCCCCTTAGTTCAAAAA  276
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCTATGTTTAAACTCACTATGCACAAGTCCCCTTAGTTCAAAAA  299

seq1  TAGAAGTGAAAAATGCCTTCCTAGCTTTGCCTTTATAAGACACAAATAAA  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGAAAAATGCCTTCCTAGCTTTGCCTTTATAAGACACAAATAAA  349

seq1  GATGGCTCATTTTAGAAGGTAAATCACACCTTCAGG-AACTTCACACCTA  375
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATGGCTCATTTTAGAAGGTAAATCACACCTTCAGGAAACTTCACACCTA  399

seq1  ATTACAAATCATTTTCTAAGTCCTTTTTGTGATGTGTAAGTTGTCCACAT  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATCATTTTCTAAGTCCTTTTTGTGATGTGTAAGTTGTCCACAT  449

seq1  GGCCCACCATTTTACTGTTCACAGAGCATGGCAAGCACATTCTGACTTGT  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACCATTTTACTGTTCACAGAGCATGGCAAGCACATTCTGACTTGT  499

seq1  AGGCATTTACACTCTGCCTATATTCTCATTCATATTTATTCCTTCATATT  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTACACTCTGCCTATATTCTCATTCATATTTATTCCTTCATATT  549

seq1  CCGTCTCTCTGTGTGTTGTTCTCTCTCTGTGTCTCTCTGTATCTCTCTGT  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTCTCTGTGTGTTGTTCTCTCTCTGTGTCTCTCTGTATCTCTCTGT  599

seq1  CTCATCTATGTCTCTGTGTGTGTGTCTCTCTGTCTCTGTCTCTCTTTCTC  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTATGTCTCTGTGTGTGTGTCTCTCTGTCTCTGTCTCTCTTTCTC  649

seq1  TCTCCAGTCTTGTATTTTCTCTCCTCTTCTTAGGAGTGTTCTTGCTGGAC  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGTCTTGTATTTTCTCTCCTCTTCTTAGGAGTGTTCTTGCTGGAC  699

seq1  CCTGGCCCAGAATGTTCTGCTGCCATCTCTCGACTCCGCCGCCCTCTCCC  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCCAGAATGTTCTGCTGCCATCTCTCGACTCCGCCGCCCTCTCCC  749

seq1  AACTTCCTCTGACACAGACATTCAGTTAGGTTTTCCCTCTAGCACAGTTC  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTCTGACACAGACATTCAGTTAGGTTTTCCCTCTAGCACAGTTC  799

seq1  ATATGGTGTCTCGGTCTTGGTGGTCTAAAGGACTCGGCACCCCTTCTCCT  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTGTCTCGGTCTTGGTGGTCTAAAGGACTCGGCACCCCTTCTCCT  849

seq1  GTCAGGAAGGCACATACTGAGACACCAGGAACATGCCGCTATGTTCCAAG  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAGGCACATACTGAGACACCAGGAACATGCCGCTATGTTCCAAG  899

seq1  GTTCACTGCTCACCATGAGATCTCTCTGGCTGCAAGTCCCTTGCACATAA  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGCTCACCATGAGATCTCTCTGGCTGCAAGTCCCTTGCACATAA  949

seq1  AGATGAGGCATGGAGCCAGCATTGGTCCCAGGCTCTAGCAGAGACTGGGT  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGCATGGAGCCAGCATTGGTCCCAGGCTCTAGCAGAGACTGGGT  999

seq1  AATTTAAGACCCAATGGGAGCTACTTCAAAAAAGAAAGAGCAAGAATTC  1024
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGACCCAATGGGAGCTACTTCAAAAAAGAAAGAGCAAGAATTC  1048

seq1: chr2_135562057_135562670
seq2: B6Ng01-207D03.g_70_685

seq1  GAATTCCAAACATCCTCACACAGGCACAGAAACTATCTGCAGCTGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACATCCTCACACAGGCACAGAAACTATCTGCAGCTGGAAAA  50

seq1  ATCACCCCTGCCAGAGCACGAGGCAAACCTAGCTGCTGTGGACAATCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCCTGCCAGAGCACGAGGCAAACCTAGCTGCTGTGGACAATCTGA  100

seq1  AGCAGCCCCATATCCCACAGTTGGGATTAAAGTGAAAATATATTCTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCCCATATCCCACAGTTGGGATTAAAGTGAAAATATATTCTTATA  150

seq1  CCGTTTCTGTGGTTTTAAAAGAAACTAAAATTCAAAAATTCTTACTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTCTGTGGTTTTAAAAGAAACTAAAATTCAAAAATTCTTACTACAC  200

seq1  TTAATTCTGCCAGGAAACGGCAAAGAGGTTGATGAGTGACCAGAAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTGCCAGGAAACGGCAAAGAGGTTGATGAGTGACCAGAAATCCA  250

seq1  CAAGTTCGGTTTGAAGGACAACAGAGAGGGCAGGAGGATGAAGGAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCGGTTTGAAGGACAACAGAGAGGGCAGGAGGATGAAGGAGAGGA  300

seq1  TGGGGGCTGTTGGATTGCCTGGTGGTTTTGAGATGGAGTCAAACACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTGTTGGATTGCCTGGTGGTTTTGAGATGGAGTCAAACACATGA  350

seq1  TTTAGCCCATAGCCTTTGGAGGAATGCCTGGACTTGAGGCCAAAGATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCATAGCCTTTGGAGGAATGCCTGGACTTGAGGCCAAAGATAAA  400

seq1  ATAGTAATTTAACCCTTAACACTTACCATCATTTAGAATAATATGGATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATTTAACCCTTAACACTTACCATCATTTAGAATAATATGGATTG  450

seq1  TACATACTCTAAAAATATTAGAGATATGTAAGCAAACTGAAGACAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTCTAAAAATATTAGAGATATGTAAGCAAACTGAAGACAGTGTT  500

seq1  TTAAAAAATCATTGGATATTTAGTGGGAAACATATTGTGTCATCTTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATCATTGGATATTTAGTGGGAAACATATTGTGTCATCTTATAG  550

seq1  TGATGCTCCAAATATAGTGTCATCATTACGTGT-AACA-TTTGTTTTTAT  598
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  TGATGCTCCAAATATAGTGTCATCATTACGTGTAAACATTTTGTTTTTAT  600

seq1  TTTATTTAATGTATAT  614
      ||||||||||||||||
seq2  TTTATTTAATGTATAT  616