BAC Information

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BAC

Clone NameB6Ng01-207D04
Chromosome2 (Build37)
Map Location 155,359,353 - 155,479,949
singlet/doubletdoublet
Overlap geneAcss2, Gss, Myh7b, Trpc4ap
Upstream geneCbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3
Downstream geneEdem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207D04.bB6Ng01-207D04.g
ACCGA026417GA026418
length1,1701,101
definitionB6Ng01-207D04.b B6Ng01-207D04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,478,777 - 155,479,949)(155,359,353 - 155,360,441)
sequence
gaattcactctgtagatcaggctggccttgaattcatagagatctgccac
cctctgtctccagagtgctgagatttgtaccaccatgcctggttacttat
tattttttatattttatgtatatgggtgttttcctgcatgtgtgtctgtg
taccacgtgagtgtttggtgccaaggaggccagaagagggcatcctgtcc
cctggaactggagtcacagacagttgaaggccactatgtggtgctgggaa
ttgaaccccagtcccctgaaaaagcaaactctctaaacctctgagccagc
tctagctgcggtgacagcagtctttcttagcgagatgtgatagcgcatgt
ctgttttcctagcacttgggaggtagaagccagagggtcaggaattcaag
gccagtctaggcctcagagaccctgtctcaatggcagaaaaccctaacaa
aaggaaaaagggaccatccccgtcgctcgttgtacagggttgcagtgctg
ttgtgtacattccttctctctctctctctctgcagctgctcttctcagca
tccctggctttgtggaacggctttgcaaactggcaactaggaaagtgtca
gagtcaacgggcacagccagcttccttcaagaactggaggagtggtacac
atggctcgacaatgcgttggtgctagatgccctgatgcgagtggccaatg
aggagtctgaacacaatcaaggtactttctatagggcccctgagtggtga
gttttttctgggccccttggagatgatgtttgatctcctttttgtggaaa
attgagagttacttacagtagaattttccttagtgcagtcctacactggg
atgctattaaaacgttaataagttctccttgtttcataaaaagaagaaat
aaaggagtctgaattgtattaataaagagattgaataaaggatgcaaagc
tactcaaaataaccctatagcacgtggcttccctggtgatttctgccaca
catttacaggaaatcccactgatgctttgtaagcttctgtagagcaaaca
tttctaactcatttttgagacatgttacgtttatacaaaaccagatgaat
agaatcaagaaaaaggaaacttacagacctaaatatcctacgatcgaaat
aaaacgtttccttaaaagat
gaattctaattttagagattttctaatagatcagtgttaggaaagattac
atacagaaactgaggaactagaattttaatctcttaacattttctggcta
agcgttggtggtgcagcagtcctagcatttaggaggcagaagcagacaaa
tctctgtgagtttggattcttttaaccacacagttctcagggctttaaca
cataagagtcttccttaacctttccctgctgactttggaaatctctccct
gtggaaaaggccgtgttatttagaaggaaaatgtcttgaatagataggca
tttagaatatccagctgctgtgtccaatgtgacgactactaagcacaagt
taattatatttaaagtaagactaaataaatgaaattttctatttttaagt
gtttactagtcatacatggctaatggctactaggttggatagcaccactt
tagaatgatgtaatgtgctagggaaccccaaggccatcacttcctattcc
tgtgccttagggttctcatatgtaagaagaatggtggatatcaaaagctc
cattctttaactttttgaatggtttataattcaattttggagctaggcct
ccctccaccttttagtctttctgctacagttagagcagaagtacacccag
gggacactaggctgctaatttgtcaaatgatgttgtttctacttcctact
cccttggtgggagggaaaagtgacctgagggtatgcttacatcagagatc
cttaaagtgtgcaacactgtatgggtcatagaacgctttcaagttatact
tttgaaatatatttcttttactttttttgttgttgttttgctttgttttc
caagacagagtttttctgtatggtagcttttgctgtcctgggaactcact
ctgaagaccaggctggctttaactcacagagactgccctgcttcttgacc
tcctgaagaactgggattaccaccatgcctggcgtgaagtacctcttctg
tccgggcatgtaatggtatgcaatacaatctccataaactccaaaggttg
gggggagctttgggtttacataatggatgagacctggtctcaaaagacca
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155478777_155479949
seq2: B6Ng01-207D04.b_31_1200 (reverse)

seq1  ATCTTTTAA-GAAATTTTTTATATCTAATTTGTAAGATATT--AGTCTGT  47
      ||||||||| ||||  |||||| || |  | ||| ||||||   ||||||
seq2  ATCTTTTAAGGAAACGTTTTATTTCGA--TCGTAGGATATTTAGGTCTGT  48

seq1  AATTTTCTTTTCTTGTGA-TCTATTCATCTGGTTTTGGTATAAACGTAAA  96
      || |||| ||| |  ||| ||||||||||||||||| |||||||||| ||
seq2  AAGTTTCCTTTTTCTTGATTCTATTCATCTGGTTTT-GTATAAACGT-AA  96

seq1  CATTGTCTCAAAAAATGAGTTAAGAAATGTTTGCTCTACAGAAGGCTTAC  146
      || |||||| ||||||||||| ||||||||||||||||||||| ||||||
seq2  CA-TGTCTC-AAAAATGAGTT-AGAAATGTTTGCTCTACAGAA-GCTTAC  142

seq1  AAAGCATCAGTGGGATTTCCTGTAAATGTGTGGCAGAAATCACCAGGGAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCAGTGGGATTTCCTGTAAATGTGTGGCAGAAATCACCAGGGAA  192

seq1  GCCACGTGCTATAGGTTTATTTTGAGTAGCTTTTGCATCC-TTATTCAAT  245
      ||||||||||||||| |||||||||||||| ||||||||| |||||||||
seq2  GCCACGTGCTATAGGGTTATTTTGAGTAGC-TTTGCATCCTTTATTCAAT  241

seq1  CTCTTTATT-ATACAATTCAGACTCCTTTATTTCTTCTTTTTATGAAACA  294
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTAATACAATTCAGACTCCTTTATTTCTTCTTTTTATGAAACA  291

seq1  AGGAGAACTTATTAACGTTTTAATAGCATCCCAGTGTAGGACTGCACTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACTTATTAACGTTTTAATAGCATCCCAGTGTAGGACTGCACTAA  341

seq1  GGAAAATTCTACTGTAAGTAACTCTCAATTTTCCACAAAAAGGAGATCAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTCTACTGTAAGTAACTCTCAATTTTCCACAAAAAGGAGATCAA  391

seq1  ACATCATCTCCAAGGGGCCCAGAAAAAACTCACCACTCAGGGGCCCTATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCTCCAAGGGGCCCAGAAAAAACTCACCACTCAGGGGCCCTATA  441

seq1  GAAAGTACCTTGATTGTGTTCAGACTCCTCATTGGCCACTCGCATCAGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTACCTTGATTGTGTTCAGACTCCTCATTGGCCACTCGCATCAGGG  491

seq1  CATCTAGCACCAACGCATTGTCGAGCCATGTGTACCACTCCTCCAGTTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGCACCAACGCATTGTCGAGCCATGTGTACCACTCCTCCAGTTCT  541

seq1  TGAAGGAAGCTGGCTGTGCCCGTTGACTCTGACACTTTCCTAGTTGCCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAGCTGGCTGTGCCCGTTGACTCTGACACTTTCCTAGTTGCCAG  591

seq1  TTTGCAAAGCCGTTCCACAAAGCCAGGGATGCTGAGAAGAGCAGCTGCAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAGCCGTTCCACAAAGCCAGGGATGCTGAGAAGAGCAGCTGCAG  641

seq1  AGAGAGAGAGAGAGAAGGAATGTACACAACAGCACTGCAACCCTGTACAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAAGGAATGTACACAACAGCACTGCAACCCTGTACAA  691

seq1  CGAGCGACGGGGATGGTCCCTTTTTCCTTTTGTTAGGGTTTTCTGCCATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCGACGGGGATGGTCCCTTTTTCCTTTTGTTAGGGTTTTCTGCCATT  741

seq1  GAGACAGGGTCTCTGAGGCCTAGACTGGCCTTGAATTCCTGACCCTCTGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGTCTCTGAGGCCTAGACTGGCCTTGAATTCCTGACCCTCTGG  791

seq1  CTTCTACCTCCCAAGTGCTAGGAAAACAGACATGCGCTATCACATCTCGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCTCCCAAGTGCTAGGAAAACAGACATGCGCTATCACATCTCGC  841

seq1  TAAGAAAGACTGCTGTCACCGCAGCTAGAGCTGGCTCAGAGGTTTAGAGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGACTGCTGTCACCGCAGCTAGAGCTGGCTCAGAGGTTTAGAGA  891

seq1  GTTTGCTTTTTCAGGGGACTGGGGTTCAATTCCCAGCACCACATAGTGGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTTTCAGGGGACTGGGGTTCAATTCCCAGCACCACATAGTGGC  941

seq1  CTTCAACTGTCTGTGACTCCAGTTCCAGGGGACAGGATGCCCTCTTCTGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTGTCTGTGACTCCAGTTCCAGGGGACAGGATGCCCTCTTCTGG  991

seq1  CCTCCTTGGCACCAAACACTCACGTGGTACACAGACACACATGCAGGAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGGCACCAAACACTCACGTGGTACACAGACACACATGCAGGAAA  1041

seq1  ACACCCATATACATAAAATATAAAAAATAATAAGTAACCAGGCATGGTGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATATACATAAAATATAAAAAATAATAAGTAACCAGGCATGGTGG  1091

seq1  TACAAATCTCAGCACTCTGGAGACAGAGGGTGGCAGATCTCTATGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCTCAGCACTCTGGAGACAGAGGGTGGCAGATCTCTATGAATTC  1141

seq1  AAGGCCAGCCTGATCTACAGAGTGAATTC  1173
      |||||||||||||||||||||||||||||
seq2  AAGGCCAGCCTGATCTACAGAGTGAATTC  1170

seq1: chr2_155359353_155360441
seq2: B6Ng01-207D04.g_63_1163

seq1  GAATTCTAATTTTAGAGATTTTCTAATAGATCAGTGTTAGGAAAGATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTTTAGAGATTTTCTAATAGATCAGTGTTAGGAAAGATTAC  50

seq1  ATACAGAAACTGAGGAACTAGAATTTTAATCTCTTAACATTTTCTGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAACTGAGGAACTAGAATTTTAATCTCTTAACATTTTCTGGCTA  100

seq1  AGCGTTGGTGGTGCAGCAGTCCTAGCATTTAGGAGGCAGAAGCAGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTGGTGGTGCAGCAGTCCTAGCATTTAGGAGGCAGAAGCAGACAAA  150

seq1  TCTCTGTGAGTTTGGATTCTTTTAACCACACAGTTCTCAGGGCTTTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGAGTTTGGATTCTTTTAACCACACAGTTCTCAGGGCTTTAACA  200

seq1  CATAAGAGTCTTCCTTAACCTTTCCCTGCTGACTTTGGAAATCTCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAGTCTTCCTTAACCTTTCCCTGCTGACTTTGGAAATCTCTCCCT  250

seq1  GTGGAAAAGGCCGTGTTATTTAGAAGGAAAATGTCTTGAATAGATAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAGGCCGTGTTATTTAGAAGGAAAATGTCTTGAATAGATAGGCA  300

seq1  TTTAGAATATCCAGCTGCTGTGTCCAATGTGACGACTACTAAGCACAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATATCCAGCTGCTGTGTCCAATGTGACGACTACTAAGCACAAGT  350

seq1  TAATTATATTTAAAGTAAGACTAAATAAATGAAATTTTCTATTTTTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATTTAAAGTAAGACTAAATAAATGAAATTTTCTATTTTTAAGT  400

seq1  GTTTACTAGTCATACATGGCTAATGGCTACTAGGTTGGATAGCACCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTAGTCATACATGGCTAATGGCTACTAGGTTGGATAGCACCACTT  450

seq1  TAGAATGATGTAATGTGCTAGGGAACCCCAAGGCCATCACTTCCTATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGATGTAATGTGCTAGGGAACCCCAAGGCCATCACTTCCTATTCC  500

seq1  TGTGCCTTAGGGTTCTCATATGTAAGAAGAATGGTGGATATCAAAAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTAGGGTTCTCATATGTAAGAAGAATGGTGGATATCAAAAGCTC  550

seq1  CATTCTTTAACTTTTTGAATGGTTTATAATTCAATTTTGGAGCTAGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTAACTTTTTGAATGGTTTATAATTCAATTTTGGAGCTAGGCCT  600

seq1  CCCTCCACCTTTTAGTCTTTCTGCTACAGTTAGAGCAGAAGTACACCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACCTTTTAGTCTTTCTGCTACAGTTAGAGCAGAAGTACACCCAG  650

seq1  GGGACACTAGGCTGCTAATTTGTCAAATGATGTTGTTTCTACTTCCTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTAGGCTGCTAATTTGTCAAATGATGTTGTTTCTACTTCCTACT  700

seq1  CCCTTGGTGGGAGGGAAAAGTGACCTGAGGGTATGCTTACATCAGAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTGGGAGGGAAAAGTGACCTGAGGGTATGCTTACATCAGAGATC  750

seq1  CTTAAAGTGTGCAACACTGTATGGGTCATAGAACGCTTTCAAGTTATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTGTGCAACACTGTATGGGTCATAGAACGCTTTCAAGTTATACT  800

seq1  TTTGAAATATATTTCTTTTACTTTTTTTGTTGTTGTTTTGCTTTGTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATATATTTCTTTTACTTTTTTTGTTGTTGTTTTGCTTTGTTTTC  850

seq1  CAAGACAGAGTTTTTCTGTATGGTAGCTTTTGCTGTCCT-GGAACTCACT  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAAGACAGAGTTTTTCTGTATGGTAGCTTTTGCTGTCCTGGGAACTCACT  900

seq1  CTGAAGACCAGGCTGGCTTTTAACTCACAGAGACTG-CCTGCTTC-TGA-  946
      ||||||||||||||||| |||||||||||||||||| |||||||| ||| 
seq2  CTGAAGACCAGGCTGGC-TTTAACTCACAGAGACTGCCCTGCTTCTTGAC  949

seq1  CTCCTG-AGAACTGGGATTACCACCATGCCTGGCGTGAAGTA-CTCTTCT  994
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCCTGAAGAACTGGGATTACCACCATGCCTGGCGTGAAGTACCTCTTCT  999

seq1  GT-CGGGCATGTAATGGTATGC-ATACAATCT-CATAAACTCC-AAGGTT  1040
      || ||||||||||||||||||| ||||||||| |||||||||| ||||||
seq2  GTCCGGGCATGTAATGGTATGCAATACAATCTCCATAAACTCCAAAGGTT  1049

seq1  -GGGGGAGCTT--GGGTTACATAATGAATGAGACCTGGTCTCAAAAGACC  1087
       ||||||||||  || |||||||||| |||||||||||||||||||||||
seq2  GGGGGGAGCTTTGGGTTTACATAATGGATGAGACCTGGTCTCAAAAGACC  1099

seq1  AA  1089
      ||
seq2  AA  1101