BAC Information

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BAC

Clone NameB6Ng01-207L22
Chromosome2 (Build37)6 (Build37)
Map Location 88,343,558 - 88,344,722130,816,385 - 130,816,760
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1
Downstream geneOlfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207L22.bB6Ng01-207L22.g
ACCGA026811GA026812
length1,159553
definitionB6Ng01-207L22.b B6Ng01-207L22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(88,343,558 - 88,344,722)(130,816,385 - 130,816,760)
sequence
gaattctatcttgacttttaggaagataattaatgttcaaagattggcta
tgatttatacccaaatgaaattttagatattcatgtttttcttgtgattc
tttcctgatgaataattaattatgaaaatgttttatggaaagcaatagtt
ggccacaatatatcaatgcaaatgtccatgtgactctcagcagactggaa
attctctagaaagaactaaagagtaaatagccccggcatttgaaagaaaa
taaaaaactcccatatttgaaataaaatgttctgcccatacagtgtaagg
ccgcccttagatacgatggaatgccttttcttttatgtctattgaaagaa
aagaatcactatcctcatgtcaaattgacccacggttgaaacttatttcc
tgacattgagttcaactgtttcctgtagtgtattttagcatgtaatgtgg
acaagttctaaatgtcattttcttctcagttgaaaaacaattttcataaa
acttttcaagtatttctcggtattatacctatgcatctttatactcattg
ttctatataaagtcatgagtaattaagcaactaagtactactatgattgt
ttggatctttgtgaacaagatcagaatggttttaattatctttcaattaa
aatgtaaatattgggaagcatcttaaaataagatccataacatcatattt
gtttatatatgtaggcattaatagtttaatggtcaacccaacaaagagaa
tgatattagctaattcttacagagtaaatattttctgcttcattttataa
atttaaatatcctgtcaatttgcttactactttaagcaaatagaattaaa
atgaacttttatggctgggtatggtgtctcatgcctttgctaacatcact
caggagaccaaggcaagaggatatctatgtgtttggggcctgcttggtgt
ataaaaaatttttattacatccagaattataaatacaacacaaatacaag
actaattaatttttaattatagtgtgattttttttttcaatatgtcttca
gggatatcatttagcaccatatgtctaatatattcatggtgtgtctggtt
attacggaaatattctacacatagccatgttgaaccgacaacatatttat
ccttagcat
gaattctttgaaaataatggcccaggatccccaaacttgtgggatgcaat
gtaagggatgcgaagagcaaaattcatagcactaagtgccttcttgagaa
attggagaaaccctcaacgacttaactccacacctgaaagctctagagga
aagagaagcaaatactcacaggagtagaccgaaggcaatagccaaactca
gggctgaaatcaaccaactagaaacaaataaaaagataaaagaatctgct
gaactagcagctgtttcttgagaaaatcaagatacaaatacctttaaccg
aactagctaaagagcacagagacaatatcccaaagcaaaatcaaaaatga
aaagctagacaaaacaacagaaactgatgaaattcacaaaattatcttac
cttactaaaaaaactatacttgacaaaattggagaatatatatatatacg
tgcgtacctacatacacacacacacacacacacacacacacacacacaca
cacacacacatatatatatatatatatatatatatatatatatatatata
tat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88343558_88344722
seq2: B6Ng01-207L22.b_41_1199 (reverse)

seq1  ATGCTAGGGTATAAATATGTTGTCTGTGTCAACCATGGCTATGTGTAGAT  50
      |||||| || |||||||||||||| || |||| |||||||||||||||| 
seq2  ATGCTAAGG-ATAAATATGTTGTCGGT-TCAA-CATGGCTATGTGTAGAA  47

seq1  TTATTTTCACTAATAAAACAGACACA-CATGAATTATA-TAGACATATGG  98
      |   ||||  |||| || |||||||| |||||| |||| |||||||||||
seq2  T--ATTTCCGTAAT-AACCAGACACACCATGAA-TATATTAGACATATGG  93

seq1  TGCTAAATGATATCCTTGAAGACATATT-TGAAAAAAAATCACACTATTA  147
      ||||||||||||||| ||||||||||||   |||||||||||||||| ||
seq2  TGCTAAATGATATCCCTGAAGACATATTGAAAAAAAAAATCACACTA-TA  142

seq1  ATTAAAAATTAA-TAGTTTTGTATTTGTGTTTGTATTTTATAATTCTGGA  196
      |||||||||||| |||| ||||||||||| ||||| ||||||||||||||
seq2  ATTAAAAATTAATTAGTCTTGTATTTGTG-TTGTA-TTTATAATTCTGGA  190

seq1  TGTAATAAAAATTTTTTATACACCAAGCAGGCCCCAAACACATAGATATC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAAAATTTTTTATACACCAAGCAGGCCCCAAACACATAGATATC  240

seq1  CTCTTGCCTTGGTCTCCTGAGTGATGTTAGCAAAGGCATGAGACACCATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCCTTGGTCTCCTGAGTGATGTTAGCAAAGGCATGAGACACCATA  290

seq1  CCCAGCCATAAAAGTTCATTTTAATTCTATTTGCTTAAAGTAGTAAGCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCATAAAAGTTCATTTTAATTCTATTTGCTTAAAGTAGTAAGCAA  340

seq1  ATTGACAGGATATTTAAATTTATAAAATGAAGCAGAAAATATTTACTCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAGGATATTTAAATTTATAAAATGAAGCAGAAAATATTTACTCTG  390

seq1  TAAGAATTAGCTAATATCATTCTCTTTGTTGGGTTGACCATTAAACTATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTAGCTAATATCATTCTCTTTGTTGGGTTGACCATTAAACTATT  440

seq1  AATGCCTACATATATAAACAAATATGATGTTATGGATCTTATTTTAAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTACATATATAAACAAATATGATGTTATGGATCTTATTTTAAGAT  490

seq1  GCTTCCCAATATTTACATTTTAATTGAAAGATAATTAAAACCATTCTGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCAATATTTACATTTTAATTGAAAGATAATTAAAACCATTCTGAT  540

seq1  CTTGTTCACAAAGATCCAAACAATCATAGTAGTACTTAGTTGCTTAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCACAAAGATCCAAACAATCATAGTAGTACTTAGTTGCTTAATTA  590

seq1  CTCATGACTTTATATAGAACAATGAGTATAAAGATGCATAGGTATAATAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACTTTATATAGAACAATGAGTATAAAGATGCATAGGTATAATAC  640

seq1  CGAGAAATACTTGAAAAGTTTTATGAAAATTGTTTTTCAACTGAGAAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAATACTTGAAAAGTTTTATGAAAATTGTTTTTCAACTGAGAAGAA  690

seq1  AATGACATTTAGAACTTGTCCACATTTTCTGCTAAAATACACTACAGGAA  746
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  AATGACATTTAGAACTTGTCCACATTACATGCTAAAATACACTACAGGAA  740

seq1  ACAGTTGAACTCAATGTCATGAAATAAGTTTCAACCGTGGGTCAATTTGA  796
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACAGTTGAACTCAATGTCAGGAAATAAGTTTCAACCGTGGGTCAATTTGA  790

seq1  CATGAGGATAGTGACTCTTTTCCTCCAATAGACATAAAAGAAACTGCATT  846
      |||||||||||||| ||||||| | ||||||||||||||||||  |||||
seq2  CATGAGGATAGTGATTCTTTTCTTTCAATAGACATAAAAGAAAAGGCATT  840

seq1  CCCTCCTATCTAACTGCTGCCTTACACTGTATGTGCAGAACATTTTCTTT  896
      || || |||||||  || ||||||||||||||| |||||||||||| |||
seq2  CCATCGTATCTAAGGGCGGCCTTACACTGTATGGGCAGAACATTTTATTT  890

seq1  CACTTATTGGTGTCTTATATTTTTTTACAAATGCTGTGGCTATTTACTCT  946
      ||  ||| || || || |||||| || ||||||| | |||||||||||||
seq2  CAAATATGGGAGTTTTTTATTTTCTTTCAAATGCCGGGGCTATTTACTCT  940

seq1  TTTGTTCTTTCTAGAGAATTTCCAGTCTGCTGAGAGTCATATGGACATTT  996
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTAGTTCTTTCTAGAGAATTTCCAGTCTGCTGAGAGTCACATGGACATTT  990

seq1  GCATTGATATATTGTGGCCAACTATTGCTTTCCATAAAACATTTCTATAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  GCATTGATATATTGTGGCCAACTATTGCTTTCCATAAAACATTTTCATAA  1040

seq1  TTAATTATTCATCATGAAAGAATCACAAGAAAAACATGAATATCTAAAAT  1096
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAATTATTCATCAGGAAAGAATCACAAGAAAAACATGAATATCTAAAAT  1090

seq1  TTCATCTGGGTATAAATCATCTGCAATCTCTGAACATTAACTATCTTCCT  1146
      ||||| ||||||||||||||   |||||| |||||||||| |||||||||
seq2  TTCATTTGGGTATAAATCATAGCCAATCTTTGAACATTAATTATCTTCCT  1140

seq1  AAAAGTCAAGATAGAATTC  1165
      |||||||||||||||||||
seq2  AAAAGTCAAGATAGAATTC  1159

seq1: chr6_130816385_130816760
seq2: B6Ng01-207L22.g_401_576

seq1  AAAATCAAAAATGAAATGGAAAAAAAAAATGACCCCTTCAAAAAAAGCCC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TAGACTCTCCAATGACTTTAAGAAGTCATACTGTTTCAGTAATTAAACCA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GATATAACCAAAGCAATTGATTGAAAATGCTGCACGTAAATGGGAAAATA  150
                                                  ||||| 
seq2  --------------------------------------------AAAAT-  5

seq1  CATTCAATTTTGCAAGACTGAAAA-CTAGCAAATAAACAATGGAAATCTA  199
                  ||| | |||||| ||||  |  ||||||  ||||   |
seq2  ------------CAAAAATGAAAAGCTAG--ACAAAACAACAGAAACTGA  41

seq1  TGTGCAGAATTCTCAGAAAGTAAC--ACATGACACAGATGTGTAGCACTC  247
      ||     ||||| || ||| || |  || | ||  | |        |  |
seq2  TG----AAATTCACA-AAATTATCTTACCTTACTAAAA--------AAAC  78

seq1  ATTGGTATACATTCAATGTACAAAGGACTCACAATTTTACTCCATAGATA  297
           |||||      |  |||||  | |    | | ||    ||| |||
seq2  -----TATAC------TTGACAAA--ATTGGAGAATATA---TATATATA  112

seq1  CTTGCTCTACCCTGAAAATCACTGCTCTATTCACACACACACACACACAC  347
      | |||  |||              ||  || |||||||||||||||||||
seq2  CGTGC-GTAC--------------CTACATACACACACACACACACACAC  147

seq1  ACACACACACACACACACACACACACATA  376
      |||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACATA  176