BAC Information

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BAC

Clone NameB6Ng01-208N20
Chromosome2 (Build37)
Map Location 116,936,236 - 116,937,395
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621
Downstream geneSpred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208N20.bB6Ng01-208N20.g
ACCGA027631GA027632
length1,1981,153
definitionB6Ng01-208N20.b B6Ng01-208N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacagggcaggaacctgaaggcagcatctgatgcaggaaccat
ggatgagtgctgcttactggcttaattcccatggtttgttcagtctgctt
tcttatagaacccaggaccaccagcccagggatgtaactatccacaatgg
gccaggaccaccccatcaatcactaattaagaaaatgcctcacagctgga
tcttaggaaggccacaccaccatcgaggttacctccattcagattactcc
agtttatgtgtcaagttaacatacagtgagccagcccaactgaccctttg
tcaactctacacacaaacacatcattaatccatacatttcttttcttatt
ttatccccaagatcttgcattataaagataaatgatttttaaagtcccac
agtctttacaaattcaaacacattaattccagtctctttaaaatacccaa
tctctctaaaaatctcttttaaaagctcttgaagcctttcagctgtgggc
tcctgtaaaactcaaaattaaattaaatactctttcttacagagattaaa
aaccagggcccagtcagaatctgaaccaagcaaaaccaaattccaatggc
ataactaactctatgtccaattacctgggagtcactcttgatcttctgtg
ttctgtcaggcagcttgagttactccttcagctctgccctctgcagcaca
cacagcctgtcttctaggctcccgtggctccactactattgttcttggtg
gtcctcccagggtactagagtcttctgctgcagccagacttctctctctc
tctctctctctgatatcctctcataggctctcttcatggtgccaaggctc
aacttgtctgcatgaccccttcagtcctgggccttcaactgtcactgagg
ctgtaccttcacaatggcctctctgcaccactcacaatgccaagccttgg
ttgttttccatgacccctccatgcctttaaaccaggactccccgggtgac
tcttgaacactcccaagttcagctgccagctcgagctacaccttctgctg
ctctgaacacagcttgtgtgacctgaccctggacaaccttctagagcttc
acccaagtgatgctgtctcttccatcaccactaatttccacttcagtaac
gacctagtgttctagcagcagatcacatacaggtttgccttggtctca

gaattcactatgtagcctaggcagacctcaaacacacagcaagcctgctg
ctccagcttcaccaatgctggggttatagacatctgccgtcacaccacgt
tgcctcattagaatagtttttctgctcttcagtcctatagtgtaactatg
gaaacaggaaactaaagggaaggccaggcaaaatggctcagtgagtaaag
gagcttgcctccaaacctgatgatctgaatcccatccctgagactcgcac
gctggaaggggagaactccctggagttgtcctctaactgccacatgcatt
cccccaaccccaacagacacaaataaatgaacatttcaaagaaaagattt
gggtagtaaagatgttattcaaaagaaataactttttctcaaataatttc
tagctcttctttcacctgtatcaattaaatgtatatattctgaaattgaa
ttacaattgcatatatatatatcttgtctaccaggtaaagagatgttaca
tatagcttgtatgttgcacacaaatgaagagtgtttaagatttttaaaaa
gtttaatagtcaacttgacaattagaacaaaatggagaattgtaagaaac
tccaaaacagttgtgttagaagtattgagcttttacacaaacccagacag
gagtgaacaagttaaattctaaggtaacattacagagggagctggacaaa
aaagaatggattgtttgtttttggaagtcagatatgttttaaagaaaaga
aggaagaagggactatattaactctattacctattattaagtgaggagaa
aaaccagaccacagttacttagggaaggaaaaaatatttcttttttttaa
ttgggtatttatttcatttacatttccaatgctatcccaaaagttcctcc
acaatgctcccccacccaattcccttcaccctcccacttcccacttctta
gccctggcgttcccttgtactggaggcatttaaaaggtttgcaacgaatc
atggggcctcctctttccactgatggccgactaggccattcttctgataa
catatgcagctaagagaccgagctccggggtactgtagttcaatgtgtca
ctatggttgcagatccattagtctggtaccttcctagctctcaattgggg
gcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116936236_116937395
seq2: B6Ng01-208N20.g_67_1219

seq1  GAATTCACTATGTAGCCTAGGCAGACCTCAAACACACAGCAAGCCTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGCCTAGGCAGACCTCAAACACACAGCAAGCCTGCTG  50

seq1  CTCCAGCTTCACCAATGCTGGGGTTATAGACATCTGCCGTCACACCACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTTCACCAATGCTGGGGTTATAGACATCTGCCGTCACACCACGT  100

seq1  TGCCTCATTAGAATAGTTTTTCTGCTCTTCAGTCCTATAGTGTAACTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATTAGAATAGTTTTTCTGCTCTTCAGTCCTATAGTGTAACTATG  150

seq1  GAAACAGGAAACTAAAGGGAAGGCCAGGCAAAATGGCTCAGTGAGTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGAAACTAAAGGGAAGGCCAGGCAAAATGGCTCAGTGAGTAAAG  200

seq1  GAGCTTGCCTCCAAACCTGATGATCTGAATCCCATCCCTGAGACTCGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGCCTCCAAACCTGATGATCTGAATCCCATCCCTGAGACTCGCAC  250

seq1  GCTGGAAGGGGAGAACTCCCTGGAGTTGTCCTCTAACTGCCACATGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGGGGAGAACTCCCTGGAGTTGTCCTCTAACTGCCACATGCATT  300

seq1  CCCCCAACCCCAACAGACACAAATAAATGAACATTTCAAAGAAAAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACCCCAACAGACACAAATAAATGAACATTTCAAAGAAAAGATTT  350

seq1  GGGTAGTAAAGATGTTATTCAAAAGAAATAACTTTTTCTCAAATAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTAAAGATGTTATTCAAAAGAAATAACTTTTTCTCAAATAATTTC  400

seq1  TAGCTCTTCTTTCACCTGTATCAATTAAATGTATATATTCTGAAATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTCTTTCACCTGTATCAATTAAATGTATATATTCTGAAATTGAA  450

seq1  TTACAATTGCATATATATATATCTTGTCTACCAGGTAAAGAGATGTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTGCATATATATATATCTTGTCTACCAGGTAAAGAGATGTTACA  500

seq1  TATAGCTTGTATGTTGCACACAAATGAAGAGTGTTTAAGATTTTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTGTATGTTGCACACAAATGAAGAGTGTTTAAGATTTTTAAAAA  550

seq1  GTTTAATAGTCAACTTGACAATTAGAACAAAATGGAGAATTGTAAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATAGTCAACTTGACAATTAGAACAAAATGGAGAATTGTAAGAAAC  600

seq1  TCCAAAACAGTTGTGTTAGAAGTATTGAGCTTTTACACAAACCCAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAGTTGTGTTAGAAGTATTGAGCTTTTACACAAACCCAGACAG  650

seq1  GAGTGAACAAGTTAAATTCTAAGGTAACATTACAGAGGGAGCTGGACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAACAAGTTAAATTCTAAGGTAACATTACAGAGGGAGCTGGACAAA  700

seq1  AAAGAATGGATTGTTTGTTTTTGGAAGTCAGATATGTTTTAAAGAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGGATTGTTTGTTTTTGGAAGTCAGATATGTTTTAAAGAAAAGA  750

seq1  AGGAAGAAGGGACTATATTAACTCTATTACCTATTATTAAGTGAGGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGGGACTATATTAACTCTATTACCTATTATTAAGTGAGGAGAA  800

seq1  AAACCAGACCACAGTTACTTAGGGAAGGAAAAAAATATTTCTTTTTTTTA  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAACCAGACCACAGTTACTTAGGGAAGG-AAAAAATATTTCTTTTTTTTA  849

seq1  ATTGGGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAG-TCCTC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTGGGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTTCCTC  899

seq1  CAC-ATGCTCCCCCACCCACT--CCCTCACCCTCCCAC-TCCCACTTCTT  945
      ||| ||||||||||||||| |  || |||||||||||| |||||||||||
seq2  CACAATGCTCCCCCACCCAATTCCCTTCACCCTCCCACTTCCCACTTCTT  949

seq1  AGCCCTGGCGTTCCCCTGTACT-GAGGCATATAAA--GTTTGC-ACG-AT  990
      ||||||||||||||| |||||| ||||||| ||||  |||||| ||| ||
seq2  AGCCCTGGCGTTCCCTTGTACTGGAGGCATTTAAAAGGTTTGCAACGAAT  999

seq1  CAATGGGCCT-CTCTTTCCACTGATGGCCGACTAGGCCA-TCTTCTGAT-  1037
      ||  |||||| |||||||||||||||||||||||||||| ||||||||| 
seq2  CATGGGGCCTCCTCTTTCCACTGATGGCCGACTAGGCCATTCTTCTGATA  1049

seq1  ACATATGCAGCT-AGAGACACGAGCTCCGGGGGGTACTGGTTAGTTCATA  1086
      |||||||||||| |||||| ||||||||  |||||||||  |||||||  
seq2  ACATATGCAGCTAAGAGAC-CGAGCTCC--GGGGTACTG--TAGTTCA--  1092

seq1  TTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGTTACTT  1136
          |||  |||   || |||||||||| || |||| ||  ||| ||| |
seq2  ---ATGTGTCAC---TATGGTTGCAGAT-CCATTAG-TC--TGG-TACCT  1131

seq1  TCTCTAGCTCCTCCATTGGGGGCC  1160
      || |||||| ||| ||||||||||
seq2  TC-CTAGCT-CTCAATTGGGGGCC  1153


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