BAC Information

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BAC

Clone NameB6Ng01-209D03
Chromosome2 (Build37)
Map Location 134,844,781 - 134,845,934
singlet/doubletsinglet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209D03.bB6Ng01-209D03.g
ACCGA027875GA027876
length7621,145
definitionB6Ng01-209D03.b B6Ng01-209D03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctcggt
atatatccagaagatgccccaacgggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gccattcggtattcctcaggtgagaattctttgttcagttctgagcccca
ttttttaagggggttatttgattttctgaggtccaccttcttgagttctt
tatatatgttggatattagtcccctatctgatttaggataggtaaagatc
ctttcccagtctgttggtggtctttttgtcttatagacagtgtcttttgc
cttgcagaaactttggagtttcattaggtcccatttgtcaattctcgatc
ttacagcacaaggccattgctgttctgttcaggaattttttccccctgtg
cccaatatctttctagggctttttccccacttttctcctctattaatttt
cagtgtctctgg
gaattcctgtgttttctgagaccattgcccccagtatttcagtgaactgt
cataaatgctggaactagaaagtgccttgatggactgggggttgtatgag
aactacagcatagttcctgcttaacaagcgctcaccttagagttaaacac
gtagatacagttcaatttaataagtcataataaaaatgcccctgaactca
tgggcagtccaattgtaatgagattctttaattgacttgaaatttaattc
ttatcctctgatcccaatggggtcacttatactttgcaaggagacaggat
gtctgagcagaaactctcgtggtaaaaaatatcagtatgtcaaattctct
aagcccatttcctactagtgaatggtaatacctgcagcaaggtgttttag
tgtagacaggaaggatccacagacccatccatccctctcagaaaaccaag
cctgctagaccacttcaactaagatattgatcaaaggttacctggctgga
tcatggcacccataaacacttactaactgggagtagatctcctgcttcag
cctggcttggggccacacccctggtgaagtcatccccattttctatacag
gtcagaagtattgctgaggttggctatgaagaatgtcagaactaggtttg
ttttttcttctctgcagctcatgtagatttctcttcatcttctgaccctg
acctagagtcagcagatccctgccagtcgatgtataatatcactgtcata
tgttgtcaccagctcctgtgattttgtaagatatagtaaccttgattcca
tgacagtctgagtggtactgcttgcccaaccatgtgccagctttattaga
gcctagcatgaggatcaccatcttcagtttccctcaagtgtcaggaagta
gacaatgtctatccaagtttgcatggcttcacaggatgagatctgattgt
agtgaacctcagaatgataccgagtggttttagtcctcattctgggtttt
atatattgaaataacagtagaattttaaagaacatgaagtttattgccta
ctggatggctttactttcattgttggtagaaacaggaatatcagatgcaa
gacatgaacttagcactggagccgcatctttgtgctgataatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134844781_134845934
seq2: B6Ng01-209D03.g_65_1209

seq1  GAATTCCTGTGTTTTCTGAGACCATTGCCCCCAGTATTTCAGTGAACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGTTTTCTGAGACCATTGCCCCCAGTATTTCAGTGAACTGT  50

seq1  CATAAATGCTGGAACTAGAAAGTGCCTTGATGGACTGGGGGTTGTATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGCTGGAACTAGAAAGTGCCTTGATGGACTGGGGGTTGTATGAG  100

seq1  AACTACAGCATAGTTCCTGCTTAACAAGCGCTCACCTTAGAGTTAAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGCATAGTTCCTGCTTAACAAGCGCTCACCTTAGAGTTAAACAC  150

seq1  GTAGATACAGTTCAATTTAATAAGTCATAATAAAAATGCCCCTGAACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATACAGTTCAATTTAATAAGTCATAATAAAAATGCCCCTGAACTCA  200

seq1  TGGGCAGTCCAATTGTAATGAGATTCTTTAATTGACTTGAAATTTAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTCCAATTGTAATGAGATTCTTTAATTGACTTGAAATTTAATTC  250

seq1  TTATCCTCTGATCCCAATGGGGTCACTTATACTTTGCAAGGAGACAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTCTGATCCCAATGGGGTCACTTATACTTTGCAAGGAGACAGGAT  300

seq1  GTCTGAGCAGAAACTCTCGTGGTAAAAAATATCAGTATGTCAAATTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGCAGAAACTCTCGTGGTAAAAAATATCAGTATGTCAAATTCTCT  350

seq1  AAGCCCATTTCCTACTAGTGAATGGTAATACCTGCAGCAAGGTGTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATTTCCTACTAGTGAATGGTAATACCTGCAGCAAGGTGTTTTAG  400

seq1  TGTAGACAGGAAGGATCCACAGACCCATCCATCCCTCTCAGAAAACCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAGGAAGGATCCACAGACCCATCCATCCCTCTCAGAAAACCAAG  450

seq1  CCTGCTAGACCACTTCAACTAAGATATTGATCAAAGGTTACCTGGCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAGACCACTTCAACTAAGATATTGATCAAAGGTTACCTGGCTGGA  500

seq1  TCATGGCACCCATAAACACTTACTAACTGGGAGTAGATCTCCTGCTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCACCCATAAACACTTACTAACTGGGAGTAGATCTCCTGCTTCAG  550

seq1  CCTGGCTTGGGGCCACACCCCTGGTGAAGTCATCCCCATTTTCTATACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTGGGGCCACACCCCTGGTGAAGTCATCCCCATTTTCTATACAG  600

seq1  GTCAGAAGTATTGCTGAGGTTGGCTATGAAGAATGTCAGAACTAGGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGTATTGCTGAGGTTGGCTATGAAGAATGTCAGAACTAGGTTTG  650

seq1  TTTTTTCTTCTCTGCAGCTCATGTAGATTTCTCTTCATCTTCTGACCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTCTCTGCAGCTCATGTAGATTTCTCTTCATCTTCTGACCCTG  700

seq1  ACCTAGAGTCAGCAGATCCCTGCCAGTCGATGTATAATATCACTGTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGTCAGCAGATCCCTGCCAGTCGATGTATAATATCACTGTCATA  750

seq1  TGTTGTCACCAGCTCCTGTGATTTTGTAAGATATAGTAACCTTGATTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCACCAGCTCCTGTGATTTTGTAAGATATAGTAACCTTGATTCCA  800

seq1  TGACAGTCTGAGTGGTACTGCTTGCCCAACCATGTGCCAGCTTTATTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTCTGAGTGGTACTGCTTGCCCAACCATGTGCCAGCTTTATTAGA  850

seq1  GCCTAGCATGAGGATCACCATCTTCAGTTTCCCTCAAGTGTCAGGAAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCATGAGGATCACCATCTTCAGTTTCCCTCAAGTGTCAGGAAGTA  900

seq1  GACAATGTCTATCCAAGTTTGCATGGCTTCACAGGATGAGATCTGATTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTCTATCCAAGTTTGCATGGCTTCACAGGATGAGATCTGATTGT  950

seq1  AGTGAACCTCAGAAATGAATACCGAGTGGTTTTAGTCCTCATTCT-GGTT  999
      |||||||||||| |||| ||||||||||||||||||||||||||| ||||
seq2  AGTGAACCTCAG-AATG-ATACCGAGTGGTTTTAGTCCTCATTCTGGGTT  998

seq1  TTATATA-TGAAATACAAGTAGAA-TTTAAAGAACATGGAGTTTATTTGG  1047
      ||||||| |||||||  ||||||| ||||||||||||| ||||||||  |
seq2  TTATATATTGAAATAACAGTAGAATTTTAAAGAACATGAAGTTTATT--G  1046

seq1  CCTACTTGGATTGC-TTACTTTCATTTGTTTGGTAGAAACAGGGATATCA  1096
      ||||| ||||| || |||||||||||   |||||||||||||| ||||||
seq2  CCTAC-TGGATGGCTTTACTTTCATT--GTTGGTAGAAACAGGAATATCA  1093

seq1  GATGGCAGGACATGAAC-TAGCACTGGGAGGCCGCCATCTTTTTGTGCTT  1145
      ||| ||| ||||||||| |||||||||   |||| ||||  ||||||| |
seq2  GAT-GCAAGACATGAACTTAGCACTGG--AGCCG-CATC--TTTGTGC-T  1136

seq1  GATAATGTC  1154
      |||||||||
seq2  GATAATGTC  1145