BAC Information

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BAC

Clone NameB6Ng01-209I01
Chromosome2 (Build37)
Map Location 173,812,717 - 173,813,791
singlet/doubletsinglet
Overlap genenone
Upstream geneSpo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912
Downstream geneLOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209I01.bB6Ng01-209I01.g
ACCGA028102GA028103
length1,087238
definitionB6Ng01-209I01.b B6Ng01-209I01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttacaccctggagatggcatgcggggcagtgggagagtgaggg
cattaaaagcagctttcacccaacagcccccaggatgcccagagaggccc
tggtttcaataccctctcagatccaagcgttcctttgatcaaagtgtggc
atctcttagtggtatatgcacatggcgttatccccactccacaggggtac
agggggattagccgagggcaagtcaacctggcctctcccaggatggcata
gctgcttgtaggggcagtagaaacttagagtctccggtctgtgatttcaa
acacattggccataatcgcccagacccctaagagacaagctcacgagcca
taagacaggccccccggcactccggagtcttcatcaagaccctgctcaac
ctactgatgctgatggaaaggcccaggctgccaggcaattaggtgtgaca
ctcagtacccgcctgcaggccccaagagccatctgtgagtttcactttca
tgaggctctttggatggccttggagaattgatgcaggcagagaagggcca
gccaggcgaggaggaagatgaaactccaacattaacgaagccgagggagc
agctgctccagtctccaaagcagggcagggatgaagcatgagctaagagg
acagatactcggaggcgccacagagaggacattagccactcctgggctgg
catgcacatcctacctatgggcaaatcttcatagcacatgctaagtgctg
ccaatgtgctgggcacgggggctggagataagcagacaggctcatgtcct
cagcaggctctagtagaaagaagaagtcatagtcctgagttcagatacct
ctgtggtgacttcagatgctggtgaaactgtagggagacttactcagaga
tgtatatgccaaacagcagttcctattagagaaccaaagaaggaatcctc
agactggggacacgcctcacgtagttgcgtgttgttacgcaggccgacat
ggacagtagctaccacacacccagggatcaccacaggatggtaacacctg
gcagctattttttctccaaaatccatcacccctcaga
tatgtcatagaatacacacacacacacacacacacacacacacacacact
gggatttggtctgacttgagcttgcacaactcttgagcagctgtctggtc
acatgtgccgctgctcttcagtgtctggaagatgctgtttccttgtggtc
actcactgcctctggctctttactctttccactccctcttctgctgtgat
ctctgatccttgggtggaggaggtgtgatagggtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173812717_173813791
seq2: B6Ng01-209I01.b_46_1132 (reverse)

seq1  TCTGA-GGGTGATGGATTT--GAG-AAAAATAACTGGCA-GTGTTTCC-T  44
      ||||| |||||||||||||  ||| ||||||| ||| || ||||| || |
seq2  TCTGAGGGGTGATGGATTTTGGAGAAAAAATAGCTGCCAGGTGTTACCAT  50

seq1  TCTGTGGTGATCCTGGTGTGTGT----GCTTCTGTCCATGTCGGCCTGCG  90
       ||||||||||||  | ||||||    ||| |||||||||||||||||||
seq2  CCTGTGGTGATCCCTGGGTGTGTGGTAGCTACTGTCCATGTCGGCCTGCG  100

seq1  TA--CACACGC-ACTACGTGAGCCGTGTCCCCAGTCTGAGGATTCCTTCT  137
      ||   |||||| |||||||||| |||||||||||||||||||||||||||
seq2  TAACAACACGCAACTACGTGAGGCGTGTCCCCAGTCTGAGGATTCCTTCT  150

seq1  TTGGTTCTCTAATAGGAACCTGCTGTTTGGCATATACATCTCTGAGTAAG  187
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGGTTCTCTAATAGGAA-CTGCTGTTTGGCATATACATCTCTGAGTAAG  199

seq1  TCTCCCTACAGTTTCACCAGCATCTGAAGTCACCACAGAGGTATCTGAAC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTACAGTTTCACCAGCATCTGAAGTCACCACAGAGGTATCTGAAC  249

seq1  TCAGGACTATGACTTCTTCTTTCTACTAGAGCCTGCTGAGGACATGAGCC  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTATGACTTCTTCTTTCTACTAGAGCCTGCTGAGGACATGAGCC  299

seq1  TGTCTGCTTATCTCCAGCCCCCGTGCCCAGCACATTGGCAGCACTTAGCA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTATCTCCAGCCCCCGTGCCCAGCACATTGGCAGCACTTAGCA  349

seq1  TGTGCTATGAAGATTTGCCCATAGGTAGGATGTGCATGCCAGCCCAGGAG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATGAAGATTTGCCCATAGGTAGGATGTGCATGCCAGCCCAGGAG  399

seq1  TGGCTAATGTCCTCTCTGTGGCGCCTCCGAGTATCTGTCCTCTTAGCTCA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAATGTCCTCTCTGTGGCGCCTCCGAGTATCTGTCCTCTTAGCTCA  449

seq1  TGCTTCATCCCTGCCCTGCTTTGGAGACTGGAGCAGCTGCTCCCTCGGCT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATCCCTGCCCTGCTTTGGAGACTGGAGCAGCTGCTCCCTCGGCT  499

seq1  TCGTTAATGTTGGAGTTTCATCTTCCTCCTCGCCTGGCTGGCCCTTCTCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAATGTTGGAGTTTCATCTTCCTCCTCGCCTGGCTGGCCCTTCTCT  549

seq1  GCCTGCATCAATTCTCCAAGGCCATCCAAAGAGCCTCATGAAAGTGAAAC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATCAATTCTCCAAGGCCATCCAAAGAGCCTCATGAAAGTGAAAC  599

seq1  TCACAGATGGCTCTTGGGGCCTGCAGGCGGGTACTGAGTGTCACACCTAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATGGCTCTTGGGGCCTGCAGGCGGGTACTGAGTGTCACACCTAA  649

seq1  TTGCCTGGCAGCCTGGGCCTTTCCATCAGCATCAGTAGGTTGAGCAGGGT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGGCAGCCTGGGCCTTTCCATCAGCATCAGTAGGTTGAGCAGGGT  699

seq1  CTTGATGAAGACTCCGGAGTGCCGGGGGGCCTGTCTTATGGCTCGTGAGC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGAAGACTCCGGAGTGCCGGGGGGCCTGTCTTATGGCTCGTGAGC  749

seq1  TTGTCTCTTAGGGGTCTGGGCGATTATGGCCAATGTGTTTGAAATCACAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTTAGGGGTCTGGGCGATTATGGCCAATGTGTTTGAAATCACAG  799

seq1  ACCGGAGACTCTAAGTTTCTACTGCCCCTACAAGCAGCTATGCCATCCTG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGACTCTAAGTTTCTACTGCCCCTACAAGCAGCTATGCCATCCTG  849

seq1  GGAGAGGCCAGGTTGACTTGCCCTCGGCTAATCCCCCTGTACCCCTGTGG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGCCAGGTTGACTTGCCCTCGGCTAATCCCCCTGTACCCCTGTGG  899

seq1  AGTGGGGATAACGCCATGTGCATATACCACTAAGAGATGCCACACTTTGA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGATAACGCCATGTGCATATACCACTAAGAGATGCCACACTTTGA  949

seq1  TCAAAGGAACGCTTGGATCTGAGAGGGTATTGAAACCAGGGCCTCTCTGG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAACGCTTGGATCTGAGAGGGTATTGAAACCAGGGCCTCTCTGG  999

seq1  GCATCCTGGGGGCTGTTGGGTGAAAGCTGCTTTTAATGCCCTCACTCTCC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTGGGGGCTGTTGGGTGAAAGCTGCTTTTAATGCCCTCACTCTCC  1049

seq1  CACTGCCCCGCATGCCATCTCCAGGGTGTAAGGAATTC  1075
      ||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCCCGCATGCCATCTCCAGGGTGTAAGGAATTC  1087