BAC Information

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BAC

Clone NameB6Ng01-209J06
Chromosome2 (Build37)
Map Location 21,669,921 - 21,671,017
singlet/doubletsinglet
Overlap geneGpr158
Upstream geneEtl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209J06.bB6Ng01-209J06.g
ACCGA028159GA028160
length1,2191,099
definitionB6Ng01-209J06.b B6Ng01-209J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaagggctgagaaacacataaaaaaaaa
tgttcaatatccttaatcttcagggaaatgcaaatcaaaaacgtccctga
gatcccacctcacaccaggcagaatgtctaagataaaaaattcaggtgac
agcagatgctggctacgatgtggagaaagaggaacacttctccattgctg
gcaggattgtaagctggaatccagagtggatttccactctggaaatcagt
ttggcagttccttagaaaattgaacagagtcatactgggaagactcagta
ataccactgctgggcatatatccagaagatgctccaactgttcatagcag
ccttatttataatagcaagaagctggaaagaacccagatgttcctcagca
gaagaatggatacagaaaatgtggtacatttacgcaatggagtactattc
agctattaaaaacaacgaattcatgaaattattagacaaatggatggatc
tggttgataacatcctaagtgaggtaacccaatcacaaagggacacacat
gatatgcactcactgataagtgaatattagcccagaagcttagaataccc
aagatatagtttgcaaaacacacgaaaatcaagaagaaggaagaccaaag
tgtggatacttcaatacttcttagaagggggaacaaaatacccatggaag
gagttacagagacaaagttctgatcagagattgaaagaatgacggtctat
aaacagccccacctcaggatccaacccataaaccatcaccaaacccagac
attattgcagatgccaacaagagcttgctgacaggaccctgatatagttg
tctcctgagaagacctaccagtgcctgactaatgaagaagtggatgctca
cagccatccattggacagagcacaaggtccccaatgaaggagctagagaa
agttcccaaaggagctgattgggtttacaaccacatagaagaacaacatg
tgaactaaccagtacccagagctcctggtactaaaccaccacaaagaaaa
acaccatggatgtactcatgcttctagctgatatatatataagcagaaga
aatcgcttagtcagtcatcaaatgggaggaatagcttgttctgtgaagtc
cttatgtccaataaagattacaggccatgtattcagggaatgcccggatt
gggaaggcactgggcgtag
gaattcctgctttatcttcttctctgatggaagtgatgcggaagaagggt
aagcaaatcaccacccccaccctgggatgattttggccatggtgttttgc
tgtaaccctagagcaggaaaacagagctaggctggccggtcctacttttg
gcgggctcacagttttctaggaatggtaactactcagtttatgaatgaac
aatttaaatgtaagcaataaagaaaaagcagaatacaagagtaaagccat
gagattcacacaggactagagtaattttcctcatcaaattagacacagta
tctaccagttttaagcctttagcagtcattcttcactggcataatttcta
gagactcacacaggaaatagcttccattccagtctttaaaataagcaaaa
gatgattaaagaaaccagtttcccatattctaattatttcacatgtcctc
atgtttgctgttgtctcagaaccagttaatatcctctttaaatcagtttc
tatttgttgttttaaagcattttgaagggaacttcatattgttactaaaa
agaaaaaagaaaaaacagccaatactttccataaatagatagcagcaatg
gaaataaatacactagaacagaatggcaactcctaaggacacagcactga
agtgaacagctccaagcctgcagcctggtctgcctcttccaaatgagatt
agcaggggtgtgacaggtgttaagaaaaacctagctgctctgaactaatc
tttttcctggaaataatcaggatgatttgaaaaggaacctgaacagaaat
aatctcactttatgagctgatgctattgaccactgtcctcaaaatatttt
cctgccaaagtgttacgtgttccaagcacttgggtcaccccaagtatcac
atggttaagctggagaatataaatgaactgtaggaagcagtttagagatc
tcaatttgacctttactcattcattaattcaattatttcattcatctaat
ctggattactctcagcattatttagaaggagggagagaaagagatggagg
gaaccaggagagcagatggtaaagggagaatgggtttgatttgtgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21669921_21671017
seq2: B6Ng01-209J06.g_65_1163 (reverse)

seq1  TCTACACAAAATCAA--CCA-TCTCCC-TTACCTTCTGCTCTTCCTGGTT  46
      ||||||| |||||||  ||| |||||| ||||| ||||||| ||||||||
seq2  TCTACAC-AAATCAAACCCATTCTCCCTTTACCATCTGCTC-TCCTGGTT  48

seq1  CCCTCCATCTCTTTCTCTCCCTTCCTTTCTAATTAATTGCTGAGAGTAAT  96
      ||||||||||||||||||||||  | |||||| ||| |||||||||||||
seq2  CCCTCCATCTCTTTCTCTCCCT--CCTTCTAAATAA-TGCTGAGAGTAAT  95

seq1  CCAGATTAGATGAATG-AATAATTGAATTAATGAATGAGTAAAGGTC-AA  144
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  CCAGATTAGATGAATGAAATAATTGAATTAATGAATGAGTAAAGGTCAAA  145

seq1  TTGAGATCTCTAAACTGCTTCCTACAGTTCATTTATATTCTCCAGCTT-A  193
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGAGATCTCTAAACTGCTTCCTACAGTTCATTTATATTCTCCAGCTTAA  195

seq1  CCATGTGATACTTGGGGTGACCCAAGTGCTTGGAACACGTAACACTTTGG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGATACTTGGGGTGACCCAAGTGCTTGGAACACGTAACACTTTGG  245

seq1  CAGGAAAATATTTTGAGGACAGTGGTCAATAGCATCAGCTCATAAAGTGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAATATTTTGAGGACAGTGGTCAATAGCATCAGCTCATAAAGTGA  295

seq1  GATTATTTCTGTTCAGGTTCCTTTTCAAATCATCCTGATTATTTCCAGGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTCTGTTCAGGTTCCTTTTCAAATCATCCTGATTATTTCCAGGA  345

seq1  AAAAGATTAGTTCAGAGCAGCTAGGTTTTTCTTAACACCTGTCACACCCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTAGTTCAGAGCAGCTAGGTTTTTCTTAACACCTGTCACACCCC  395

seq1  TGCTAATCTCATTTGGAAGAGGCAGACCAGGCTGCAGGCTTGGAGCTGTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATCTCATTTGGAAGAGGCAGACCAGGCTGCAGGCTTGGAGCTGTT  445

seq1  CACTTCAGTGCTGTGTCCTTAGGAGTTGCCATTCTGTTCTAGTGTATTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGTGCTGTGTCCTTAGGAGTTGCCATTCTGTTCTAGTGTATTTA  495

seq1  TTTCCATTGCTGCTATCTATTTATGGAAAGTATTGGCTGTTTTTTCTTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTGCTGCTATCTATTTATGGAAAGTATTGGCTGTTTTTTCTTTT  545

seq1  TTCTTTTTAGTAACAATATGAAGTTCCCTTCAAAATGCTTTAAAACAACA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGTAACAATATGAAGTTCCCTTCAAAATGCTTTAAAACAACA  595

seq1  AATAGAAACTGATTTAAAGAGGATATTAACTGGTTCTGAGACAACAGCAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAACTGATTTAAAGAGGATATTAACTGGTTCTGAGACAACAGCAA  645

seq1  ACATGAGGACATGTGAAATAATTAGAATATGGGAAACTGGTTTCTTTAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGACATGTGAAATAATTAGAATATGGGAAACTGGTTTCTTTAAT  695

seq1  CATCTTTTGCTTATTTTAAAGACTGGAATGGAAGCTATTTCCTGTGTGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTGCTTATTTTAAAGACTGGAATGGAAGCTATTTCCTGTGTGAG  745

seq1  TCTCTAGAAATTATGCCAGTGAAGAATGACTGCTAAAGGCTTAAAACTGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAAATTATGCCAGTGAAGAATGACTGCTAAAGGCTTAAAACTGG  795

seq1  TAGATACTGTGTCTAATTTGATGAGGAAAATTACTCTAGTCCTGTGTGAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACTGTGTCTAATTTGATGAGGAAAATTACTCTAGTCCTGTGTGAA  845

seq1  TCTCATGGCTTTACTCTTGTATTCTGCTTTTTCTTTATTGCTTACATTTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGCTTTACTCTTGTATTCTGCTTTTTCTTTATTGCTTACATTTA  895

seq1  AATTGTTCATTCATAAACTGAGTAGTTACCATTCCTAGAAAACTGTGAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCATTCATAAACTGAGTAGTTACCATTCCTAGAAAACTGTGAGC  945

seq1  CCGCCAAAAGTAGGACCGGCCAGCCTAGCTCTGTTTTCCTGCTCTAGGGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCAAAAGTAGGACCGGCCAGCCTAGCTCTGTTTTCCTGCTCTAGGGT  995

seq1  TACAGCAAAACACCATGGCCAAAATCATCCCAGGGTGGGGGTGGTGATTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAAACACCATGGCCAAAATCATCCCAGGGTGGGGGTGGTGATTT  1045

seq1  GCTTACCCTTCTTCCGCATCACTTCCATCAGAGAAGAAGATAAAGCAGGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCCTTCTTCCGCATCACTTCCATCAGAGAAGAAGATAAAGCAGGA  1095

seq1  ATTC  1097
      ||||
seq2  ATTC  1099