BAC Information

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BAC

Clone NameB6Ng01-209N03
Chromosome2 (Build37)
Map Location 134,696,459 - 134,830,164
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209N03.bB6Ng01-209N03.g
ACCGA028337GA028338
length3051,007
definitionB6Ng01-209N03.b B6Ng01-209N03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,829,860 - 134,830,164)(134,696,459 - 134,697,447)
sequence
aatgcccacttctggcctcagtggatccaagatacacatatgttgtatac
acaaacacacacacacgcacgcccacgcacacacacatgcaggcaaatca
ctagacatataaaaacatttaaaaaaataaaacagtagaaactgttgtgg
cacataatcttataagaatgacaaggacacattttatatattttgaaaga
acctgccatcacagatcactaggaaaagacagattttgtattacctgacc
ccagaggtctagaactctataaactctgtgtgtgtgtgtgtgtgtgtgtg
tgtgt
gaattctccatttactgttttttaaaggcaattcactatagtgactgaga
cgatggaaaaagaaaccataaataaatgagaattttgtgcatctcatccc
gaaaagcttagattggcatccttctctagaaagtgcttgccatggggatg
tcaaccttgtagtgtgggatgctgagttcagttccctttataattcaatc
aacctgttgattagttcaatggatggaagagtgactaccaactaccagat
cacctggtatatgagccttgtggaaggcattcgttcactatcaccaggta
tttaccagataccaccttagagatatccctatggaaacagatataactcc
atggtcttgaagatggacagaccatttaacgggaggaaggagaaccaaca
ccctagggtagtgcaggaggatacacagagtgacagggtgacacattcag
gaggcaggaggaggcagaatggtgaggaaaataatagaacaaaactgttg
agtctttgtgtcaactgaaatgtcttgcaatgcttatgtgagggggacat
ataaccaagatacaacctttttaagcaggtgcttagctgagcagattctt
ttttcctttcttttaaaaaatgtaacctgaagctaggacagtaacttttt
atagagaaagaaaatacagttagaaagtggacaagtactgataaaaacta
ttattctacaagttactgccacgtaaccagcacacatagactgagaaatg
ggaacaattcacagctctccaaccacactgtcccttcttcctagcagatg
tcacttctcctcctgagggcagccctcttgtattctacacagacagattt
agtttgacattttggggcaatctatgtccatgggaaactcacagcttact
ctaatttgggttggatctgggtttctgtcctgtcactcactatgtcattt
tgtaagattttattcacaatgccccaaagcttgataattcttggttaatg
tataatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134829860_134830164
seq2: B6Ng01-209N03.b_54_358 (reverse)

seq1  ACACACACACACACACACACACACACACAGAGTTTATAGAGTTCTAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACAGAGTTTATAGAGTTCTAGACC  50

seq1  TCTGGGGTCAGGTAATACAAAATCTGTCTTTTCCTAGTGATCTGTGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTCAGGTAATACAAAATCTGTCTTTTCCTAGTGATCTGTGATGG  100

seq1  CAGGTTCTTTCAAAATATATAAAATGTGTCCTTGTCATTCTTATAAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTTTCAAAATATATAAAATGTGTCCTTGTCATTCTTATAAGATT  150

seq1  ATGTGCCACAACAGTTTCTACTGTTTTATTTTTTTAAATGTTTTTATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCACAACAGTTTCTACTGTTTTATTTTTTTAAATGTTTTTATATG  200

seq1  TCTAGTGATTTGCCTGCATGTGTGTGTGCGTGGGCGTGCGTGTGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGATTTGCCTGCATGTGTGTGTGCGTGGGCGTGCGTGTGTGTGTG  250

seq1  TTTGTGTATACAACATATGTGTATCTTGGATCCACTGAGGCCAGAAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTATACAACATATGTGTATCTTGGATCCACTGAGGCCAGAAGTGG  300

seq1  GCATT  305
      |||||
seq2  GCATT  305

seq1: chr2_134696459_134697447
seq2: B6Ng01-209N03.g_66_1072

seq1  GAATTCTCCATTTACTGTTTTTTAAAGGCAATTCACTATAGTGACTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTTACTGTTTTTTAAAGGCAATTCACTATAGTGACTGAGA  50

seq1  CGATGGAAAAAGAAACCATAAATAAATGAGAATTTTGTGCATCTCATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGAAAAAGAAACCATAAATAAATGAGAATTTTGTGCATCTCATCCC  100

seq1  GAAAAGCTTAGATTGGCATCCTTCTCTAGAAAGTGCTTGCCATGGGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTTAGATTGGCATCCTTCTCTAGAAAGTGCTTGCCATGGGGATG  150

seq1  TCAACCTTGTAGTGTGGGATGCTGAGTTCAGTTCCCTTTATAATTCAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTGTAGTGTGGGATGCTGAGTTCAGTTCCCTTTATAATTCAATC  200

seq1  AACCTGTTGATTAGTTCAATGGATGGAAGAGTGACTACCAACTACCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTGATTAGTTCAATGGATGGAAGAGTGACTACCAACTACCAGAT  250

seq1  CACCTGGTATATGAGCCTTGTGGAAGGCATTGGTTCACTATCACCAGGTA  300
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CACCTGGTATATGAGCCTTGTGGAAGGCATTCGTTCACTATCACCAGGTA  300

seq1  TTTACCAGATACCACCTTAGAGATATCCCTATGGAAACAGATATAACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGATACCACCTTAGAGATATCCCTATGGAAACAGATATAACTCC  350

seq1  ATGGTCTTGAAGATGGACAGACCATTTAACGGGAGGAAGGAGAACCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTGAAGATGGACAGACCATTTAACGGGAGGAAGGAGAACCAACA  400

seq1  CCCTAGGGTAGTGCAGGAGGATACACAGAGTGACAGGGTGACACATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGGTAGTGCAGGAGGATACACAGAGTGACAGGGTGACACATTCAG  450

seq1  GAGGCAGGAGGAGGCAGAATGGTGAGGAAAATAATAGAACAAAACTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGAGGAGGCAGAATGGTGAGGAAAATAATAGAACAAAACTGTTG  500

seq1  AGTCTTTGTGTCAACTGAAATGTCTTGCAATGCTTATGTGAGGGGGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTGTCAACTGAAATGTCTTGCAATGCTTATGTGAGGGGGACAT  550

seq1  ATAACCAAGATACAACCTTTTTAAGCAGGTGCTTAGCTGAGCAGATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGATACAACCTTTTTAAGCAGGTGCTTAGCTGAGCAGATTCTT  600

seq1  TTTTCCTTTC-TTTAAAAAATGTAACCTGAAGCTAGGACAGTAACTTTTT  649
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTCTTTTAAAAAATGTAACCTGAAGCTAGGACAGTAACTTTTT  650

seq1  ATAGAGAAAGAAAATACAGTTAGAAAGTGGACAAGTACTGATAAAAACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAAGAAAATACAGTTAGAAAGTGGACAAGTACTGATAAAAACTA  700

seq1  TTATTCTACAAG-TACTGCCACGTAACCAGCACACATAGACTGAGAAAT-  747
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  TTATTCTACAAGTTACTGCCACGTAACCAGCACACATAGACTGAGAAATG  750

seq1  GGAACAATTCACAGCTCTCCAACCACACTGT-CCTTCTTCCTAGCAGATG  796
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGAACAATTCACAGCTCTCCAACCACACTGTCCCTTCTTCCTAGCAGATG  800

seq1  TCACTTCTCCTCCTGAGGGCAG-CCTC-TGGATTCTAAACAGACAGA-TT  843
      |||||||||||||||||||||| |||| || |||||| ||||||||| ||
seq2  TCACTTCTCCTCCTGAGGGCAGCCCTCTTGTATTCTACACAGACAGATTT  850

seq1  AG-TTGACATTT--GGGCAATCTATGTCAAT-GGAAACTCACAGCTTACT  889
      || |||||||||  |||||||||||||| || ||||||||||||||||||
seq2  AGTTTGACATTTTGGGGCAATCTATGTCCATGGGAAACTCACAGCTTACT  900

seq1  CTA--TTTGGTTGTATCTGGTTTTCTGT-CTGTCACTCACTATGTCA-TT  935
      |||  || ||||| |||||| ||||||| |||||||||||||||||| ||
seq2  CTAATTTGGGTTGGATCTGGGTTTCTGTCCTGTCACTCACTATGTCATTT  950

seq1  TGTAAGA-TTTATTCACAATGCCCC-AAGCTTTGTAATTCTT-GTTATTG  982
      ||||||| ||||||||||||||||| ||||||  |||||||| |||| ||
seq2  TGTAAGATTTTATTCACAATGCCCCAAAGCTTGATAATTCTTGGTTAATG  1000

seq1  TATAATG  989
      |||||||
seq2  TATAATG  1007