BAC Information

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BAC

Clone NameB6Ng01-210C06
Chromosome2 (Build37)
Map Location 51,023,905 - 51,025,037
singlet/doubletsinglet
Overlap genenone
Upstream geneLypd6, 2010311D03Rik, LOC666781, LOC227885, Rnd3
Downstream geneLOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210C06.bB6Ng01-210C06.g
ACCGA028561GA028562
length1,1571,120
definitionB6Ng01-210C06.b B6Ng01-210C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgatagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagaactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttacaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaaggctgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatagatcatgtagagactgccttatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccta
taggtggatcacattatgactaaccagtaccccggagctctgactctagc
tgcatgtgttatcaaagatgctagtcggcatcactggtaaggagagtcat
ggacacacaaactttatatgccccagacagggatgccatggtcaaaatgg
ggatgtc
gaattccattaactggactaagcacttgcttgtttgattattttattatt
tttcacatattttcttccctttacacataatgttttgacttgattttcta
aaaatgttaaatttcctcctcttacaacccttttattattttttaactat
gtcttcaaattttcaggagctctttcttcatttttgtccgtcccagaatg
tgtcttttgtggatttaagatcatttctactctatgaatgcctctgcaga
ttttttgctttattctcacttgctgcttaaattgacttatatttctctgg
gcttttatgttctatttacttctttctttttgcactgtaagtttgccaca
actgccttttgattttatttgttttattatacttatgggaaaggtaatat
aaaattcatgctagctttagtacaggaaaggaattttctaccaataacct
ttctgccgaaaactggcagggaatgggcaatcctgctttggtacctctaa
gaggcagaatccagtggctttctatgtagaatgacaactcccataccctc
tgccctaacttcccctgagcagtggcttcagtttctcaaggaggactcct
ctaacttctgtggtcatggtggtcatggttgagtgataagcagaaacttg
gtcctggccatcttgtggagatcaatcgaaatgtggtccatatatttttt
tactgccatcattgcacccattgtctttctctccatcactgcctggtacc
tcttcatcttaatcttctttgggattcttcaggaacaataagttccaacc
aggaatattaatgaacttacaccagtgttttatactgatcaactttatgt
tctatgaaacagtctactgtatgtccatgcatgtcttccaagagcatgtt
agatcacttgtgttttgaagcctaaccctcttttatttttggcatttcat
gtgaaatggaatagtcaagtagaaaagaaagatgcatgccatccaccatc
tagataaagtcacagtagctataaaaacacttctcatcactggttagcaa
catatctcagaactatttactacacacaagtacccgttcactcagtcttt
attacatcttaccttatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51023905_51025037
seq2: B6Ng01-210C06.g_67_1186 (reverse)

seq1  GAGATAAAGGTAAAGATGTAATAAAGAACTGAGTGACGTGTTACTTTGTG  50
      ||||| ||||| |||||||||||||| |||||||||   | ||| |||||
seq2  GAGAT-AAGGT-AAGATGTAATAAAG-ACTGAGTGAACGGGTAC-TTGTG  46

seq1  TGTAGTAAATATGTCTGAGGATATGTTGCTAAACCAGTGATGAGAAGTTG  100
      |||||||||||  ||||| ||||||||||| |||||||||||||||| ||
seq2  TGTAGTAAATAGTTCTGA-GATATGTTGCT-AACCAGTGATGAGAAG-TG  93

seq1  TTTTTATAAGCTTACTTGTGACTTTTAATTCTAGATGGTGGATGGCATGC  150
      ||||||| ||| ||| |||||||||    |||||||||||||||||||||
seq2  TTTTTAT-AGC-TAC-TGTGACTTT---ATCTAGATGGTGGATGGCATGC  137

seq1  ATCTTTCTTTTCCTACTTGACTATTCCATTTCACATGAAATGCCAAAAAT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTTT-CTACTTGACTATTCCATTTCACATGAAATGCCAAAAAT  186

seq1  -AAAGAGGGTTAGGCTTCAAAACACAAGTGATCTAAACATGCTCTTGGAA  249
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAGAGGGTTAGGCTTCAAAACACAAGTGATCT-AACATGCTCTTGGAA  235

seq1  GACATGCATGGACATACAGTAGACTGTTTCATAGAACATAAAGTTGATCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCATGGACATACAGTAGACTGTTTCATAGAACATAAAGTTGATCA  285

seq1  GTATAAAACACTGGTGTAAGTTCATTAATATTCCTGGTTGGAACTTATTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAACACTGGTGTAAGTTCATTAATATTCCTGGTTGGAACTTATTG  335

seq1  TTCCTGAAGAATCCCAAAGAAGATTAAGATGAAGAGGTACCAGGCAGTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAGAATCCCAAAGAAGATTAAGATGAAGAGGTACCAGGCAGTGA  385

seq1  TGGAGAGAAAGACAATGGGTGCAATGATGGCAGT-AAAAAATATATGGAC  448
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGAGAGAAAGACAATGGGTGCAATGATGGCAGTAAAAAAATATATGGAC  435

seq1  CACATTTCGATTGATCTCCACAAGATGGCCAGGACCAAGTTTCTGCTTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCGATTGATCTCCACAAGATGGCCAGGACCAAGTTTCTGCTTAT  485

seq1  CACTCAACCATGACCACCATGACCACAGAAGTTAGAGGAGTCCTCCTTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACCATGACCACCATGACCACAGAAGTTAGAGGAGTCCTCCTTGA  535

seq1  GAAACTGAAGCCACTGCTCAGGGGAAGTTAGGGCAGAGGGTATGGGAGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAGCCACTGCTCAGGGGAAGTTAGGGCAGAGGGTATGGGAGTT  585

seq1  GTCATTCTACATAGAAAGCCACTGGATTCTGCCTCTTAGAGGTACCAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTACATAGAAAGCCACTGGATTCTGCCTCTTAGAGGTACCAAAG  635

seq1  CAGGATTGCCCATTCCCTGCCAGTTTTCGGCAGAAAGGTTATTGGTAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTGCCCATTCCCTGCCAGTTTTCGGCAGAAAGGTTATTGGTAGAA  685

seq1  AATTCCTTTCCTGTACTAAAGCTAGCATGAATTTTATATTACCTTTCCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTTCCTGTACTAAAGCTAGCATGAATTTTATATTACCTTTCCCA  735

seq1  TAAGTATAATAAAACAAATAAAATCAAAAGGCAGTTGTGGCAAACTTACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATAATAAAACAAATAAAATCAAAAGGCAGTTGTGGCAAACTTACA  785

seq1  GTGCAAAAAGAAAGAAGTAAATAGAACATAAAAGCCCAGAGAAATATAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAAAGAAAGAAGTAAATAGAACATAAAAGCCCAGAGAAATATAAG  835

seq1  TCAATTTAAGCAGCAAGTGAGAATAAAGCAAAAAATCTGCAGAGGCATTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTAAGCAGCAAGTGAGAATAAAGCAAAAAATCTGCAGAGGCATTC  885

seq1  ATAGAGTAGAAATGATCTTAAATCCACAAAAGACACATTCTGGGACGGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTAGAAATGATCTTAAATCCACAAAAGACACATTCTGGGACGGAC  935

seq1  AAAAATGAAGAAAGAGCTCCTGAAAATTTGAAGACATAGTTAAAAAATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAGAAAGAGCTCCTGAAAATTTGAAGACATAGTTAAAAAATAA  985

seq1  TAAAAGGGTTGTAAGAGGAGGAAATTTAACATTTTTAGAAAATCAAGTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGTTGTAAGAGGAGGAAATTTAACATTTTTAGAAAATCAAGTCA  1035

seq1  AAACATTATGTGTAAAGGGAAGAAAATATGTGAAAAATAATAAAATAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTATGTGTAAAGGGAAGAAAATATGTGAAAAATAATAAAATAATC  1085

seq1  AAACAAGCAAGTGCTTAGTCCAGTTAATGGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  AAACAAGCAAGTGCTTAGTCCAGTTAATGGAATTC  1120