BAC Information

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BAC

Clone NameB6Ng01-210I06
Chromosome2 (Build37)
Map Location 64,083,049 - 64,207,910
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667257, Fign
Downstream geneLOC620544, LOC667291, Grb14, Cobll1, LOC383705, 9330158F14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210I06.bB6Ng01-210I06.g
ACCGA028835GA028836
length1,1861,150
definitionB6Ng01-210I06.b B6Ng01-210I06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,083,049 - 64,084,254)(64,206,739 - 64,207,910)
sequence
gaattccatggccattgctcaggtggaagattgggagagctgccatctta
atgatgcctctcagtgggagacacagtttgatgagcctgaatagcctgga
agaatcgacttcaggatagaaagaaagagtatctgagagactcactgctt
tggggggcaatcttgaaatactgagtggttcagcttctttctaattgaat
ttgtgtaattttctgtctctctttaggagagtgtatttcaatttttattt
taaaccctcaactagtatctgtcatttcttaatgctgaagttcattcatt
taattacttttgatactgccaataactacatctcttaattattctctttt
gttctgtaggaaactgatgcagagtttcccttcacatatttccatacttc
tgacactgaattctggggttcttgaagctgtttctactgttttttctcat
cttaacagttcaaggttatgatttgattagagaggttttcatgctatgca
agttaggttgcctttaacctgaagatgctatgtgaggattttgtttaaaa
cattcttaatttctctttccttccatcctttcatctctatcaatctgtct
ctagctatctttttctctctttatttctattatatatgatttatacctat
ctatctatccatctatttatctatatcatccatctatattatgtatatat
atataatctatatctatctatatgtctatactttacctgtgttaggcaca
actcatctgattaaattacataggaaaatattgatcctactaatacaacc
ctgcttgctgttggaattccaaggatctaaatattcctccctgtcttttc
tttgcatgcatcttccatatacacagtaagtgttggaatttataatatat
ataatatatatccagagacctaagagtcctagtgagatctgagccccact
aaatattagaaaatatacatttttttctctttttacagttgttttaattc
tggtgccaaattttgtgatacttgctcagaaaatagtgaatatatttggt
gtcaaagattaatatatatgtttgaaagacagatcaggtaaattgatata
ataagctaaatgaaaaattattattacttatatatttggatccataatca
tacatcacatgtatactcaacaggttgtaggtaccc

gaattcatttttccttgttacatttatttcactaaaattgttcaaactca
caagatattgctaggaggacaccagcaagtgcttcttaattggggcccca
ttcagtagcaaaactgactttgcaggtaccagccacagaggtgatcggga
gtccaggggccctaaatgcgcaggaattaaccttaacacagtaacatcac
cgttctgtctactccgatgtggagtataatcttgaagcctctgtttcaca
tacttgctggagagaggagcttgctctctcatctttcagttgctacatat
gaaaggtttcacgtcctggccttaccagtggattctgctgagcatgctta
gagagataattgctattccccccaaaacactgagagtctctagagaaaac
tagcagccatagagtattaaccagttttcaggaagcccaatggacaggag
aaatgtaggatggatcactctgcctttcaatcccacttcaaattttaatg
agtgagaaaatttttgtatttatgtttaaagtgtgcaacatcttttcttt
atgtatcccccccactcttaatatcatagaatcttattctataattttac
atttgtacatattgagagtcctgtgtacagttccaacttctcatgaattt
taactcaataattaataagggtaaccattaaaaaaataaaatctcacaga
aaaattcccaaagatagtggcatgtcttgctattatttttactgttttat
atcagatctccagtttgctaagaagggaaacaccatccactcaagtttcc
caaaaagcaatagaattattcccattttacagatggggaagtgaaagcta
tgagccatagataggtaaaagagcttcatggaaaaaaaaaaagaaagaaa
aactttttatttttaaaattcaccctttgaaatcaacaacacaaaataat
ccccaagtgttttattgtcccccaaaatgagtttaaaacataaatccaat
atcgaaactggtatgtataggcaatttaggagaaaaataagtgctgtagc
tagcactctacactgttgttgtcagagctctgattgtagtacaagctcac
ctggcataatggacctgagcaacttcagcctgctatggggccaatggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_64083049_64084254
seq2: B6Ng01-210I06.b_44_1229

seq1  GAATTCCATGGCCATTGCTCAGGTGGAAGATTGGGAGAGCTGCCATCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCCATTGCTCAGGTGGAAGATTGGGAGAGCTGCCATCTTA  50

seq1  ATGATGCCTCTCAGTGGGAGACACAGTTTGATGAGCCTGAATAGCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCTCTCAGTGGGAGACACAGTTTGATGAGCCTGAATAGCCTGGA  100

seq1  AGAATCGACTTCAGGATAGAAAGAAAGAGTATCTGAGAGACTCACTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACTTCAGGATAGAAAGAAAGAGTATCTGAGAGACTCACTGCTT  150

seq1  TGGGGGGCAATCTTGAAATACTGAGTGGTTCAGCTTCTTTCTAATTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGCAATCTTGAAATACTGAGTGGTTCAGCTTCTTTCTAATTGAAT  200

seq1  TTGTGTAATTTTCTGTCTCTCTTTAGGAGAGTGTATTTCAATTTTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAATTTTCTGTCTCTCTTTAGGAGAGTGTATTTCAATTTTTATTT  250

seq1  TAAACCCTCAACTAGTATCTGTCATTTCTTAATGCTGAAGTTCATTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTCAACTAGTATCTGTCATTTCTTAATGCTGAAGTTCATTCATT  300

seq1  TAATTACTTTTGATACTGCCAATAACTACATCTCTTAATTATTCTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTTTGATACTGCCAATAACTACATCTCTTAATTATTCTCTTTT  350

seq1  GTTCTGTAGGAAACTGATGCAGAGTTTCCCTTCACATATTTCCATACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTAGGAAACTGATGCAGAGTTTCCCTTCACATATTTCCATACTTC  400

seq1  TGACACTGAATTCTGGGGTTCTTGAAGCTGTTTCTACTGTTTTTTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGAATTCTGGGGTTCTTGAAGCTGTTTCTACTGTTTTTTCTCAT  450

seq1  CTTAACAGTTCAAGGTTATGATTTGATTAGAGAGGTTTTCATGCTATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGTTCAAGGTTATGATTTGATTAGAGAGGTTTTCATGCTATGCA  500

seq1  AGTTAGGTTGCCTTTAACCTGAAGATGCTATGTGAGGATTTTGTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGTTGCCTTTAACCTGAAGATGCTATGTGAGGATTTTGTTTAAAA  550

seq1  CATTCTTAATTTCTCTTTCCTTCCATCCTTTCATCTCTATCAATCTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTAATTTCTCTTTCCTTCCATCCTTTCATCTCTATCAATCTGTCT  600

seq1  CTAGCTATCTTTTTCTCTCTTTATTTCTATTATATATGATTTATACCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTATCTTTTTCTCTCTTTATTTCTATTATATATGATTTATACCTAT  650

seq1  CTATCTATCCATCTATTTATCTATATCATCCATCTATATTATGTATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCCATCTATTTATCTATATCATCCATCTATATTATGTATATAT  700

seq1  ATATAATCTATATCTATCTATATGTCTATACTTTACCTGTGTTAGGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTATATCTATCTATATGTCTATACTTTACCTGTGTTAGGCACA  750

seq1  ACTCATCTGATTAAATTACATAGGAAAATATTGATCCTACTAATACAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTGATTAAATTACATAGGAAAATATTGATCCTACTAATACAACC  800

seq1  CTGCTTGCTGTTGGAATTCCAAGGATCTAAATATTCCTCCCTGTCTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCTGTTGGAATTCCAAGGATCTAAATATTCCTCCCTGTCTTTTC  850

seq1  TTTGCATGCATCTTCCATATACACAGTAAGTGTTGGAATTTATAATATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGCATCTTCCATATACACAGTAAGTGTTGGAATTTATAATATAT  900

seq1  ATAATATATATCCAGAGACCTAAGAGTCCTAGTGAGATCTGAGCCCCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATATCCAGAGACCTAAGAGTCCTAGTGAGATCTGAGCCCCACT  950

seq1  AAATATTAGAAAATATACATTTTTTTCTCTTTTTACAGTTGTTTTAATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGAAAATATACATTTTTTTCTCTTTTTACAGTTGTTTTAATTC  1000

seq1  TTGGTGCCAAATTTTGTGATACTTGCTCAAGAAAAATAGTGAAATATATT  1050
       ||||||||||||||||||||||||||||   ||||||||| ||||||||
seq2  -TGGTGCCAAATTTTGTGATACTTGCTCA--GAAAATAGTG-AATATATT  1046

seq1  TGGTGTTCAAAGATTAATATATAATGTTTGAAAGGACAGATCAAGTAATT  1100
      ||||| |||||||||||||||| |||||||||| ||||||||| |||| |
seq2  TGGTG-TCAAAGATTAATATAT-ATGTTTGAAA-GACAGATCAGGTAAAT  1093

seq1  TGAATTAATAATAAAGGCTTATATTGAAAAATTAATTATTAC-TATATAT  1149
      |||  ||||||     |||   | ||||||||| |||||||| |||||||
seq2  TGATATAATAA-----GCT--AAATGAAAAATT-ATTATTACTTATATAT  1135

seq1  TTGGGATCCATAAATCAATACAATCAACATGTATACTCAAACAGGTTGTA  1199
      || |||||||| |||| |||| ||| |||||||||||| |||||||||||
seq2  TT-GGATCCAT-AATC-ATAC-ATC-ACATGTATACTC-AACAGGTTGTA  1179

seq1  GGTACCC  1206
      |||||||
seq2  GGTACCC  1186


seq1: chr2_64206739_64207910
seq2: B6Ng01-210I06.g_62_1211 (reverse)

seq1  GCCCCAAATTGCCCCATTAGCAAGGCCTGAAGTTGCCCCTCAGGGTCAAT  50
      |||||  |||| |||  |||||  | |||||||||   ||||||  ||  
seq2  GCCCC--ATTGGCCCCATAGCA--GGCTGAAGTTG---CTCAGGTCCA--  41

seq1  ATTTAATGCAGGTGAGCTTGGGTTAACTACCATCAGGAGCCTCTGGACAA  100
        |||   ||||||||||||     ||||| |||| ||| |||| |||||
seq2  --TTATGCCAGGTGAGCTTG----TACTACAATCA-GAG-CTCT-GACAA  82

seq1  CAAACAGTGTAGAGTGCTAGCTACAGGCAAATTTATTTTCTCCCTAAATT  150
      | ||||||||||||||||||||||||    | |||||||   ||||||||
seq2  C-AACAGTGTAGAGTGCTAGCTACAG---CACTTATTTTTCTCCTAAATT  128

seq1  TGCCCTATAACATACCAGTTTCGATATTGGATTTATGTTTTAAACTCATT  200
         ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  --GCCTAT-ACATACCAGTTTCGATATTGGATTTATGTTTTAAACTCATT  175

seq1  TT-GGGGACAAT-AAACACTTGGGGATTATTTTGTGTTGTTGATTTCAAA  248
      || ||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  TTGGGGGACAATAAAACACTTGGGGATTATTTTGTGTTGTTGATTTC-AA  224

seq1  AGGGTGAATTTTAAAA--TAAAAGTTTTTCTTTCTTTTTTTTTTTCCATG  296
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  AGGGTGAATTTTAAAAATAAAAAGTTTTTCTTTCTTTTTTTTTTTCCATG  274

seq1  AAGCTCTTTTACCTATCTATGGCTCATAGCTTTCACTTCCCCATCTGTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTTTACCTATCTATGGCTCATAGCTTTCACTTCCCCATCTGTAA  324

seq1  AATGGGAATAATTCTATTGCTTTTTGGGAAACTTGAGTGGATGGTGTTTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAATAATTCTATTGCTTTTTGGGAAACTTGAGTGGATGGTGTTTC  374

seq1  CCTTCTTAGCAAACTGGAGATCTGATATAAAACAGTAAAAATAATAGCAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTAGCAAACTGGAGATCTGATATAAAACAGTAAAAATAATAGCAA  424

seq1  GACATGCCACTATCTTTGGGAATTTTTCTGTGAGATTTTATTTTTTTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCCACTATCTTTGGGAATTTTTCTGTGAGATTTTATTTTTTTAAT  474

seq1  GGTTACCCTTATTAATTATTGAGTTAAAATTCATGAGAAGTTGGAACTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACCCTTATTAATTATTGAGTTAAAATTCATGAGAAGTTGGAACTGT  524

seq1  ACACAGGACTCTCAATATGTACAAATGTAAAATTATAGAATAAGATTCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGACTCTCAATATGTACAAATGTAAAATTATAGAATAAGATTCTA  574

seq1  TGATATTAAGAGTGGGGGGGATACATAAAGAAAAGATGTTGCACACTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAGAGTGGGGGGGATACATAAAGAAAAGATGTTGCACACTTTA  624

seq1  AACATAAATACAAAAATTTTCTCACTCATTAAAATTTGAAGTGGGATTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAATACAAAAATTTTCTCACTCATTAAAATTTGAAGTGGGATTGA  674

seq1  AAGGCAGAGTGATCCATCCTACATTTCTCCTGTCCATTGGGCTTCCTGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGTGATCCATCCTACATTTCTCCTGTCCATTGGGCTTCCTGAA  724

seq1  AACTGGTTAATACTCTATGGCTGCTAGTTTTCTCTAGAGACTCTCAGTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTAATACTCTATGGCTGCTAGTTTTCTCTAGAGACTCTCAGTGT  774

seq1  TTTGGGGGGAATAGCAATTATCTCTCTAAGCATGCTCAGCAGAATCCACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGAATAGCAATTATCTCTCTAAGCATGCTCAGCAGAATCCACT  824

seq1  GGTAAGGCCAGGACGTGAAACCTTTCATATGTAGCAACTGAAAGATGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGCCAGGACGTGAAACCTTTCATATGTAGCAACTGAAAGATGAGA  874

seq1  GAGCAAGCTCCTCTCTCCAGCAAGTATGTGAAACAGAGGCTTCAAGATTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCTCCTCTCTCCAGCAAGTATGTGAAACAGAGGCTTCAAGATTA  924

seq1  TACTCCACATCGGAGTAGACAGAACGGTGATGTTACTGTGTTAAGGTTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCACATCGGAGTAGACAGAACGGTGATGTTACTGTGTTAAGGTTAA  974

seq1  TTCCTGCGCATTTAGGGCCCCTGGACTCCCGATCACCTCTGTGGCTGGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCGCATTTAGGGCCCCTGGACTCCCGATCACCTCTGTGGCTGGTA  1024

seq1  CCTGCAAAGTCAGTTTTGCTACTGAATGGGGCCCCAATTAAGAAGCACTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAAGTCAGTTTTGCTACTGAATGGGGCCCCAATTAAGAAGCACTT  1074

seq1  GCTGGTGTCCTCCTAGCAATATCTTGTGAGTTTGAACAATTTTAGTGAAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGTCCTCCTAGCAATATCTTGTGAGTTTGAACAATTTTAGTGAAA  1124

seq1  TAAATGTAACAAGGAAAAATGAATTC  1172
      ||||||||||||||||||||||||||
seq2  TAAATGTAACAAGGAAAAATGAATTC  1150


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