BAC Information

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BAC

Clone NameB6Ng01-211G13
Chromosome2 (Build37)
Map Location 12,626,413 - 12,627,510
singlet/doubletsinglet
Overlap genenone
Upstream geneIl15ra, Fbxo18, Ankrd16, EG635919, LOC667247, Itga8, 2310047O13Rik
Downstream geneLOC100040837, Pter, C1ql3, Rsu1, Cubn, Trdmt1, Vim, St8sia6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211G13.bB6Ng01-211G13.g
ACCGA029483GA029484
length8001,119
definitionB6Ng01-211G13.b B6Ng01-211G13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacagggaacatgatctggtattgggttggggggaagtactga
agtcctgagggccatcagaaagaatggaaaaacaggcaacttcaggaggt
aggaggttgggaggaccatccagaatataccagatacctgggagatgagt
gactctcaggactcaaagggagggaccttagatgaaatgttctacagagg
ggagagggaacttagagcccacctccagcagaaagacagggcatcaagtg
agggatggggttgccatcctacagtcaaaactctgacccataattattcc
tgtctgaaagaattacagggatggaaatgaacctgaggaaaagaaggtcc
aatgaaaagcccaaagtgagatccaagtcaaggggaggtctcaaggcctg
acactattactgaggctatggagcgctcacaaaaagggacctatcctgag
tgccctccaaaagacccaacaagctgctgaaagagtcagatgcagatact
tgcacccaaccaataggtagaagctgctgacccctgtggatgaattaggg
aaaagctggaagaagctgaggaggagagagaccctataaggaggaccagc
agtctcaattaacctggatccccgagatctctcagacactggacgagcaa
acaggcagtgtacaccagctgatatgaggtccccaacacatatacagcag
aggactgccgggtctgggttcagtcagagaagatgcacctaaccctcaag
agactggagggcccacagagtttagatgtctggtggggtgggtggggtgt

gaattccattctgtaggtagccttgtcactgtagcttcaaagtgggctgg
tgagaaaaaatatttgaggggaactatgacagaggcctttgatctacaat
ttgagataaacctcttggtagaattcttcgtgcttccagccctgccatgg
aaaagcgtaggagcttcctattcttccaaacaaaaccaatctccacatac
aagagactcaacccccaccacaccactcagatttatttatatgaattcaa
aaaaagtgggtatgtcggatctcattttaggatttcaaatatgattgatg
tgacagtggaaccctaggaaaacagctcagtgggaaagaagaatatttgt
tacaaagacaatgtggcctgagtaaattgtgtgggtgagttcgtgcggtg
aggagagcaaagcagatgctagaggaaaaataccttgaacagaaacaaaa
gtaccaggaaaagtggcagtaaaaacctcccaaatgtttatagactcaca
aaacctcttttcaatggcttccaacataattaggtgtggcttgtagaaat
tccccagagtgttggtaaacttcatctaaaagcacctatgaccaaattac
tgaattcattttctcactgacccctgaaagctttatgatactatttcatt
aataccactagtaaacagaagggagtcagtgtgctgcaggtggaagagtg
gatgattaccaatctaggagagtccagacatgatcagcatttttttgtaa
gttttaagcctgtgacctaatactagggaggctgtgaccagaggatcagg
agtatggccagcatggactgcatagcaagacccagtttccatgcataaat
aaataagggaaaattcaacaaggctactgagccctctgcccctttgtctt
cggaacaagtgtcacaacccgtgagtctcagctttctgatcttgggaatg
agcacagccagtacttcatctttgatatgcattctggggatatttttggt
aaaaaaatatctatcaaattcttcttaaggcttaccctaagagcccatga
acacctgtgaatcaaggagaaccttgtagaaacaacccagagaatttatt
agaaatcacaaatgagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_12626413_12627510
seq2: B6Ng01-211G13.g_68_1186

seq1  GAATTCCATTCTGTAGGTAGCCTTGTCACTGTAGCTTCAAAGTGGGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTGTAGGTAGCCTTGTCACTGTAGCTTCAAAGTGGGCTGG  50

seq1  TGAGAAAAAATATTTGAGGGGAACTATGACAGAGGCCTTTGATCTACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAAATATTTGAGGGGAACTATGACAGAGGCCTTTGATCTACAAT  100

seq1  TTGAGATAAACCTCTTGGTAGAATTCTTCGTGCTTCCAGCCCTGCCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAAACCTCTTGGTAGAATTCTTCGTGCTTCCAGCCCTGCCATGG  150

seq1  AAAAGCGTAGGAGCTTCCTATTCTTCCAAACAAAACCAATCTCCACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCGTAGGAGCTTCCTATTCTTCCAAACAAAACCAATCTCCACATAC  200

seq1  AAGAGACTCAACCCCCACCACACCACTCAGATTTATTTATATGAATTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTCAACCCCCACCACACCACTCAGATTTATTTATATGAATTCAA  250

seq1  AAAAAGTGGGTATGTCGGATCTCATTTTAGGATTTCAAATATGATTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGGTATGTCGGATCTCATTTTAGGATTTCAAATATGATTGATG  300

seq1  TGACAGTGGAACCCTAGGAAAACAGCTCAGTGGGAAAGAAGAATATTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTGGAACCCTAGGAAAACAGCTCAGTGGGAAAGAAGAATATTTGT  350

seq1  TACAAAGACAATGTGGCCTGAGTAAATTGTGTGGGTGAGTTCGTGCGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGACAATGTGGCCTGAGTAAATTGTGTGGGTGAGTTCGTGCGGTG  400

seq1  AGGAGAGCAAAGCAGATGCTAGAGGAAAAATACCTTGAACAGAAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGCAAAGCAGATGCTAGAGGAAAAATACCTTGAACAGAAACAAAA  450

seq1  GTACCAGGAAAAGTGGCAGTAAAAACCTCCCAAATGTTTATAGACTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGGAAAAGTGGCAGTAAAAACCTCCCAAATGTTTATAGACTCACA  500

seq1  AAACCTCTTTTCAATGGCTTCCAACATAATTAGGTGTGGCTTGTAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTTTTCAATGGCTTCCAACATAATTAGGTGTGGCTTGTAGAAAT  550

seq1  TCCCCAGAGTGTTGGTAAACTTCATCTAAAAGCACCTATGACCAAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGAGTGTTGGTAAACTTCATCTAAAAGCACCTATGACCAAATTAC  600

seq1  TGAATTCATTTTCTCACTGACCCCTGAAAGCTTTATGATACTATTTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCATTTTCTCACTGACCCCTGAAAGCTTTATGATACTATTTCATT  650

seq1  AATACCACTAGTAAACAGAAGGGAGTCAGTGTGCTGCAGGTGGAAGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCACTAGTAAACAGAAGGGAGTCAGTGTGCTGCAGGTGGAAGAGTG  700

seq1  GATGATTACCAATCTAGGAGAGTCCAGACATGATCAGCATTTTTTTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTACCAATCTAGGAGAGTCCAGACATGATCAGCATTTTTTTGTAA  750

seq1  GTTTTAAGCCTGTGACCTAATACTAGGGAGGCTGTGACCAGAGGATCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGCCTGTGACCTAATACTAGGGAGGCTGTGACCAGAGGATCAGG  800

seq1  AGTATGGCCAGCATGGACTGCATAGCAAGACCCAGTTTCCATGCATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGCCAGCATGGACTGCATAGCAAGACCCAGTTTCCATGCATAAAT  850

seq1  AAATAAGGG-AAATTCAACAAGGCTACTGAG-CCTCTGCCCC-TTGTCTT  897
      ||||||||| ||||||||||||||||||||| |||||||||| |||||||
seq2  AAATAAGGGAAAATTCAACAAGGCTACTGAGCCCTCTGCCCCTTTGTCTT  900

seq1  CGG-ACAAGTGTCACAACCCGTGAGTCTCAGC-TTCTGATCTT-GGAATG  944
      ||| |||||||||||||||||||||||||||| |||||||||| ||||||
seq2  CGGAACAAGTGTCACAACCCGTGAGTCTCAGCTTTCTGATCTTGGGAATG  950

seq1  AGCACAG-CAGTACTTCATC-TTGATA-GCATTCTGGGGATA-TTTTGGT  990
      ||||||| |||||||||||| |||||| |||||||||||||| |||||||
seq2  AGCACAGCCAGTACTTCATCTTTGATATGCATTCTGGGGATATTTTTGGT  1000

seq1  -AAAAGATATCTATC-AATTC-TCTTAAGGC-TACCCTAGAGGCCCATGA  1036
       |||| ||||||||| ||||| ||||||||| |||||||   ||||||||
seq2  AAAAAAATATCTATCAAATTCTTCTTAAGGCTTACCCTAAGAGCCCATGA  1050

seq1  ACACCGGTG-ATC-AGGAGA--CCTGGAG-AACAACCAGGAGAATTTAAT  1081
      ||||| ||| ||| ||||||  | || || |||||||  |||||||| ||
seq2  ACACCTGTGAATCAAGGAGAACCTTGTAGAAACAACCCAGAGAATTT-AT  1099

seq1  TAG--ATCAC-AATGAGATA  1098
      |||  ||||| |||||||||
seq2  TAGAAATCACAAATGAGATA  1119