BAC Information

Click to search

BAC

Clone NameB6Ng01-211H21
Chromosome2 (Build37)
Map Location 134,412,749 - 134,413,801
singlet/doubletsinglet
Overlap genenone
Upstream geneHao1
Downstream geneTxndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H21.bB6Ng01-211H21.g
ACCGA029547GA029548
length1,2181,051
definitionB6Ng01-211H21.b B6Ng01-211H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcataccagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaagagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagacagccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtgggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaccct
ataggtggaacaacattatgaactaaccagtaccccggagctcttgactc
tagctgcatatatattcaaaagatggcctagtcggccatcactgggaaag
aggaggccatggacttgcaactttatattgcccagttacaggggaaacca
tcagtcataggggaattgttgggcaaggggaaggtggggcgtaagctaat
catcggcacccagatcat
gaattctttttgcttgagtcttggatcttttatctcttccttctcttttc
ccccatgtcaatttttctttctctacacaactcctgcttttctgttgggt
gtcttttcatctttcattttcttttctctttttttttttttctgacccaa
ctgctcgaaagatgaatgataatgtttgtaagagggaaataataaaagca
ggaaggaagcaatgagcatttaaatggagaggagaactgccagatgtgcc
attcagtgtccttcctgtcaccttgcagtggaggaggaatagatttccaa
gatactgctgttgctgcatactgtactgggtttttggcttacaactgcca
aatcctttccttccttgcttttttccttccttccttcctttttctttact
ttcttctctttattctttctatttttcttcctttcttattcacctccctc
tctccttccttccttcttctctttaatttggatgctttaagtctttagca
taaaactggaaacaaaacacagtttttttctttattttgcacaatattta
aaagatttttgctgcgtgttcatatgttatgtgtccatgagagtggagga
cagaggttaattctgggtattaacctctggtaattcctcagctctgcact
atacttgtagtttctcagggtctcttatttcagcttgcttggtgttatag
ttacaggtgtgtcttccatgtgcgtgctgcggatcactccattcaccgag
ccgtttttccagctctgaaacatttacatttgagtaaagcctgttccgag
gaaatcccaggtggaagagctaacccccaccaggttccatcacgtctgct
caagagtgatgcgcttggaaagttgtgtgtggatttctccaacatgggaa
gaactcccctccttccatccctgcacctttcacagtgcctcgaagagtga
cacaatggttcttcgactttttctctctatgcatttcatatgctatacta
cttcagccccactgtattctgagcatcattattagtctctagctaggaga
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134412749_134413801
seq2: B6Ng01-211H21.g_63_1113 (reverse)

seq1  GTCTCCTTAGCTAGAGACT-ATTATGATGCTCAGAATACAGTGGGGCTGG  49
      |||||| |||||||||||| || |||||||||||||||||||||||||| 
seq2  GTCTCC-TAGCTAGAGACTAATAATGATGCTCAGAATACAGTGGGGCTGA  49

seq1  AGTAGGTATAGCATATGAAAATGCATAGAGAGAAAAGTCCGAAGAACCAT  99
      |||| |||||||||||| ||||||||||||||||||   |||||||||||
seq2  AGTA-GTATAGCATATG-AAATGCATAGAGAGAAAAAGTCGAAGAACCAT  97

seq1  TGTGTCCACTCTTCGAGGCACTGGTGAAGGTGCAGGGATGGAAGGAGGGG  149
      ||||| |||||||||||||||||   ||||||||||||||||||||||||
seq2  TGTGT-CACTCTTCGAGGCACTGTGAAAGGTGCAGGGATGGAAGGAGGGG  146

seq1  AGTTCTTTCCCATGTTGGAGAAATCCACACACAAC-TTCCAAGCGCATCA  198
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTTC-TTCCCATGTTGGAGAAATCCACACACAACTTTCCAAGCGCATCA  195

seq1  CTCTTGAGCAGACGTGATGGAACCTGGT-GGGGTTAGCTCTTCCACCTGG  247
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCTTGAGCAGACGTGATGGAACCTGGTGGGGGTTAGCTCTTCCACCTGG  245

seq1  GATTTCCTCGGAACAGGCTTTACTCAAATGTAAATGTTTCAGAGCTGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTCGGAACAGGCTTTACTCAAATGTAAATGTTTCAGAGCTGGAA  295

seq1  AAACGGCTCGGTGAATGGAGTGATCCGCAGCACGCACATGGAAGACACAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGCTCGGTGAATGGAGTGATCCGCAGCACGCACATGGAAGACACAC  345

seq1  CTGTAACTATAACACCAAGCAAGCTGAAATAAGAGACCCTGAGAAACTAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTATAACACCAAGCAAGCTGAAATAAGAGACCCTGAGAAACTAC  395

seq1  AAGTATAGTGCAGAGCTGAGGAATTACCAGAGGTTAATACCCAGAATTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAGTGCAGAGCTGAGGAATTACCAGAGGTTAATACCCAGAATTAA  445

seq1  CCTCTGTCCTCCACTCTCATGGACACATAACATATGAACACGCAGCAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCCTCCACTCTCATGGACACATAACATATGAACACGCAGCAAAA  495

seq1  ATCTTTTAAATATTGTGCAAAATAAAGAAAAAAACTGTGTTTTGTTTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAAATATTGTGCAAAATAAAGAAAAAAACTGTGTTTTGTTTCCA  545

seq1  GTTTTATGCTAAAGACTTAAAGCATCCAAATTAAAGAGAAGAAGGAAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGCTAAAGACTTAAAGCATCCAAATTAAAGAGAAGAAGGAAGGA  595

seq1  AGGAGAGAGGGAGGTGAATAAGAAAGGAAGAAAAATAGAAAGAATAAAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGGGAGGTGAATAAGAAAGGAAGAAAAATAGAAAGAATAAAGA  645

seq1  GAAGAAAGTAAAGAAAAAGGAAGGAAGGAAGGAAAAAAGCAAGGAAGGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGTAAAGAAAAAGGAAGGAAGGAAGGAAAAAAGCAAGGAAGGAA  695

seq1  AGGATTTGGCAGTTGTAAGCCAAAAACCCAGTACAGTATGCAGCAACAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGGCAGTTGTAAGCCAAAAACCCAGTACAGTATGCAGCAACAGC  745

seq1  AGTATCTTGGAAATCTATTCCTCCTCCACTGCAAGGTGACAGGAAGGACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTTGGAAATCTATTCCTCCTCCACTGCAAGGTGACAGGAAGGACA  795

seq1  CTGAATGGCACATCTGGCAGTTCTCCTCTCCATTTAAATGCTCATTGCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGCACATCTGGCAGTTCTCCTCTCCATTTAAATGCTCATTGCTT  845

seq1  CCTTCCTGCTTTTATTATTTCCCTCTTACAAACATTATCATTCATCTTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGCTTTTATTATTTCCCTCTTACAAACATTATCATTCATCTTTC  895

seq1  GAGCAGTTGGGTCAGAAAAAAAAAAAAAGAGAAAAGAAAATGAAAGATGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTGGGTCAGAAAAAAAAAAAAAGAGAAAAGAAAATGAAAGATGA  945

seq1  AAAGACACCCAACAGAAAAGCAGGAGTTGTGTAGAGAAAGAAAAATTGAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACCCAACAGAAAAGCAGGAGTTGTGTAGAGAAAGAAAAATTGAC  995

seq1  ATGGGGGAAAAGAGAAGGAAGAGATAAAAGATCCAAGACTCAAGCAAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGAAAAGAGAAGGAAGAGATAAAAGATCCAAGACTCAAGCAAAAA  1045

seq1  GAATTC  1053
      ||||||
seq2  GAATTC  1051