BAC Information

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BAC

Clone NameB6Ng01-211K23
Chromosome2 (Build37)
Map Location 64,882,336 - 65,020,340
singlet/doubletdoublet
Overlap geneCobll1
Upstream geneFign, LOC620544, LOC667291, Grb14
Downstream geneLOC383705, 9330158F14Rik, Scn3a, Scn2a1, A330102K23Rik, Galnt3, LOC620893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211K23.bB6Ng01-211K23.g
ACCGA029680GA029681
length1,059200
definitionB6Ng01-211K23.b B6Ng01-211K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,019,284 - 65,020,340)(64,882,336 - 64,882,535)
sequence
gaattcacagggtcagctccacgccatcattcatgtgggtgtggtatttc
catataccagcattactaatgagtaagaaacacggactgaagaaatatat
atgtgtgttataccccagaggttttaaaatgtagttagaagttcagaatg
caaacacaaagtccacaacgaggatgagtaagggactcatgtgtacatga
gctgcgatgataggactcagtttaaagatctcagagtcctctcgagagta
taaaatacacaaaactaagcagctttgttttgtttgttacattcacatga
atgcacgtaagatctcagtgctgtgaggctcgtgggatgagagaaattat
tgtgacgtgaggagagaaactcgttactagtaaactggtggaatcctttt
gccccacccagctaggaattatgggtagatgaggagaaactttttctgat
actgagaaagtgcccaaggcttaggggcctggcctggaaaagacccagag
gcatctagcccagagccctttagaaaccagaggctccaggctctcgagtc
agaggcttactgcaatgggattcaataaccagtgccccctttctccacgc
agactgggcaacttatgtcactcttgacttggagacagcagcaaggagca
gcaggtgccacctgcttgtattaagagtgttcagacagaccttgggttcg
ggagagcaggctctatgttgttggaacatcagagcctagggtatttgtgg
cccttgggtgtgacatctctggaactctctcagtgacccagtccacagtg
tctctttctctagctctttgcagccttctttctccagcttcaatttcctg
tcttcttttgacttcctttctactcccagtctccctttgtccctattgcc
tctgttctttgttagcgccctcccccatcacgcttttccactcttcagcc
cctcctccccactaaccttgtgttcactgcagccttcttccgtcacagtg
ctgttacatttcccccgtttttctggtgtcagccagctctgctaatgaat
aatccgtga

caagtcaacctaggctacacagctagactgtctgtctgtctgtctgtctg
tctctccttctctctctctctctctctctctctctctctctctctcgaca
ggaaaaagaaaagaaataaattaatatgttcacaatttgcagatcaggaa
aaagaaaggaaggaaggagacagagagtcagagagagggagggaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_65019284_65020340
seq2: B6Ng01-211K23.b_48_1106 (reverse)

seq1  TCAC-GATTA-TCATTAGCAGAGCTGGCTGACA-CAGAAAAACGGGGGAA  47
      |||| ||||| |||||||||||||||||||||| ||||||||||||||||
seq2  TCACGGATTATTCATTAGCAGAGCTGGCTGACACCAGAAAAACGGGGGAA  50

seq1  ATGTTAACAGCACTGTGACGGAAG-AGGCTGCAGTGAACACAAGGTTAGT  96
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATG-TAACAGCACTGTGACGGAAGAAGGCTGCAGTGAACACAAGGTTAGT  99

seq1  GGGGAGGAGGGGCTGAAGAGTGGAAAAGCGTGATGGGGGAGGGGCGCTAA  146
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGGAGGAGGGGCTGAAGAGTGGAAAAGCGTGATGGGGGA-GGGCGCTAA  148

seq1  CAAAGAACAGAGGCAATAGGGACAAAGGGAGACTGGGAGTAGAAAGGAAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAACAGAGGCAATAGGGACAAAGGGAGACTGGGAGTAGAAAGGAAG  198

seq1  TCAAAAGAAGACAGGAAATTGAAGCTGGAGAAAGAAGGCTGCAAAGAGCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAAGACAGGAAATTGAAGCTGGAGAAAGAAGGCTGCAAAGAGCT  248

seq1  AGAGAAAGAGACACTGTGGACTGGGTCACTGAGAGAGTTCCAGAGATGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAGACACTGTGGACTGGGTCACTGAGAGAGTTCCAGAGATGTC  298

seq1  ACACCCAAGGGCCACAAATACCCTAGGCTCTGATGTTCCAACAACATAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAAGGGCCACAAATACCCTAGGCTCTGATGTTCCAACAACATAGA  348

seq1  GCCTGCTCTCCCGAACCCAAGGTCTGTCTGAACACTCTTAATACAAGCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCTCCCGAACCCAAGGTCTGTCTGAACACTCTTAATACAAGCAG  398

seq1  GTGGCACCTGCTGCTCCTTGCTGCTGTCTCCAAGTCAAGAGTGACATAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACCTGCTGCTCCTTGCTGCTGTCTCCAAGTCAAGAGTGACATAAG  448

seq1  TTGCCCAGTCTGCGTGGAGAAAGGGGGCACTGGTTATTGAATCCCATTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAGTCTGCGTGGAGAAAGGGGGCACTGGTTATTGAATCCCATTGC  498

seq1  AGTAAGCCTCTGACTCGAGAGCCTGGAGCCTCTGGTTTCTAAAGGGCTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCTCTGACTCGAGAGCCTGGAGCCTCTGGTTTCTAAAGGGCTCT  548

seq1  GGGCTAGATGCCTCTGGGTCTTTTCCAGGCCAGGCCCCTAAGCCTTGGGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGATGCCTCTGGGTCTTTTCCAGGCCAGGCCCCTAAGCCTTGGGC  598

seq1  ACTTTCTCAGTATCAGAAAAAGTTTCTCCTCATCTACCCATAATTCCTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCAGTATCAGAAAAAGTTTCTCCTCATCTACCCATAATTCCTAG  648

seq1  CTGGGTGGGGCAAAAGGATTCCACCAGTTTACTAGTAACGAGTTTCTCTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGGGCAAAAGGATTCCACCAGTTTACTAGTAACGAGTTTCTCTC  698

seq1  CTCACGTCACAATAATTTCTCTCATCCCACGAGCCTCACAGCACTGAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGTCACAATAATTTCTCTCATCCCACGAGCCTCACAGCACTGAGAT  748

seq1  CTTACGTGCATTCATGTGAATGTAACAAACAAAACAAAGCTGCTTAGTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGTGCATTCATGTGAATGTAACAAACAAAACAAAGCTGCTTAGTTT  798

seq1  TGTGTATTTTATACTCTCGAGAGGACTCTGAGATCTTTAAACTGAGTCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTTATACTCTCGAGAGGACTCTGAGATCTTTAAACTGAGTCCT  848

seq1  ATCATCGCAGCTCATGTACACATGAGTCCCTTACTCATCCTCGTTGTGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCGCAGCTCATGTACACATGAGTCCCTTACTCATCCTCGTTGTGGA  898

seq1  CTTTGTGTTTGCATTCTGAACTTCTAACTACATTTTAAAACCTCTGGGGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTTGCATTCTGAACTTCTAACTACATTTTAAAACCTCTGGGGT  948

seq1  ATAACACACATATATATTTCTTCAGTCCGTGTTTCTTACTCATTAGTAAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACACATATATATTTCTTCAGTCCGTGTTTCTTACTCATTAGTAAT  998

seq1  GCTGGTATATGGAAATACCACACCCACATGAATGATGGCGTGGAGCTGAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTATATGGAAATACCACACCCACATGAATGATGGCGTGGAGCTGAC  1048

seq1  CCTGTGAATTC  1057
      |||||||||||
seq2  CCTGTGAATTC  1059


seq1: chr2_64882336_64882535
seq2: B6Ng01-211K23.g_70_269

seq1  CAAGTCAACCTAGGCTACACAGCTAGACTGTCTGTCTGTCTGTCTGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAACCTAGGCTACACAGCTAGACTGTCTGTCTGTCTGTCTGTCTG  50

seq1  TCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACA  100

seq1  GGAAAAAGAAAAGAAATAAATTAATATGTTCACAATTTGCAGATCAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAAAAGAAATAAATTAATATGTTCACAATTTGCAGATCAGGAA  150

seq1  AAAGAAAGGAAGGAAGGAGACAGAGAGTCAGAGAGAGGGAGGGAGGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGGAAGGAAGGAGACAGAGAGTCAGAGAGAGGGAGGGAGGAAGG  200


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