BAC Information

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BAC

Clone NameB6Ng01-212O02
Chromosome2 (Build37)
Map Location 141,638,254 - 141,790,784
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212O02.bB6Ng01-212O02.g
ACCGA030562GA030563
length9731,188
definitionB6Ng01-212O02.b B6Ng01-212O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,638,254 - 141,639,217)(141,789,599 - 141,790,784)
sequence
ggaattctctaacctaggtctgtctctaagcttattttttgatttcgtat
cattttctcatgtacatctggggcattgtagaaaatttaggtcgttttgc
ttcagtaacatgctagtcatggcaacattaaatatatctttgctggttac
cttttaagaacttcctgttttaatatatacaaaagtgtgtcaacaagtta
atttggacgcagctcattttactgaaataataaactataagtgactatag
ataaaagctatgtaaactgattattcagttgcagtttgatgtagggtttg
ctctgattatcgaaacaaataggctaaagatgtgggaaagaatgttgctt
ccaaaacacttgtcttcctgttgcagtgttgttttgacatcttgactctt
tcagtgagttattcaattcttcattcacttgataaatatttactgaaatc
cactaggcacatttctacctgggacaaagcactgaaagacaaacaaatca
tccctgtgttttgatagtcatagtctgtgaagagagaagcaaattaagca
aataaagaaataagacagcccaaagagttctttatgaaatcaagcattat
aactacatagtggattatgaggacatgtggctttagaacccaccaagact
cttctgaggctatgacctttggagggatgctcacagtaatctataagatg
gaacacaggtcccccaatggagatgctagagaaagcacccaaggagctga
aggggtctgcaaccctataggtggaacaacaatatgaactaaccagtacc
cccagagctcatgtctctagctgcatatgtagcagaagatggcctagtcg
gccttcactgtgaagagaggcccctttagtattgcaaagtttatatgccc
ccagtacaggggaatggccagggccaagaagcaggaattgggttgggtag
ggtgagcagggtagggagggggg

gaattctccattgacctaacttcatgttgctgagacaatgagtggataaa
aaaggggtttttaagagagtgagaccacctggtgtaatgcatacatgact
gcatgaactagagtgggcattatttagatagtgcagccccagtgagtatc
atgtaaaatattactagaaagagtattaggcaatatatgtatatatatat
aaaataggtttttgaatgacaaataatacttccaaaagctatgcctgcca
ttatgcagcatgtgtatgtgatttcaaaattagcttgcctgctgttacct
cttaatccaatggagtgtaacaaagctgaaggaagaagtacaatgcatta
aatacatgtttcttcaaaataaaagatgagccatgcttttcgtttggtcc
cagcatcacatatacatttacatggtttgttttattagttctggctcact
ttctatacccaagagaatctacttaactttcaagatattttccttaggga
aatgatttcttgctacttatttttcttatgttaaaagatttctatactga
gtttctataatattcatctttcctctacaaattccttttctctttctctg
tttaaaaaaaataaataaaattcatagagtgtactgttcacatggaagat
gaggcagtgagctttgtgcccttcatggaaaatgatcagttttgcagtaa
aaacctccctaaatcatttctttgaagcatcttccacatatatctcatta
cttccagaatccctgaaaatgctcagataattggagaaaaatgacatggc
agaatacattactatgatcctttgtgaagaccctgaaacacagaagcaat
aggaaaattttgcattcaccccaagaggcacaggtctctttaataattca
aggattctcttgcctgtgggtcacaagtagtaatgtcaccctcttggtga
taacatacagcattccaatgctacagttgctttgtggattattgccaaaa
ctatttcttgttcactgttaaccattctgggactctagagcctcactatg
gaacgaaaagagcagcaggatggaggttaacatccttgcttatatcttac
aatgatcttcttcttaatctaactcaaggtgaggtactcttccaagcttc
aatgaggctgtggtttcaacaggtcctctgtttcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141638254_141639217
seq2: B6Ng01-212O02.b_46_1017

seq1  GAATTCTCTAACCTA-GTCTGTCTCTAAGCTTATTTTTTGATTTCGTATC  49
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACCTAGGTCTGTCTCTAAGCTTATTTTTTGATTTCGTATC  50

seq1  ATTTTCTCATGTACATCTGGGGCATTGTAGAAAATTTAGGTCGTTTTGCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCATGTACATCTGGGGCATTGTAGAAAATTTAGGTCGTTTTGCT  100

seq1  TCAGTAACATGCTAGTCATGGCAACATTAAATATATCTTTGCTGGTTACC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAACATGCTAGTCATGGCAACATTAAATATATCTTTGCTGGTTACC  150

seq1  TTTTAAGAACTTCCTGTTTTAATATATACAAAAGTGTGTCAACAAGTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAACTTCCTGTTTTAATATATACAAAAGTGTGTCAACAAGTTAA  200

seq1  TTTGGACGCAGCTCATTTTACTGAAATAATAAACTATAAGTGACTATAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACGCAGCTCATTTTACTGAAATAATAAACTATAAGTGACTATAGA  250

seq1  TAAAAGCTATGTAAACTGATTATTCAGTTGCAGTTTGATGTAGGGTTTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTATGTAAACTGATTATTCAGTTGCAGTTTGATGTAGGGTTTGC  300

seq1  TCTGATTATCGAAACAAATAGGCTAAAGATGTGGGAAAGAATGTTGCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTATCGAAACAAATAGGCTAAAGATGTGGGAAAGAATGTTGCTTC  350

seq1  CAAAACACTTGTCTTCCTGTTGCAGTGTTGTTTTGACATCTTGACTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACTTGTCTTCCTGTTGCAGTGTTGTTTTGACATCTTGACTCTTT  400

seq1  CAGTGAGTTATTCAATTCTTCATTCACTTGATAAATATTTACTGAAATCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTTATTCAATTCTTCATTCACTTGATAAATATTTACTGAAATCC  450

seq1  ACTAGGCACATTTCTACCTGGGACAAAGCACTGAAAGACAAACAAATCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCACATTTCTACCTGGGACAAAGCACTGAAAGACAAACAAATCAT  500

seq1  CCCTGTGTTTTGATAGTCATAGTCTGTGAAGAGAGAAGCAAATTAAGCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTTTTGATAGTCATAGTCTGTGAAGAGAGAAGCAAATTAAGCAA  550

seq1  ATAAAGAAATAAGACAGCCCAAAGAGTTCTTTATGAAATCAAGCATTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAATAAGACAGCCCAAAGAGTTCTTTATGAAATCAAGCATTATA  600

seq1  ACTACATAGTGGATTATGAGGACATGTGGCTTTAGAACCCACCAAGACTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATAGTGGATTATGAGGACATGTGGCTTTAGAACCCACCAAGACTC  650

seq1  TTCTGAGGCTATGACC-TTGGAGGGATGCTCACAGTAATCTATAAGATGG  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCTGAGGCTATGACCTTTGGAGGGATGCTCACAGTAATCTATAAGATGG  700

seq1  AACACAGGTCCCCCAATGGAGATGCTAGAGAAAGCACCCAAGGAGCTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGTCCCCCAATGGAGATGCTAGAGAAAGCACCCAAGGAGCTGAA  750

seq1  GGGGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCC  800

seq1  CCAGAGCTCATGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTCATGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGG  850

seq1  CCATCACTGGGAAGAGAGGCCCC-TTAGTATTGCAAAGTTTATATG-CCC  896
      || |||||| ||||||||||||| |||||||||||||||||||||| |||
seq2  CCTTCACTGTGAAGAGAGGCCCCTTTAGTATTGCAAAGTTTATATGCCCC  900

seq1  CAGTACAGGGGAAT-GCCAGGGCCAAGAAGCAGGAGT--GGGTGGGTAGG  943
      |||||||||||||| |||||||||||||||||||| |  || ||||||||
seq2  CAGTACAGGGGAATGGCCAGGGCCAAGAAGCAGGAATTGGGTTGGGTAGG  950

seq1  G-GAGCAGGGCAGGGAGGGGGG  964
      | |||||||| |||||||||||
seq2  GTGAGCAGGGTAGGGAGGGGGG  972


seq1: chr2_141789599_141790784
seq2: B6Ng01-212O02.g_68_1255 (reverse)

seq1  AGAGGAAAGAGAG--ATTGTTG-AACCACAGCCTCATTTTGACCTGGGAG  47
      |||||||| ||||    ||||| |||||||||||||||    | ||| ||
seq2  AGAGGAAACAGAGGACCTGTTGAAACCACAGCCTCATTGAAGCTTGGAAG  50

seq1  AGTACCCTCACCTTGAGTTAGA-TAAGAGAAAGATCAATTTGTAAG--AT  94
      |||| ||||||||||||||||| |||||  |||||||  |||||||  ||
seq2  AGTA-CCTCACCTTGAGTTAGATTAAGAAGAAGATCA--TTGTAAGATAT  97

seq1  AAGCAAAGATGTTAAACTTCATCCTGGCTGCTC-TTTCTGTCCATAGGTG  143
      |||||| |||||||| || |||||| ||||||| ||||  |||||| |||
seq2  AAGCAAGGATGTTAACCTCCATCCT-GCTGCTCTTTTCGTTCCATA-GTG  145

seq1  AGGCTCTAGAGTCCCAGGATGGTTAACAGTGAACAAG-AATAGTTTTGGG  192
      ||||||||||||||||| ||||||||||||||||||| ||||||||||| 
seq2  AGGCTCTAGAGTCCCAGAATGGTTAACAGTGAACAAGAAATAGTTTTGGC  195

seq1  CATAATCCACAAAGCAACTGTAGCATTGGAATGCTGTATGGTTATCACCA  242
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATAATCCACAAAGCAACTGTAGCATTGGAATGCTGTAT-GTTATCACCA  244

seq1  AGAGGGTGACATTACTACTTGTGACCCACAGGCAAGAGAATCCTTGAATT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGACATTACTACTTGTGACCCACAGGCAAGAGAATCCTTGAATT  294

seq1  ATTAAAGAGACCTGTGCCTCTTGGGGTGAATGCAAAATTTTCCTATTGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAGACCTGTGCCTCTTGGGGTGAATGCAAAATTTTCCTATTGCT  344

seq1  TCTGTGTTTCAGGGTCTTCACAAAGGATCATAGTAATGTATTCTGCCATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTCAGGGTCTTCACAAAGGATCATAGTAATGTATTCTGCCATG  394

seq1  TCATTTTTCTCCAATTATCTGAGCATTTTCAGGGATTCTGGAAGTAATGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCTCCAATTATCTGAGCATTTTCAGGGATTCTGGAAGTAATGA  444

seq1  GATATATGTGGAAGATGCTTCAAAGAAATGATTTAGGGAGGTTTTTACTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGTGGAAGATGCTTCAAAGAAATGATTTAGGGAGGTTTTTACTG  494

seq1  CAAAACTGATCATTTTCCATGAAGGGCACAAAGCTCACTGCCTCATCTTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGATCATTTTCCATGAAGGGCACAAAGCTCACTGCCTCATCTTC  544

seq1  CATGTGAACAGTACACTCTATGAATTTTATTTATTTTTTTTAAACAGAGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAACAGTACACTCTATGAATTTTATTTATTTTTTTTAAACAGAGA  594

seq1  AAGAGAAAAGGAATTTGTAGAGGAAAGATGAATATTATAGAAACTCAGTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAAGGAATTTGTAGAGGAAAGATGAATATTATAGAAACTCAGTA  644

seq1  TAGAAATCTTTTAACATAAGAAAAATAAGTAGCAAGAAATCATTTCCCTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTTTTAACATAAGAAAAATAAGTAGCAAGAAATCATTTCCCTA  694

seq1  AGGAAAATATCTTGAAAGTTAAGTAGATTCTCTTGGGTATAGAAAGTGAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATATCTTGAAAGTTAAGTAGATTCTCTTGGGTATAGAAAGTGAG  744

seq1  CCAGAACTAATAAAACAAACCATGTAAATGTATATGTGATGCTGGGACCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTAATAAAACAAACCATGTAAATGTATATGTGATGCTGGGACCA  794

seq1  AACGAAAAGCATGGCTCATCTTTTATTTTGAAGAAACATGTATTTAATGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAAAGCATGGCTCATCTTTTATTTTGAAGAAACATGTATTTAATGC  844

seq1  ATTGTACTTCTTCCTTCAGCTTTGTTACACTCCATTGGATTAAGAGGTAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTCTTCCTTCAGCTTTGTTACACTCCATTGGATTAAGAGGTAA  894

seq1  CAGCAGGCAAGCTAATTTTGAAATCACATACACATGCTGCATAATGGCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCAAGCTAATTTTGAAATCACATACACATGCTGCATAATGGCAG  944

seq1  GCATAGCTTTTGGAAGTATTATTTGTCATTCAAAAACCTATTTTATATAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCTTTTGGAAGTATTATTTGTCATTCAAAAACCTATTTTATATAT  994

seq1  ATATACATATATTGCCTAATACTCTTTCTAGTAATATTTTACATGATACT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATATTGCCTAATACTCTTTCTAGTAATATTTTACATGATACT  1044

seq1  CACTGGGGCTGCACTATCTAAATAATGCCCACTCTAGTTCATGCAGTCAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCTGCACTATCTAAATAATGCCCACTCTAGTTCATGCAGTCAT  1094

seq1  GTATGCATTACACCAGGTGGTCTCACTCTCTTAAAAACCCCTTTTTTATC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCATTACACCAGGTGGTCTCACTCTCTTAAAAACCCCTTTTTTATC  1144

seq1  CACTCATTGTCTCAGCAACATGAAGTTAGGTCAATGGAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTGTCTCAGCAACATGAAGTTAGGTCAATGGAGAATTC  1188


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