BAC Information

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BAC

Clone NameB6Ng01-213A21
Chromosome2 (Build37)
Map Location 55,995,544 - 55,996,679
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666936, Kcnj3
Downstream geneLOC227920, Nr4a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213A21.bB6Ng01-213A21.g
ACCGA030691GA030692
length1,131981
definitionB6Ng01-213A21.b B6Ng01-213A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttctagtcattttgacaaataaaaagaaattgttgtgtttaa
accaagaaaattgaaaatttgagaagcaaaaattttctatggaacatata
gatctaaatattaatcctataactattcttctagctattttgaaacctcc
tagtggacacagtgaataattgaatttgaacctgttgttaaaaccatata
aatgtaagataatggctatcataaataccttttgtacataatatgtctat
tgcttgaattggcttggagaactcaccatgacagaaaatcatgagataaa
taatagcaaaatatcaaaagagattttcttttatttttttcttttcttgt
cttttttgttttttgttttggtttactttggagttttgttttgttttctt
tacttttttttttttttgtaccccctaggtggtcatgttgagaggaagct
gagtattgaacacaaacttcatagtttctgtaagaagccatgtgcttttc
atataagtagctgccaatgctctgggtaaagagtagaacagttgggaata
actttacttgtggcagagggtgctggcttttgattatagaccaaagagaa
ctgaagagaggaagccaatgtctatttgcagatgtatagtgaatgccagc
ctgggttttcctatttggttatcataaaaataatgaaggagagaagaata
ttcctggattaatggatactactgtgcttcagccaggagaatcagaaagc
atttcagtttcttgaacacttatttatttaatcatgtgctttcaggaagc
ccttaaataaacttgaaacatattgtgaaagatgtaggctgtcatcactg
agaatgtatacttcgaagtccaagaccaattaataataaatttttaagag
tagcaataaaatgactaagacttggggggggggaaagaacatcaaaacaa
gttctgtaaaataatagatatccaaaatgtaacactttacaagaaagtag
aaaatcaagccactggcctttgtcgttgttctatgcaagcattgacctag
tagcagctatggaccatgcactgaaaacaagcaagactcttaccatttta
tctgctaatgcagcataacctagagaagtgt
gaattctttgtttagctctgagccccgttttttcaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattggtcc
catatctttatatatattggatattggtcccatatctgatttaggatagg
taaagatcctttcccaatctgttggtcacctttttgtcttattgatggtg
tcttttgccttacagaagctttgtagtttcatgaggttccatttgtcaat
tctcaatcttacagaacaagccattgctgttctattcaggaatttttccc
ctgtgccaatatcttcgaggcttttccccactttctcctctataagtttc
agtgtctctggttttatgtggagttccttgattcacttagatttgacctt
agtacaaggagataggaatggatcaatttgcattcttctacatgataacc
accagttgtgccagcaccatttgttgaaaatgctgtcttttttccactgg
atggttttagctcccttgacaaagatcaagtgaccataggtgtgtgggtt
catttctgggtcttcaattctattccattggtctacttgtttgtcgctat
agcagtaccatgcagttttttatcacaattgctctgtagtacagctttag
gtcaggcatggtgatttgttatgttgtttttaccatcataagtctgaact
aattagatgtagcaattattaaacttcagaaacatggaaaacattttaca
atcaacaatattagtctgttttccttatctcctaataatacagagattca
aaggaaacatgcactaaaacaaacctaacaattactcagagttcaggaaa
taattacttgttttcaaagtatgaaaataaaactaagtataaaaggtgat
taagacatggtctaccatctggcggtggtggcacatgccttaatcccagc
acttgggaggcagaggcaggcagaatttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55995544_55996679
seq2: B6Ng01-213A21.b_43_1173

seq1  GAATTCATTTCTAGTCATTTTGACAAATAAAAAGAAATTGTTGTGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTAGTCATTTTGACAAATAAAAAGAAATTGTTGTGTTTAA  50

seq1  ACCAAGAAAATTGAAAATTTGAGAAGCAAAAATTTTCTATGGAACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAAATTGAAAATTTGAGAAGCAAAAATTTTCTATGGAACATATA  100

seq1  GATCTAAATATTAATCCTATAACTATTCTTCTAGCTATTTTGAAACCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAAATATTAATCCTATAACTATTCTTCTAGCTATTTTGAAACCTCC  150

seq1  TAGTGGACACAGTGAATAATTGAATTTGAACCTGTTGTTAAAACCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGACACAGTGAATAATTGAATTTGAACCTGTTGTTAAAACCATATA  200

seq1  AATGTAAGATAATGGCTATCATAAATACCTTTTGTACATAATATGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGATAATGGCTATCATAAATACCTTTTGTACATAATATGTCTAT  250

seq1  TGCTTGAATTGGCTTGGAGAACTCACCATGACAGAAAATCATGAGATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAATTGGCTTGGAGAACTCACCATGACAGAAAATCATGAGATAAA  300

seq1  TAATAGCAAAATATCAAAAGAGATTTTCTTTTATTTTTTTCTTTTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAAAATATCAAAAGAGATTTTCTTTTATTTTTTTCTTTTCTTGT  350

seq1  CTTTTTTGTTTTTTGTTTTGGTTTACTTTGGAGTTTTGTTTTGTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTTTTTTGTTTTGGTTTACTTTGGAGTTTTGTTTTGTTTTCTT  400

seq1  TACTTTTTTTTTTTTTTGTACCCCCTAGGTGGTCATGTTGAGAGGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTTTTTTTTTGTACCCCCTAGGTGGTCATGTTGAGAGGAAGCT  450

seq1  GAGTATTGAACACAAACTTCATAGTTTCTGTAAGAAGCCATGTGCTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTGAACACAAACTTCATAGTTTCTGTAAGAAGCCATGTGCTTTTC  500

seq1  ATATAAGTAGCTGCCAATGCTCTGGGTAAAGAGTAGAACAGTTGGGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTAGCTGCCAATGCTCTGGGTAAAGAGTAGAACAGTTGGGAATA  550

seq1  ACTTTACTTGTGGCAGAGGGTGCTGGCTTTTGATTATAGACCAAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTTGTGGCAGAGGGTGCTGGCTTTTGATTATAGACCAAAGAGAA  600

seq1  CTGAAGAGAGGAAGCCAATGTCTATTTGCAGATGTATAGTGAATGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAGGAAGCCAATGTCTATTTGCAGATGTATAGTGAATGCCAGC  650

seq1  CTGGGTTTTCCTATTTGGTTATCATAAAAATAATGAAGGAGAGAAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTTCCTATTTGGTTATCATAAAAATAATGAAGGAGAGAAGAATA  700

seq1  TTCCTGGATTAATGGATACTACTGTGCTTCAGCCAGGAGAATCAGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGATTAATGGATACTACTGTGCTTCAGCCAGGAGAATCAGAAAGC  750

seq1  ATTTCAGTTTCTTGAACACTTATTTATTTAATCATGTGCTTTCAGGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTTTCTTGAACACTTATTTATTTAATCATGTGCTTTCAGGAAGC  800

seq1  CCTTAAATAAACTTGAAACATATTGTGAAAGATGTAGGCTGTCATCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATAAACTTGAAACATATTGTGAAAGATGTAGGCTGTCATCACTG  850

seq1  AGAATGTATACTTCGAAGTCCAAGACCAATTAATAATAAATTTTTAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTATACTTCGAAGTCCAAGACCAATTAATAATAAATTTTTAAGAG  900

seq1  TAGCAATAAAATGACTAAGACTTGGGGGGGGGGAAAGAACATCAAAACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATAAAATGACTAAGACTTGGGGGGGGGGAAAGAACATCAAAACAA  950

seq1  GTTCTGTAAAATTATTAGATATCCATAAATTTAACA-TTTACAAGAAAGT  999
      ||||||||||| || |||||||||| |||| ||||| |||||||||||||
seq2  GTTCTGTAAAA-TAATAGATATCCA-AAATGTAACACTTTACAAGAAAGT  998

seq1  AGAAAATCAAGCAAATGGCCTTTGTCTTTGTATATCTGCAAAGCATTGAT  1049
      |||||||||||| | ||||||||||| |||| | | ||| ||||||||| 
seq2  AGAAAATCAAGCCACTGGCCTTTGTCGTTGT-TCTATGC-AAGCATTGA-  1045

seq1  CTTAGTAACAGCTAGTGACTATGACATGAGAAGAAACAAAAATTTTAGCA  1099
      | ||||| ||||||  ||| |||   ||| || || ||| | | ||| ||
seq2  CCTAGTAGCAGCTATGGACCATGCACTGAAAACAAGCAAGACTCTTACCA  1095

seq1  TTTTATCTGCTTAGAGGGAGCAGCAGC-AGAGAAGTGT  1136
      |||||||||||   | | ||||  | | ||||||||||
seq2  TTTTATCTGCT--AATGCAGCATAACCTAGAGAAGTGT  1131