BAC Information

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BAC

Clone NameB6Ng01-213G08
Chromosome2 (Build37)
Map Location 55,995,544 - 55,996,732
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666936, Kcnj3
Downstream geneLOC227920, Nr4a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213G08.bB6Ng01-213G08.g
ACCGA030938GA030939
length1,163990
definitionB6Ng01-213G08.b B6Ng01-213G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttctagtcattttgacaaataaaaagaaattgttgtgtttaa
accaagaaaattgaaaatttgagaagcaaaaattttctatggaacatata
gatctaaatattaatcctataactattcttctagctattttgaaacctcc
tagtggacacagtgaataattgaatttgaacctgttgttaaaaccatata
aatgtaagataatggctatcataaataccttttgtacataatatgtctat
tgcttgaattggcttggagaactcaccatgacagaaaatcatgagataaa
taatagcaaaatatcaaaagagattttcttttatttttttcttttcttgt
cttttttgttttttgttttggtttactttggagttttgttttgttttctt
tacttttttttttttttgtaccccctaggtggtcatgttgagaggaagct
gagtattgaacacaaacttcatagtttctgtaagaagccatgtgcttttc
atataagtagctgccaatgctctgggtaaagagtagaacagttgggaata
actttacttgtggcagagggtgctggcttttgattatagaccaaagagaa
ctgaagagaggaagccaatgtctatttgcagatgtatagtgaatgccagc
ctgggttttcctatttggttatcataaaaataatgaaggagagaagaata
ttcctggattaatggatactactgtgcttcagccaggagaatcagaaagc
atttcagtttcttgaacacttatttatttaatcatgtgctttcaggaagc
ccttaaataaacttgaaacatattgtgaaagatgtaggctgtcatcactg
agaatgtatacttcgaagtccaagaccaattaataataaatttttaagag
tagcaataaaatgactaagacttgggggggggggaaagaacatcaaacag
ttctgttaattatagatatccataaatttaacattacagaaagtagaaaa
tcagcaatggccttgtctttgtatatctgcaaagcattgatctagtacag
ctagtgacttatgactgagaagaacaaatctagcaatttatctgcttaag
gggcacaacagaatggttgagaaaaatgtattagaacggtagctagccat
gctcagcttgaaa

gaattctttgtttagctctgagccccgttttttcaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattggtcc
catatctttatatatattggatattggtcccatatctgatttaggatagg
taaagatcctttcccaatctgttggtcacctttttgtcttattgatggtg
tcttttgccttacagaagctttgtagtttcatgaggttccatttgtcaat
tctcaatcttacagaacaagccattgctgttctattcaggaatttttccc
ctgtgccaatatcttcgaggcttttccccactttctcctctataagtttc
agtgtctctggttttatgtggagttccttgattcacttagatttgacctt
agtacaaggagataggaatggatcaatttgcattcttctacatgataacc
accagttgtgccagcaccatttgttgaaaatgctgtcttttttccactgg
atggttttagctcccttgacaaagatcaagtgaccataggtgtgtgggtt
catttctgggtcttcaattctattccattggtctacttgtttgtcgctat
agcagtaccatgcagttttttatcacaattgctctgtagtacagctttag
gtcaggcatggtgatttgttatgttgtttttaccatcataagtctgaact
aattagatgtagcaattattaaacttcagaaacatggaaaacattttaca
atcaacaatattagtctgttttccttatctcctaataatacagagattca
aaggaaacatgcactaaaacaaacctaacaatttactcagagttcaagaa
ataattacttgttttcaaagtatgaaaataaaactaagtataaaaaggtg
attaagacatggtctaccatctggcggtggtggcacatgcctttaatccc
agcacttgggaagcagaggcaggcagattttctgagttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55995544_55996732
seq2: B6Ng01-213G08.b_44_1206

seq1  GAATTCATTTCTAGTCATTTTGACAAATAAAAAGAAATTGTTGTGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTAGTCATTTTGACAAATAAAAAGAAATTGTTGTGTTTAA  50

seq1  ACCAAGAAAATTGAAAATTTGAGAAGCAAAAATTTTCTATGGAACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAAATTGAAAATTTGAGAAGCAAAAATTTTCTATGGAACATATA  100

seq1  GATCTAAATATTAATCCTATAACTATTCTTCTAGCTATTTTGAAACCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAAATATTAATCCTATAACTATTCTTCTAGCTATTTTGAAACCTCC  150

seq1  TAGTGGACACAGTGAATAATTGAATTTGAACCTGTTGTTAAAACCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGACACAGTGAATAATTGAATTTGAACCTGTTGTTAAAACCATATA  200

seq1  AATGTAAGATAATGGCTATCATAAATACCTTTTGTACATAATATGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGATAATGGCTATCATAAATACCTTTTGTACATAATATGTCTAT  250

seq1  TGCTTGAATTGGCTTGGAGAACTCACCATGACAGAAAATCATGAGATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAATTGGCTTGGAGAACTCACCATGACAGAAAATCATGAGATAAA  300

seq1  TAATAGCAAAATATCAAAAGAGATTTTCTTTTATTTTTTTCTTTTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAAAATATCAAAAGAGATTTTCTTTTATTTTTTTCTTTTCTTGT  350

seq1  CTTTTTTGTTTTTTGTTTTGGTTTACTTTGGAGTTTTGTTTTGTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTTTTTTGTTTTGGTTTACTTTGGAGTTTTGTTTTGTTTTCTT  400

seq1  TACTTTTTTTTTTTTTTGTACCCCCTAGGTGGTCATGTTGAGAGGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTTTTTTTTTGTACCCCCTAGGTGGTCATGTTGAGAGGAAGCT  450

seq1  GAGTATTGAACACAAACTTCATAGTTTCTGTAAGAAGCCATGTGCTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTGAACACAAACTTCATAGTTTCTGTAAGAAGCCATGTGCTTTTC  500

seq1  ATATAAGTAGCTGCCAATGCTCTGGGTAAAGAGTAGAACAGTTGGGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTAGCTGCCAATGCTCTGGGTAAAGAGTAGAACAGTTGGGAATA  550

seq1  ACTTTACTTGTGGCAGAGGGTGCTGGCTTTTGATTATAGACCAAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTTGTGGCAGAGGGTGCTGGCTTTTGATTATAGACCAAAGAGAA  600

seq1  CTGAAGAGAGGAAGCCAATGTCTATTTGCAGATGTATAGTGAATGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAGGAAGCCAATGTCTATTTGCAGATGTATAGTGAATGCCAGC  650

seq1  CTGGGTTTTCCTATTTGGTTATCATAAAAATAATGAAGGAGAGAAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTTCCTATTTGGTTATCATAAAAATAATGAAGGAGAGAAGAATA  700

seq1  TTCCTGGATTAATGGATACTACTGTGCTTCAGCCAGGAGAATCAGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGATTAATGGATACTACTGTGCTTCAGCCAGGAGAATCAGAAAGC  750

seq1  ATTTCAGTTTCTTGAACACTTATTTATTTAATCATGTGCTTTCAGGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTTTCTTGAACACTTATTTATTTAATCATGTGCTTTCAGGAAGC  800

seq1  CCTTAAATAAACTTGAAACATATTGTGAAAGATGTAGGCTGTCATCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATAAACTTGAAACATATTGTGAAAGATGTAGGCTGTCATCACTG  850

seq1  AGAATGTATACTTCGAAGTCCAAGACCAATTAATAATAAATTTTTAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTATACTTCGAAGTCCAAGACCAATTAATAATAAATTTTTAAGAG  900

seq1  TAGCAATAAAATGACTAAGACTT-GGGGGGGGGGAAAGAACATCAAAACA  949
      ||||||||||||||||||||||| |||||||||||||||||||||||   
seq2  TAGCAATAAAATGACTAAGACTTGGGGGGGGGGGAAAGAACATCAAA--C  948

seq1  AGTTCTGTAAAATTATTAGATATCCATAAATTTAACATTTACAAGAAAGT  999
      ||||||||  ||||| ||||||||||||||||||||| |||| |||||||
seq2  AGTTCTGT-TAATTA-TAGATATCCATAAATTTAACA-TTAC-AGAAAGT  994

seq1  AGAAAATCAAGCAAATGGCCTTTGTCTTTGTATATCTGCAAAGCATTGAT  1049
      |||||||| ||| ||||||| |||||||||||||||||||||||||||||
seq2  AGAAAATC-AGC-AATGGCC-TTGTCTTTGTATATCTGCAAAGCATTGAT  1041

seq1  CTTAGTAACAGCTAGTGAC-TATGACATGAGAAGAAACAAAAATTTTAGC  1098
      | |||| |||||||||||| |||||| ||||||| ||||||   | ||||
seq2  C-TAGT-ACAGCTAGTGACTTATGAC-TGAGAAG-AACAAA---TCTAGC  1084

seq1  ATTTTATCTGCTTAGAGGGAGCAGCAGCAGAGAAGTGTTGAAGAGAAAAA  1148
      | |||||||||||| ||||    |||  | ||||  |||   ||||||||
seq2  AATTTATCTGCTTA-AGGG----GCACAACAGAATGGTT---GAGAAAAA  1126

seq1  TGTAATAGACAGGTAGGTTAGCCAATGGCTCAGCTTTGAAA  1189
      |||| ||||  |||| | ||||||   ||||||| ||||||
seq2  TGTATTAGAACGGTA-GCTAGCCA--TGCTCAGC-TTGAAA  1163


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