BAC Information

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BAC

Clone NameB6Ng01-213P05
Chromosome2 (Build37)
Map Location 157,310,674 - 157,491,735
singlet/doubletdoublet
Overlap geneBlcap, Nnat
Upstream geneEpb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src
Downstream geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213P05.bB6Ng01-213P05.g
ACCGA031332GA031333
length623900
definitionB6Ng01-213P05.b B6Ng01-213P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,491,113 - 157,491,735)(157,310,674 - 157,311,569)
sequence
gaattctttgatggataaagcctgaggaggccacacagtctggagcctgc
cttcactggagacgaacaacctcagcctctttaaaatcaggcactctgcc
agggattgagatggcaccacacccagacatttttgtcccgcagaggcact
ccatctcctgtgccccaaactgccactcttttctctgggaggagacctct
gttgaccaggatcatttctcaaagatgagtccctctctcccatcatgcaa
cagtccacagatgaacaggcaatgatggggtgtcccaggtgagccccttg
tggcaaggcagggtcagttctgtggtgcagccagggaaagactcccctgg
aacctattctatctcctccttgccccccccccccgtgtcttcctctcctg
ttgtgcagaacttcttcatgctcctcactgagtcttagatgcagcatccc
tccctcccaggatcttctgggcccaaatcagagacagtccttctcaaacc
tcctgtgtgctctaggtgtgtaatcttaccccagcaaggagctaattcat
ttcctacagtgttccagaagccatgatggatgctttgtatctgtcatctt
ccttaaagaggggggggggggag
gaattcaactttagatactagcagtgagagaaagatgataacgatttcta
aaatgaaagaccttgctggtcagggccaggcctggggacagccctgagtc
tgccctgcaggttccaggagcagttacactgatgggcatagttgactcag
gggctgggagtggagtcaggaggtgtattagttagggttttactgctgtg
aacagacaccatgaccaaggcaagtcttataaaaaaacaacatttaattg
gggctggcttacaggttcagaggttcagtccattatcatcaaggtgggag
catgacagcatccaggcaggcatggtgcaggaggagctgagagttctatg
tcttcatccaaaggctgcttgtggaagactgtcttccaggcaactagggt
cttatacccacactcacagtgacacacccattccaaccaggtcacaccta
ttccaacaaggccacaccttcagatggtgccactccctggtccaaggata
tacaaaccatcacaggaggtgtgagaaagagaccaagagacagacaggag
gtagatgtaaatgaaggagaaacacagggagacagaaagacaaatgggac
ctcaagtatgggctgagtgacagaggaagacaggagcttgaagaaagatc
ctaaagatgggagtatgcccaggagtgacagggagtgtgcccaggggtga
cagggtgagttgccacctgaggggtggttttggtcttgagaagagcccag
gccaatgctaggaaacatcttaggagtccctagggtgtagtttgacatct
ggggcgaaagctgttgctttaaacccgtgggccactggtacctagtagaa
gctgggcttggagagagttcgatcctgtgacatggggggctggtgggggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157491113_157491735
seq2: B6Ng01-213P05.b_46_668 (reverse)

seq1  CTCCCCCCCCCCCCTCTTTAAGGAAGATGACAGATACAAAGCATCCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCCCTCTTTAAGGAAGATGACAGATACAAAGCATCCATCA  50

seq1  TGGCTTCTGGAACACTGTAGGAAATGAATTAGCTCCTTGCTGGGGTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTGGAACACTGTAGGAAATGAATTAGCTCCTTGCTGGGGTAAGA  100

seq1  TTACACACCTAGAGCACACAGGAGGTTTGAGAAGGACTGTCTCTGATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACCTAGAGCACACAGGAGGTTTGAGAAGGACTGTCTCTGATTTG  150

seq1  GGCCCAGAAGATCCTGGGAGGGAGGGATGCTGCATCTAAGACTCAGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGAAGATCCTGGGAGGGAGGGATGCTGCATCTAAGACTCAGTGAG  200

seq1  GAGCATGAAGAAGTTCTGCACAACAGGAGAGGAAGACACGGGGGGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGAAGAAGTTCTGCACAACAGGAGAGGAAGACACGGGGGGGGGGG  250

seq1  GCAAGGAGGAGATAGAATAGGTTCCAGGGGAGTCTTTCCCTGGCTGCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAGGAGATAGAATAGGTTCCAGGGGAGTCTTTCCCTGGCTGCACC  300

seq1  ACAGAACTGACCCTGCCTTGCCACAAGGGGCTCACCTGGGACACCCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTGACCCTGCCTTGCCACAAGGGGCTCACCTGGGACACCCCATC  350

seq1  ATTGCCTGTTCATCTGTGGACTGTTGCATGATGGGAGAGAGGGACTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTGTTCATCTGTGGACTGTTGCATGATGGGAGAGAGGGACTCATC  400

seq1  TTTGAGAAATGATCCTGGTCAACAGAGGTCTCCTCCCAGAGAAAAGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAATGATCCTGGTCAACAGAGGTCTCCTCCCAGAGAAAAGAGTG  450

seq1  GCAGTTTGGGGCACAGGAGATGGAGTGCCTCTGCGGGACAAAAATGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGGGCACAGGAGATGGAGTGCCTCTGCGGGACAAAAATGTCTG  500

seq1  GGTGTGGTGCCATCTCAATCCCTGGCAGAGTGCCTGATTTTAAAGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTGCCATCTCAATCCCTGGCAGAGTGCCTGATTTTAAAGAGGCT  550

seq1  GAGGTTGTTCGTCTCCAGTGAAGGCAGGCTCCAGACTGTGTGGCCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTTCGTCTCCAGTGAAGGCAGGCTCCAGACTGTGTGGCCTCCTC  600

seq1  AGGCTTTATCCATCAAAGAATTC  623
      |||||||||||||||||||||||
seq2  AGGCTTTATCCATCAAAGAATTC  623

seq1: chr2_157310674_157311569
seq2: B6Ng01-213P05.g_68_967

seq1  GAATTCAACTTTAGATACTAGCAGTGAGAGAAAGATGATAACGATTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTAGATACTAGCAGTGAGAGAAAGATGATAACGATTTCTA  50

seq1  AAATGAAAGACCTTGCTGGTCAGGGCCAGGCCTGGGGACAGCCCTGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGACCTTGCTGGTCAGGGCCAGGCCTGGGGACAGCCCTGAGTC  100

seq1  TGCCCTGCAGGTTCCAGGAGCAGTTACACTGATGGGCATAGTTGACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCAGGTTCCAGGAGCAGTTACACTGATGGGCATAGTTGACTCAG  150

seq1  GGGCTGGGAGTGGAGTCAGGAGGTGTATTAGTTAGGGTTTTACTGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGAGTGGAGTCAGGAGGTGTATTAGTTAGGGTTTTACTGCTGTG  200

seq1  AACAGACACCATGACCAAGGCAAGTCTTATAAAAAAACAACATTTAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACACCATGACCAAGGCAAGTCTTATAAAAAAACAACATTTAATTG  250

seq1  GGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAG  300

seq1  CATGACAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTATG  350

seq1  TCTTCATCCAAAGGCTGCTTGTGGAAGACTGTCTTCCAGGCAACTAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCCAAAGGCTGCTTGTGGAAGACTGTCTTCCAGGCAACTAGGGT  400

seq1  CTTATACCCACACTCACAGTGACACACCCATTCCAACCAGGTCACACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACCCACACTCACAGTGACACACCCATTCCAACCAGGTCACACCTA  450

seq1  TTCCAACAAGGCCACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACAAGGCCACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATA  500

seq1  TACAAACCATCACAGGAGGTGTGAGAAAGAGACCAAGAGACAGACAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCATCACAGGAGGTGTGAGAAAGAGACCAAGAGACAGACAGGAG  550

seq1  GTAGATGTAAATGAAGGAGAAACACAGGGAGACAGAAAGACAAATGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTAAATGAAGGAGAAACACAGGGAGACAGAAAGACAAATGGGAC  600

seq1  CTCAAGTATGGGCTGAGTGACAGAGGAAGACAGGAGCTTGAAGAAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTATGGGCTGAGTGACAGAGGAAGACAGGAGCTTGAAGAAAGATC  650

seq1  CT-AAGATGGGAGTATGCCCAGGAGTGACAGGGAGTGTGCCCAGGGGTGA  699
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGATGGGAGTATGCCCAGGAGTGACAGGGAGTGTGCCCAGGGGTGA  700

seq1  CAGGGTGAGTTGCCACCTGAGGGGTGGTTTTGGTCTTGAGAAGAGCCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGAGTTGCCACCTGAGGGGTGGTTTTGGTCTTGAGAAGAGCCCAG  750

seq1  GCCAATGCTAGGAAACATCTTAGGAGTCCCTAGGGTGTAGTTTGACATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGCTAGGAAACATCTTAGGAGTCCCTAGGGTGTAGTTTGACATCT  800

seq1  GGGGCGAAGGCTG-TGCTTTAAACCCGTGGGCCACTGGTAGCTAGCAGAA  848
      |||||||| |||| |||||||||||||||||||||||||| |||| ||||
seq2  GGGGCGAAAGCTGTTGCTTTAAACCCGTGGGCCACTGGTACCTAGTAGAA  850

seq1  GCTGGGCTT-GAGAGAGTTCGATCCTGTGACAGTGGGGGCT-GTGGGGGG  896
      ||||||||| ||||||||||||||||||||||  ||||||| ||||||||
seq2  GCTGGGCTTGGAGAGAGTTCGATCCTGTGACATGGGGGGCTGGTGGGGGG  900