BAC Information

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BAC

Clone NameB6Ng01-214A03
Chromosome2 (Build37)
Map Location 81,470,294 - 81,471,524
singlet/doubletsinglet
Overlap genenone
Upstream geneDusp19, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655, LOC100040704
Downstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214A03.bB6Ng01-214A03.g
ACCGA031375GA031376
length1,2091,210
definitionB6Ng01-214A03.b B6Ng01-214A03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tatttgttatttccaaaagaacatcaaatatgaagagtaaatatcagcct
gttttcagcattctagacaataaagctctgtgaaaaagagtgagtatgac
tattataatgaaacaaacaataattatattctcaactttagtgggtaaat
atcattgcctatgagagacattatatagaattattttcaataaaaacagt
tttcctcttactaatttgtatgtgtgtgtgtattgctttgtgcatgtgag
tctcctgtgaagatgtccaagaaggccagaagagagtggcggatctcctg
gcgctaaagttactggcaattgagggctgcccatggttagcactgggaat
gaaatattatgctatgcaagagcatcaggccaactcctaaaactttctct
agtttagaatactatattttataaacaaagaaaaagtcaaataatctgtc
agtaacatagtaacagaaattgaaaacaaagtatggaaactattcatcaa
attatgcattttaatacatgcatgtaggttagctaagttacagttgagag
gacaaacctactccatctcagaactgctctccattaataaaaacaaacaa
acaaaaaaataaacttgacaatttgacctacagctgatcacaagctacac
tcaagtaccaggaaggaccccagggcttttccttgccccatacctcagag
ttactccctagctacttcctaacaacagttaatcaaagattagtctgatt
gcttcagaacactcacctgggggcttacaagattcattttgttagctata
gatactttccaggctagacaacccctgacttactcttatttcctataaaa
ccttgtcctgctgagggttctccagaaacccaccaccttttcttccaagc
ctgtaataaaaaaaaccaaaacccaaaaaccaaaaacaaacaacaacaca
aaaaaaaaggaaaccaagaacaatgcaactacattggaatggctccttgg
gttcagaatgcttcctggctcatgtaacacttatcatatctcagtgactt
cacattacaaacatcacttactttgcacattactgcatagatcgaactgc
agtctctatctgatgcctatccaagcaatgatgactctcctctcttaaga
cttctcatgctgaagtccagggcctatcctcaccgtgttggcaaattaca
ctgggggga

gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctccgggcagtcggtttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaatgcgcaga
gaggcagtgcgcagagaggcagtgcgcagagaggcagtgcgcagagaggc
agtgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcatt
cccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagg
agccgagggtgggcgtgtccacgctccggtagaatacgtacagattaaag
aactcgccgagtcggtccgtaaatacggaaccaatgctaattttaccttg
gtgcagttagacaggctcgccggcatggcactaactcctgctgactggca
aacgattgtaaaagccgctctccctagtatgggcaaatatatggaatgga
gagcgctttggcacgaagctgcacaagcgcaggcccgagcaaacgcagct
gctttgactccagagcagagagattggacttttgacttgttaacgggtca
gggagcttattctgctgatcagacaaactaccattggggagcttatgccc
aaatttcctccacggctattagggcctggaaggcgctctcccgagcaggg
gaagccactgggcaattaacaaagataatccagggacctcaggaatcctt
ctcagattttgtggccagaatgacagaggcagcagagcgtatttttggag
agtcagagcaagccgcgcctctggtagaacagctcatctatgagcaagcc
acaaggagtgccgagcggccatagccccaagaaagaacaaaggcttacag
actggctcaggtctgtcgagagcttgggggacctctcagcatgcagttta
gcggctgccatccttcatcccaaaaccgctccatgggcagaaatatcaga
ggacatgttttactgcgaagctggcatttaagaaagattgctagctcgat
taacggaggactcttcatcttgtctaggtgtgcagttatcataagctgac
agttgccttgtagataaaggttaaggtcttctacactgtaatgtcactat
cgacctatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81470294_81471524
seq2: B6Ng01-214A03.b_44_1252 (reverse)

seq1  TACCCCCACTGTAATAT-CCAACA--GTGAGGATAGCCTTTGTGACCTCC  47
      | |||||| |||||| | ||||||  |||||||||| |  || || || |
seq2  TCCCCCCAGTGTAATTTGCCAACACGGTGAGGATAGGCCCTG-GA-CTTC  48

seq1  AGCAATGAGGAAAGTCTTTTAGAGA-GAGAGTCATCATTGCCTTGTGATA  96
      ||| |||||  ||||| || ||||| |||||||||||||| |||| ||||
seq2  AGC-ATGAG--AAGTC-TTAAGAGAGGAGAGTCATCATTG-CTTG-GATA  92

seq1  GGCCATCAAGGATAGAGACCTTGCAGGTCGATCTATGCAGTAATGTGGCA  146
      || |||||  |||||||||  ||||| ||||||||||||||||||||   
seq2  GG-CATCA--GATAGAGAC--TGCAGTTCGATCTATGCAGTAATGTG--C  135

seq1  AAAGTAAGTGATGTTTGTTATGTGAAGTCACTGAGATATTGAATTAAGTG  196
      |||||||||||||||||| ||||||||||||||||||| |||  ||||||
seq2  AAAGTAAGTGATGTTTGTAATGTGAAGTCACTGAGATA-TGA--TAAGTG  182

seq1  TTACATGAGCCAGGAAGCATTCCTGAACCCCAAGGAGCCATTTCCAATGT  246
      ||||||||||||||||||||| ||||| |||||||||||| |||||||||
seq2  TTACATGAGCCAGGAAGCATT-CTGAA-CCCAAGGAGCCA-TTCCAATGT  229

seq1  AGTTGCATTGTTTCTTTGGTTTTCCTTTTTTTTTGTTGTTGTTGTTTGTT  296
      |||||||||| |||||  | ||||||||||||||| |||||||||||| |
seq2  AGTTGCATTG-TTCTT--GGTTTCCTTTTTTTTTG-TGTTGTTGTTTG-T  274

seq1  TTTTGGTTTTTGGTTTTTGGTTTTTTTTATTACAGGCTTGGAAGAAAAGG  346
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTTGGGTTTTGGTTTTTTTTATTACAGGCTTGGAAGAAAAGG  324

seq1  TGGTGGGTTTCTGGAGAACCCTCAGCAGGACAAGGTTTTATAGGAAATAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGTTTCTGGAGAACCCTCAGCAGGACAAGGTTTTATAGGAAATAA  374

seq1  GAGTAAGTCAGGGGTTGTCTAGCCTGGAAAGTATCTATAGCTAACAAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGTCAGGGGTTGTCTAGCCTGGAAAGTATCTATAGCTAACAAAAT  424

seq1  GAATCTTGTAAGCCCCCAGGTGAGTGTTCTGAAGCAATCAGACTAATCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGTAAGCCCCCAGGTGAGTGTTCTGAAGCAATCAGACTAATCTT  474

seq1  TGATTAACTGTTGTTAGGAAGTAGCTAGGGAGTAACTCTGAGGTATGGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAACTGTTGTTAGGAAGTAGCTAGGGAGTAACTCTGAGGTATGGGG  524

seq1  CAAGGAAAAGCCCTGGGGTCCTTCCTGGTACTTGAGTGTAGCTTGTGATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAAGCCCTGGGGTCCTTCCTGGTACTTGAGTGTAGCTTGTGATC  574

seq1  AGCTGTAGGTCAAATTGTCAAGTTTATTTTTTTGTTTGTTTGTTTTTATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAGGTCAAATTGTCAAGTTTATTTTTTTGTTTGTTTGTTTTTATT  624

seq1  AATGGAGAGCAGTTCTGAGATGGAGTAGGTTTGTCCTCTCAACTGTAACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAGCAGTTCTGAGATGGAGTAGGTTTGTCCTCTCAACTGTAACT  674

seq1  TAGCTAACCTACATGCATGTATTAAAATGCATAATTTGATGAATAGTTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAACCTACATGCATGTATTAAAATGCATAATTTGATGAATAGTTTC  724

seq1  CATACTTTGTTTTCAATTTCTGTTACTATGTTACTGACAGATTATTTGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTGTTTTCAATTTCTGTTACTATGTTACTGACAGATTATTTGAC  774

seq1  TTTTTCTTTGTTTATAAAATATAGTATTCTAAACTAGAGAAAGTTTTAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGTTTATAAAATATAGTATTCTAAACTAGAGAAAGTTTTAGG  824

seq1  AGTTGGCCTGATGCTCTTGCATAGCATAATATTTCATTCCCAGTGCTAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCCTGATGCTCTTGCATAGCATAATATTTCATTCCCAGTGCTAAC  874

seq1  CATGGGCAGCCCTCAATTGCCAGTAACTTTAGCGCCAGGAGATCCGCCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCAGCCCTCAATTGCCAGTAACTTTAGCGCCAGGAGATCCGCCAC  924

seq1  TCTCTTCTGGCCTTCTTGGACATCTTCACAGGAGACTCACATGCACAAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGGCCTTCTTGGACATCTTCACAGGAGACTCACATGCACAAAG  974

seq1  CAATACACACACACATACAAATTAGTAAGAGGAAAACTGTTTTTATTGAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACACACACACATACAAATTAGTAAGAGGAAAACTGTTTTTATTGAA  1024

seq1  AATAATTCTATATAATGTCTCTCATAGGCAATGATATTTACCCACTAAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCTATATAATGTCTCTCATAGGCAATGATATTTACCCACTAAAG  1074

seq1  TTGAGAATATAATTATTGTTTGTTTCATTATAATAGTCATACTCACTCTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATATAATTATTGTTTGTTTCATTATAATAGTCATACTCACTCTT  1124

seq1  TTTCACAGAGCTTTATTGTCTAGAATGCTGAAAACAGGCTGATATTTACT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAGCTTTATTGTCTAGAATGCTGAAAACAGGCTGATATTTACT  1174

seq1  CTTCATATTTGATGTTCTTTTGGAAATAACAAATA  1231
      |||||||||||||||||||||||||||||||||||
seq2  CTTCATATTTGATGTTCTTTTGGAAATAACAAATA  1209


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