BAC Information

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BAC

Clone NameB6Ng01-214C13
Chromosome2 (Build37)
Map Location 164,868,218 - 164,869,073
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC381404, Tomm34, Stk4, Kcns1, Wfdc5, Wfdc12, Wfdc15a, Wfdc15b, Svs2, Svs3b, Svs4, Svs3a, Svs6, Svs5, Slpi, Matn4, Rbpjl, Sdc4, 2610042O14Rik, 1700126L10Rik, Dbndd2, Pigt, LOC670507, Wfdc2, OTTMUSG00000016288, Wfdc6a, Spinlw1, Wfdc8, Wfdc6b, Wfdc16, OTTMUSG00000001088, Wfdc10, LOC629761, Wfdc13, Spint4, OTTMUSG00000016293, Wfdc3, Dnttip1, Ube2c, Tnnc2, Snx21, Acot8, Zswim3, Zswim1, 1700020C07Rik, Neurl2, Ctsa, Pltp, F730014I05Rik, Zfp335, LOC629777, Mmp9, Slc12a5, Ncoa5
Downstream geneCd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10, Eya2, Prkcbp1, LOC546780, Ncoa3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214C13.b
ACCGA031484
length855
definitionB6Ng01-214C13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgctccctcttatggtgcaacattgttaatagtcaggattt
gaactcatgtcattgagacttcaaagccctcttgttctactgtaccttgt
ggctttttttttttttttttttttaaatgggaataccatggaaacgtacc
ctgggtgagttgatggttggccatgtgtatggctgcggcgggtgtggctg
tgtcatccctcaggattagatgatatggaaagaaataactacttttctca
ttcctgttgtggagtcacatgcgagcaggtgagaaatacacactatcata
aggagaactccattagcccccattgtttagacagaagagtcaaaagtaag
aagcaggagataaaagagctcacaaggaagcagttctctgttgggctccc
gctgaaacagaaagaaacggctctgtttcacaacagttagtgatgagcta
cacgagatgaaagtcgtcttgtgacccgtgagtgtaatgagatgaagatg
aggtaatgtgatgttttataacgatagaggatctgaggagctgggaatta
tctcagcgtgaatgactactaccaggaagctgaacaatgggaccgtctgg
aagcaattctctattcagccgtatttatagcgccattcatcttctctttc
agttcagaggtcaccggggcgcttgtctcaccttgccgagtatatgaaaa
tacagcgcttgtcacagtcccgactgcttccttccgcggaacctgtcaca
tacaaaggagagagagagagagagagagagagagagagagagagatagag
agtcagagctctccagagcagtgaatgaatagctctggctgaaaaaagag
aggga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_164868218_164869073
seq2: B6Ng01-214C13.b_40_894

seq1  GAATTCATTCTGCTCCCTCTTATGGTGCAACATTGTTAATAGTCAGGATT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTC-TTCTGCTCCCTCTTATGGTGCAACATTGTTAATAGTCAGGATT  49

seq1  TGAACTCATGTCATTGAGACTTCAAAGCCCTCTTGTTCTACTGTACCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCATGTCATTGAGACTTCAAAGCCCTCTTGTTCTACTGTACCTTG  99

seq1  TGGCTTTTTTTTTTTTTTTTTTTTTAAATGGGAATACCATGGAAACGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGCTTTTTTTTTTTTTTTTTTTTTAAATGGGAATACCATGGAAACGTAC  149

seq1  CCTGGGTGAGTTGATGGTTGGCCATGTGTATGGCTGCAGCAAGTGTGGCT  200
      ||||||||||||||||||||||||||||||||||||| ||  ||||||||
seq2  CCTGGGTGAGTTGATGGTTGGCCATGTGTATGGCTGCGGCGGGTGTGGCT  199

seq1  GTGTCATCCCTCAGGATTAGATGATATGGAAAGAAATAACTACTTTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATCCCTCAGGATTAGATGATATGGAAAGAAATAACTACTTTTCTC  249

seq1  ATTCCTGTTGTGGAGTCACATGCGAGCAGGTGAGAAATACACACTATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTTGTGGAGTCACATGCGAGCAGGTGAGAAATACACACTATCAT  299

seq1  AAGGAGAACTCCATTAGCCCCCATTGTTTAGACAGAAGAGTCAAAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAACTCCATTAGCCCCCATTGTTTAGACAGAAGAGTCAAAAGTAA  349

seq1  GAAGCAGGAGATAAAAGAGCTCACAAGGAAGCAGTTCTCTGTTGGGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGAGATAAAAGAGCTCACAAGGAAGCAGTTCTCTGTTGGGCTCC  399

seq1  CGCTGAAACAGAAAGAAACGGCTCTGTTTCACAACAGTTAGTGATGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAAACAGAAAGAAACGGCTCTGTTTCACAACAGTTAGTGATGAGCT  449

seq1  ACACGAGATGAAAGTCGTCTTGTGACCCGTGAGTGTAATGAGATGAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGATGAAAGTCGTCTTGTGACCCGTGAGTGTAATGAGATGAAGAT  499

seq1  GAGGTAATGTGATGTTTTATAACGATAGAGGATCTGAGGAGCTGGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATGTGATGTTTTATAACGATAGAGGATCTGAGGAGCTGGGAATT  549

seq1  ATCTCAGCGTGAATGACTACTACCAGGAAGCTGAACAATGGGACCGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCGTGAATGACTACTACCAGGAAGCTGAACAATGGGACCGTCTG  599

seq1  GAAGCAATTCTCTATTCAGCCGTATTTATAGCGCCATTCATCTTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATTCTCTATTCAGCCGTATTTATAGCGCCATTCATCTTCTCTTT  649

seq1  CAGTTCAGAGGTCACCGGGGCGCTTGTCTCACCTTGCCGAGTATATGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGAGGTCACCGGGGCGCTTGTCTCACCTTGCCGAGTATATGAAA  699

seq1  ATACAGCGCTTGTCACAGTCCCGACTGCTTCCTTCCGCGGAACCTGTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCGCTTGTCACAGTCCCGACTGCTTCCTTCCGCGGAACCTGTCAC  749

seq1  ATACAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATACAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGA  799

seq1  GAGGCAGAGCTCTCCAGAGCAGGGAATGAATAGCTCTGGCTGAAAGAAGA  850
      ||| |||||||||||||||||| |||||||||||||||||||||| ||||
seq2  GAGTCAGAGCTCTCCAGAGCAGTGAATGAATAGCTCTGGCTGAAAAAAGA  849

seq1  GAGGGA  856
      ||||||
seq2  GAGGGA  855