BAC Information

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BAC

Clone NameB6Ng01-214D19
Chromosome2 (Build37)
Map Location 52,277,595 - 52,278,249
singlet/doubletsinglet
Overlap geneArl5a
Upstream geneLOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb, LOC100041670
Downstream geneCacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6, LOC666872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214D19.b
ACCGA031541
length864
definitionB6Ng01-214D19.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtctgcactctagatgttaatcccttacctgtggaaaagggg
gcacagccctctctgagtcttcactgctttgatatctctgcgatcctaca
actgatctctactctttcctgaatgactgagttccttctctttggggctt
gcacatttgctcttaatgtgtatgtgagaatggacaggtgtgtgggtgcg
cgtgtgtgtgctgctcaattaaagctgagctggtgaactgcttgctgggc
ccagaaaaccagagctatgtttaggtggggcacagattccggagcgctca
aactttattctagatactgccatttattgacaccattaaaaagtattgta
gctggggctgtagcttagttggtagagggcctgcctccctttcaccacac
ccattcaagagataacgggatgtggtggtggggtcccctgtgatcctgtc
acgtaggatgcacgtccttggttacatagtaaagttaaggccaacctggg
ctaacatgagattctgtctccgaatattttcctggaagagaggaagcagg
ctcgagtgacttctgtcagacaattgggaaaggaaacaagtgtgttgatg
cttgttgatctttttaagaagccactgtcagcttttctgtcccctctttt
ctccctgttgactgagttgtgaatctttagcttagatttaggtttgccaa
caatgactgtatctctagaacttgttaccagtgtttggtttaaatacctt
tctagggcagcagttctcaacctgtgggtctcaatctctaagaccatggg
aaatcattgatttttttttacttttataacagtagcaaattatagttatg
gagtagtaaccaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_52277595_52278249
seq2: B6Ng01-214D19.b_248_902 (reverse)

seq1  TTTTGTTACTACTCCATAACTATAATTTTGCTACTGTTATAAAAGT-AAA  49
      ||| ||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTTGGTTACTACTCCATAACTATAA-TTTGCTACTGTTATAAAAGTAAAA  49

seq1  AAAAATCAATGATTTCCCATGGTCTTAGAGATTGAGACCCACAGGTTGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAATGATTTCCCATGGTCTTAGAGATTGAGACCCACAGGTTGAG  99

seq1  AACTGCTGCCCTAGAAAGGTATTTAAACCAAACACTGGTAACAAGTTCTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGCCCTAGAAAGGTATTTAAACCAAACACTGGTAACAAGTTCTA  149

seq1  GAGATACAGTCATTGTTGGCAAACCTAAATCTAAGCTAAAGATTCACAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAGTCATTGTTGGCAAACCTAAATCTAAGCTAAAGATTCACAAC  199

seq1  TCAGTCAACAGGGAGAAAAGAGGGGACAGAAAAGCTGACAGTGGCTTCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAACAGGGAGAAAAGAGGGGACAGAAAAGCTGACAGTGGCTTCTT  249

seq1  AAAAAGATCAACAAGCATCAACACACTTGTTTCCTTTCCCAATTGTCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATCAACAAGCATCAACACACTTGTTTCCTTTCCCAATTGTCTGA  299

seq1  CAGAAGTCACTCGAGCCTGCTTCCTCTCTTCCAGGAAAATATTCGGAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCACTCGAGCCTGCTTCCTCTCTTCCAGGAAAATATTCGGAGAC  349

seq1  AGAATCTCATGTTAGCCCAGGTTGGCCTTAACTTTACTATGTAACCAAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCATGTTAGCCCAGGTTGGCCTTAACTTTACTATGTAACCAAGG  399

seq1  ACGTGCATCCTACGTGACAGGATCACAGGGGACCCCACCACCACATCCCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATCCTACGTGACAGGATCACAGGGGACCCCACCACCACATCCCG  449

seq1  TTATCTCTTGAATGGGTGTGGTGAAAGGGAGGCAGGCCCTCTACCAACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTTGAATGGGTGTGGTGAAAGGGAGGCAGGCCCTCTACCAACTA  499

seq1  AGCTACAGCCCCAGCTACAATACTTTTTAATGGTGTCAATAAATGGCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGCCCCAGCTACAATACTTTTTAATGGTGTCAATAAATGGCAGT  549

seq1  ATCTAGAATAAAGTTTGAGCGCTCCGGAATCTGTGCCCCACCTAAACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAATAAAGTTTGAGCGCTCCGGAATCTGTGCCCCACCTAAACATA  599

seq1  GCTCTGGTTTTCTGGGCCCAGCAAGCAGTTCACCAGCTCAGCTTTAATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGTTTTCTGGGCCCAGCAAGCAGTTCACCAGCTCAGCTTTAATTG  649

seq1  AGCAGC  655
      ||||||
seq2  AGCAGC  655